Gene annotation
Transcriptome id Sobic.004G014000.1
Synonym Sb04g001360
Functional annotation serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed
UniProt C5XSC9
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF103
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G17220 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g02600.1 : serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a056803 , Zm00025a018394 , Zm00025a018543 , Zm00025a041769 , Zm00025a018728 , Zm00025a000914 , Zm00025a024121 , Zm00025a032271 , Zm00025a053364 , Zm00025a035043 , Zm00025a004825
Brachypodium KQJ92935 , KQJ92936 , KQK07880
Barley HORVU6Hr1G010050.8 , HORVU6Hr1G010050.9 , HORVU6Hr1G010050.6 , HORVU6Hr1G010050.7 , HORVU6Hr1G010050.4 , HORVU6Hr1G010050.5 , HORVU6Hr1G010050.3 , HORVU6Hr1G010050.1 , HORVU6Hr1G064690.7 , HORVU6Hr1G064690.6 , HORVU6Hr1G064690.5 , HORVU6Hr1G064690.4 , HORVU6Hr1G064690.3 , HORVU6Hr1G064690.2 , HORVU6Hr1G064690.9 , HORVU6Hr1G064690.8 , HORVU6Hr1G009900.8 , HORVU6Hr1G009900.6 , HORVU6Hr1G009900.7 , HORVU6Hr1G009900.4 , HORVU6Hr1G009900.5 , HORVU6Hr1G009900.2 , HORVU6Hr1G009900.3 , HORVU6Hr1G010050.14 , HORVU6Hr1G010050.15 , HORVU6Hr1G010050.16 , HORVU6Hr1G010050.10 , HORVU6Hr1G010050.11 , HORVU6Hr1G010050.12 , HORVU6Hr1G010050.13 , HORVU6Hr1G064690.15 , HORVU6Hr1G064690.14 , HORVU6Hr1G064690.13 , HORVU6Hr1G064690.12 , HORVU6Hr1G064690.11 , HORVU6Hr1G064690.10 , HORVU0Hr1G039910.2
Wheat TraesCS6D02G235300 , TraesCSU02G105900 , TraesCS6B02G069800 , TraesCS6B02G271700 , TraesCS6A02G253700 , TraesCSU02G111800 , TraesCSU02G111800 , TraesCS4B02G294300 , TraesCS6A02G052100 , TraesCS6A02G052100 , TraesCS4D02G293200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G352900 expressed protein -
2 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
5 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
6 Sobic.008G097401 - -
7 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
8 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
9 Sobic.001G294000 LOL3, putative, expressed -
10 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
11 Sobic.009G218800 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
12 Sobic.002G427900 wound-induced protein WI12, putative, expressed -
13 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
14 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
15 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
16 Sobic.001G536500 expressed protein -
17 Sobic.004G272300 expressed protein -
18 Sobic.010G250600 expressed protein -
19 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
20 Sobic.007G079700 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic004G014000 Sobic004G014000 Sobic004G352900 Sobic004G352900 Sobic004G014000--Sobic004G352900 Sobic003G116700 Sobic003G116700 Sobic004G014000--Sobic003G116700 Sobic009G249000 Sobic009G249000 Sobic004G014000--Sobic009G249000 Sobic004G172700 Sobic004G172700 Sobic004G014000--Sobic004G172700 Sobic010G194900 Sobic010G194900 Sobic004G014000--Sobic010G194900 Sobic008G097401 Sobic008G097401 Sobic004G014000--Sobic008G097401 Sobic009G156300 Sobic009G156300 Sobic004G014000--Sobic009G156300 Sobic005G228000 Sobic005G228000 Sobic004G014000--Sobic005G228000 Sobic001G294000 Sobic001G294000 Sobic004G014000--Sobic001G294000 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic004G352900--Sobic009G156300 