Gene annotation
Transcriptome id Sobic.003G116700.1
Synonym Sb03g009830
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5XFU9
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF766
NCBI CDD KOG4178; Soluble epoxide hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02340 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g15130.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023954
Brachypodium KQK03648 , PNT70277 , KQK12347 , KQJ85620
Barley HORVU5Hr1G115720.4 , HORVU7Hr1G075860.1 , HORVU5Hr1G115720.5 , HORVU5Hr1G115720.3 , HORVU5Hr1G115720.2 , HORVU3Hr1G035400.4 , HORVU3Hr1G035400.1 , HORVU3Hr1G035400.2 , HORVU5Hr1G115800.1
Wheat TraesCS7D02G224000 , TraesCS3B02G204900 , TraesCS3A02G175200 , TraesCS3A02G175200 , TraesCS5D02G507000 , TraesCS5B02G507200 , TraesCS4A02G366100 , TraesCS3D02G180600 , TraesCS7B02G128800 , TraesCS4A02G366000
Populus -


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cDNA sequences
Sobic.003G116700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G206000 acyltransferase, putative, expressed K00655: 1-acyl-sn-glycerol-3-phosphate acyltransferase
2 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
3 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
4 Sobic.007G079700 pentatricopeptide, putative, expressed -
5 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
6 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
7 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
9 Sobic.001G078500 expressed protein -
10 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
11 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
12 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
13 Sobic.001G420700 clathrin assembly protein, putative, expressed -
14 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
15 Sobic.010G144400 glycosyltransferase, putative, expressed -
16 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
17 Sobic.001G253600 expressed protein -
18 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
19 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
20 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic003G116700 Sobic003G116700 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic001G149700 Sobic001G149700 Sobic003G116700--Sobic001G149700 Sobic001G441600 Sobic001G441600 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic001G206000--Sobic003G116700 Sobic001G206000--Sobic001G149700 Sobic001G206000--Sobic009G065000 Sobic001G206000--Sobic010G055500 Sobic001G281700 Sobic001G281700 Sobic001G206000--Sobic001G281700 Sobic004G231400 Sobic004G231400 Sobic001G206000--Sobic004G231400 Sobic003G317200 Sobic003G317200 Sobic001G206000--Sobic003G317200 Sobic010G071200 Sobic010G071200 Sobic001G206000--Sobic010G071200 Sobic001G206000--Sobic007G079700 Sobic001G149700--Sobic010G071200 Sobic001G149700--Sobic010G055500 Sobic001G149700--Sobic004G231400 Sobic001G478300 Sobic001G478300 Sobic001G149700--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic001G149700--Sobic006G257900 Sobic008G142700 Sobic008G142700 Sobic001G149700--Sobic008G142700 Sobic003G273100 Sobic003G273100 Sobic001G149700--Sobic003G273100 Sobic001G076000 Sobic001G076000 Sobic001G149700--Sobic001G076000 Sobic001G512900 Sobic001G512900 Sobic001G149700--Sobic001G512900 Sobic001G441600--Sobic003G116700 Sobic008G161000 Sobic008G161000 Sobic001G441600--Sobic008G161000 Sobic001G335400 Sobic001G335400 Sobic001G441600--Sobic001G335400 Sobic009G016201 Sobic009G016201 Sobic001G441600--Sobic009G016201 Sobic003G396000 Sobic003G396000 Sobic001G441600--Sobic003G396000 Sobic009G152200 Sobic009G152200 Sobic001G441600--Sobic009G152200 Sobic003G115800 Sobic003G115800 Sobic001G441600--Sobic003G115800 Sobic001G441600--Sobic010G071200 Sobic001G441600--Sobic003G317200 Sobic009G114800 Sobic009G114800 Sobic007G079700--Sobic009G114800 Sobic006G054500 Sobic006G054500 Sobic007G079700--Sobic006G054500 Sobic006G262900 Sobic006G262900 Sobic007G079700--Sobic006G262900 Sobic002G273900 Sobic002G273900 Sobic007G079700--Sobic002G273900 Sobic009G199700 Sobic009G199700 Sobic007G079700--Sobic009G199700 Sobic007G079700--Sobic003G116700 Sobic004G301900 Sobic004G301900 Sobic007G079700--Sobic004G301900 Sobic004G253000 Sobic004G253000 Sobic007G079700--Sobic004G253000 Sobic004G272300 Sobic004G272300 Sobic007G079700--Sobic004G272300 Sobic004G352900 Sobic004G352900 Sobic004G014000--Sobic004G352900 Sobic004G014000--Sobic003G116700 Sobic009G249000 Sobic009G249000 Sobic004G014000--Sobic009G249000 Sobic004G172700 Sobic004G172700 Sobic004G014000--Sobic004G172700 Sobic010G194900 Sobic010G194900 Sobic004G014000--Sobic010G194900 Sobic008G097401 Sobic008G097401 Sobic004G014000--Sobic008G097401 Sobic009G156300 Sobic009G156300 Sobic004G014000--Sobic009G156300 Sobic005G228000 Sobic005G228000 Sobic004G014000--Sobic005G228000 Sobic001G294000 Sobic001G294000 Sobic004G014000--Sobic001G294000 Sobic007G126200--Sobic001G149700 Sobic007G126200--Sobic010G071200 Sobic009G036900 Sobic009G036900 Sobic007G126200--Sobic009G036900 Sobic007G126200--Sobic003G273100 Sobic007G126200--Sobic004G231400 Sobic007G126200--Sobic010G055500 Sobic007G126200--Sobic003G116700 Sobic002G068300 Sobic002G068300 Sobic007G126200--Sobic002G068300 Sobic001G350501 Sobic001G350501 Sobic007G126200--Sobic001G350501 Sobic004G164500 Sobic004G164500 Sobic009G065000--Sobic004G164500 Sobic001G311000 Sobic001G311000 Sobic009G065000--Sobic001G311000 Sobic009G065000--Sobic001G206000 Sobic008G106800 Sobic008G106800 Sobic009G065000--Sobic008G106800 Sobic009G065000--Sobic006G257900 Sobic001G471900 Sobic001G471900 Sobic009G065000--Sobic001G471900 Sobic007G177100 Sobic007G177100 Sobic009G065000--Sobic007G177100 Sobic010G228600 Sobic010G228600 Sobic009G065000--Sobic010G228600 Sobic009G065000--Sobic003G116700 Sobic010G055500--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic010G168600 Sobic010G168600 Sobic001G078500--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic001G078500--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic001G078500--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G078500--Sobic006G263900 Sobic004G339200 Sobic004G339200 Sobic001G078500--Sobic004G339200 Sobic010G083700 Sobic010G083700 Sobic001G078500--Sobic010G083700 Sobic009G246950 Sobic009G246950 Sobic001G078500--Sobic009G246950 Sobic007G186300 Sobic007G186300 Sobic001G078500--Sobic007G186300 Sobic002G400000 Sobic002G400000 Sobic001G078500--Sobic002G400000
Octagon: transcription factors


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