Gene annotation
Transcriptome id Sobic.001G078500.1
Synonym Sb01g007090
Functional annotation expressed protein
UniProt C5WZA5
Pfam -
Panther DB PTHR34454 PTHR34454:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47310 : -
RAP-DB (Rice) LOC_Os03g55630.1 : expressed protein
MaizeGDB (Corn) Zm00025a016726
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
2 Sobic.009G171700 SAG20, putative, expressed -
3 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
4 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
5 Sobic.004G339200 CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed -
6 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
7 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
8 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
9 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.003G295400 MAC/Perforin domain containing protein, putative, expressed -
11 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
12 Sobic.010G253800 expressed protein -
13 Sobic.002G129000 RING zinc finger protein, putative, expressed -
14 Sobic.002G296300 expressed protein -
15 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
16 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
17 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
18 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
19 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
20 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4


Gene co-expression network
sample Sobic001G078500 Sobic001G078500 Sobic010G168600 Sobic010G168600 Sobic001G078500--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic001G078500--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic001G078500--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G078500--Sobic006G263900 Sobic004G339200 Sobic004G339200 Sobic001G078500--Sobic004G339200 Sobic010G083700 Sobic010G083700 Sobic001G078500--Sobic010G083700 Sobic009G246950 Sobic009G246950 Sobic001G078500--Sobic009G246950 Sobic007G186300 Sobic007G186300 Sobic001G078500--Sobic007G186300 Sobic002G400000 Sobic002G400000 Sobic001G078500--Sobic002G400000 Sobic010G168600--Sobic010G083700 Sobic010G168600--Sobic001G078500 Sobic010G168600--Sobic009G246950 Sobic002G352700 Sobic002G352700 Sobic010G168600--Sobic002G352700 Sobic010G168600--Sobic006G263900 Sobic010G168600--Sobic003G007500 Sobic010G168600--Sobic009G171700 Sobic002G256300 Sobic002G256300 Sobic010G168600--Sobic002G256300 Sobic004G104900 Sobic004G104900 Sobic010G168600--Sobic004G104900 Sobic009G171700--Sobic001G078500 Sobic009G171700--Sobic010G168600 Sobic009G171700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic009G171700--Sobic004G293700 Sobic009G171700--Sobic010G083700 Sobic010G253800 Sobic010G253800 Sobic009G171700--Sobic010G253800 Sobic008G180900 Sobic008G180900 Sobic009G171700--Sobic008G180900 Sobic009G171700--Sobic007G186300 Sobic009G171700--Sobic002G256300 Sobic003G007500--Sobic007G186300 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300 Sobic006G263900--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic006G263900--Sobic001G054200 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic006G263900--Sobic010G253800 Sobic006G263900--Sobic009G246950 Sobic006G263900--Sobic003G007500 Sobic004G339200--Sobic001G078500 Sobic004G339200--Sobic002G400000 Sobic004G339200--Sobic010G168600 Sobic004G339200--Sobic009G171700 Sobic004G339200--Sobic003G007500 Sobic009G198500 Sobic009G198500 Sobic004G339200--Sobic009G198500 Sobic001G433400 Sobic001G433400 Sobic004G339200--Sobic001G433400 Sobic001G439600 Sobic001G439600 Sobic004G339200--Sobic001G439600 Sobic004G339200--Sobic007G186300 Sobic010G083700--Sobic006G263900 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic010G083700--Sobic004G293700 Sobic010G083700--Sobic010G253800 Sobic010G083700--Sobic002G256300 Sobic010G083700--Sobic003G007500 Sobic009G246950--Sobic002G256300 Sobic007G203700 Sobic007G203700 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic009G246950--Sobic010G083700 Sobic009G246950--Sobic001G054200 Sobic009G246950--Sobic007G186300 Sobic009G246950--Sobic009G171700 Sobic009G246950--Sobic008G180900 Sobic009G246950--Sobic001G007200 Sobic007G186300--Sobic003G007500 Sobic007G186300--Sobic001G054200 Sobic003G115800 Sobic003G115800 Sobic007G186300--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic007G186300--Sobic003G248600 Sobic007G186300--Sobic001G007200 Sobic007G186300--Sobic009G246950 Sobic007G186300--Sobic010G083700 Sobic009G146100 Sobic009G146100 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200 Sobic007G168600 Sobic007G168600 Sobic002G400000--Sobic007G168600 Sobic003G077900 Sobic003G077900 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic004G130900 Sobic004G130900 Sobic002G400000--Sobic004G130900 Sobic002G400000--Sobic001G433400 Sobic002G400000--Sobic001G395400 Sobic004G327300 Sobic004G327300 Sobic002G400000--Sobic004G327300 Sobic009G004600 Sobic009G004600 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900
Octagon: transcription factors


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