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic009G131100 Sobic009G131100 Sobic004G352900--Sobic009G131100 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic001G149700 Sobic001G149700 Sobic003G116700--Sobic001G149700 Sobic001G441600 Sobic001G441600 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic005G092800 Sobic005G092800 Sobic009G249000--Sobic005G092800 Sobic004G157800 Sobic004G157800 Sobic009G249000--Sobic004G157800 Sobic009G249000--Sobic004G172700 Sobic009G249000--Sobic004G352900 Sobic010G062800 Sobic010G062800 Sobic009G249000--Sobic010G062800 Sobic009G249000--Sobic004G014000 Sobic001G403700 Sobic001G403700 Sobic009G249000--Sobic001G403700 Sobic002G078400 Sobic002G078400 Sobic009G249000--Sobic002G078400 Sobic008G132800 Sobic008G132800 Sobic009G249000--Sobic008G132800 Sobic009G016201 Sobic009G016201 Sobic004G172700--Sobic009G016201 Sobic010G144400 Sobic010G144400 Sobic004G172700--Sobic010G144400 Sobic002G282400 Sobic002G282400 Sobic004G172700--Sobic002G282400 Sobic002G261800 Sobic002G261800 Sobic004G172700--Sobic002G261800 Sobic003G249800 Sobic003G249800 Sobic004G172700--Sobic003G249800 Sobic007G126100 Sobic007G126100 Sobic004G172700--Sobic007G126100 Sobic007G095400 Sobic007G095400 Sobic004G172700--Sobic007G095400 Sobic002G328300 Sobic002G328300 Sobic004G172700--Sobic002G328300 Sobic001G064800 Sobic001G064800 Sobic004G172700--Sobic001G064800 Sobic010G194900--Sobic009G131100 Sobic010G194900--Sobic005G228000 Sobic003G135700 Sobic003G135700 Sobic010G194900--Sobic003G135700 Sobic009G094450 Sobic009G094450 Sobic010G194900--Sobic009G094450 Sobic006G246100 Sobic006G246100 Sobic010G194900--Sobic006G246100 Sobic010G194900--Sobic001G536500 Sobic004G010300 Sobic004G010300 Sobic010G194900--Sobic004G010300 Sobic010G194900--Sobic004G014000 Sobic010G194900--Sobic004G352900 Sobic002G296300 Sobic002G296300 Sobic008G097401--Sobic002G296300 Sobic009G198500 Sobic009G198500 Sobic008G097401--Sobic009G198500 Sobic008G097401--Sobic001G078500 Sobic010G121300 Sobic010G121300 Sobic008G097401--Sobic010G121300 Sobic004G339200 Sobic004G339200 Sobic008G097401--Sobic004G339200 Sobic008G097401--Sobic001G403700 Sobic004G300900 Sobic004G300900 Sobic008G097401--Sobic004G300900 Sobic008G097401--Sobic002G078400 Sobic003G124800 Sobic003G124800 Sobic008G097401--Sobic003G124800 Sobic009G156300--Sobic002G117200 Sobic009G156300--Sobic004G352900 Sobic001G285000 Sobic001G285000 Sobic009G156300--Sobic001G285000 Sobic009G156300--Sobic010G066300 Sobic009G156300--Sobic009G131100 Sobic004G060600 Sobic004G060600 Sobic009G156300--Sobic004G060600 Sobic009G156300--Sobic002G254650 Sobic009G156300--Sobic002G427900 Sobic010G065400 Sobic010G065400 Sobic009G156300--Sobic010G065400 Sobic001G019900 Sobic001G019900 Sobic005G228000--Sobic001G019900 Sobic002G212200 Sobic002G212200 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic002G345300 Sobic002G345300 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic006G150600 Sobic006G150600 Sobic001G294000--Sobic006G150600 Sobic001G294000--Sobic003G124800 Sobic001G294000--Sobic009G198500 Sobic001G294000--Sobic008G132800 Sobic001G294000--Sobic010G065400 Sobic004G272300 Sobic004G272300 Sobic001G294000--Sobic004G272300 Sobic001G294000--Sobic009G016201 Sobic004G066800 Sobic004G066800 Sobic001G294000--Sobic004G066800 Sobic001G294000--Sobic002G078400
Octagon: transcription factors


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