Gene annotation
Transcriptome id Sobic.004G339200.1
Synonym ADK1, CKL9ALPHA, CKL9BETA
Functional annotation CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed
UniProt A0A194YT20
Pfam PF00069
Panther DB PTHR11909 PTHR11909:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G43320 : casein kinase I-like 8
RAP-DB (Rice) LOC_Os02g56560.1 : CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) Zm00025a022549 , Zm00025a032840
Brachypodium KQK00394 , KQK01276
Barley HORVU6Hr1G058230.10 , HORVU6Hr1G058230.11 , HORVU6Hr1G058230.12 , HORVU6Hr1G058230.13 , HORVU6Hr1G088800.12 , HORVU6Hr1G088800.13 , HORVU6Hr1G088800.10 , HORVU6Hr1G088800.11 , HORVU6Hr1G058230.6 , HORVU6Hr1G058230.7 , HORVU6Hr1G058230.4 , HORVU6Hr1G058230.5 , HORVU6Hr1G058230.2 , HORVU6Hr1G058230.3 , HORVU6Hr1G058230.1 , HORVU6Hr1G058230.8 , HORVU6Hr1G058230.9 , HORVU1Hr1G094920.11 , HORVU1Hr1G094920.10 , HORVU6Hr1G088800.4 , HORVU6Hr1G088800.5 , HORVU6Hr1G088800.6 , HORVU6Hr1G088800.1 , HORVU6Hr1G088800.2 , HORVU6Hr1G088800.3 , HORVU6Hr1G088800.9 , HORVU1Hr1G094920.6 , HORVU1Hr1G094920.8 , HORVU1Hr1G094920.1 , HORVU1Hr1G094920.3 , HORVU1Hr1G094920.2 , HORVU1Hr1G094920.5 , HORVU1Hr1G094920.7 , HORVU1Hr1G094920.9
Wheat TraesCS6D02G362500 , TraesCS6D02G362500 , TraesCS6B02G415700 , TraesCS6B02G415700 , TraesCS6A02G378000 , TraesCS6A02G378000 , TraesCS6D02G210400 , TraesCS6A02G225600 , TraesCS6B02G256000
Populus PNT33379 , PNT43593 , PNT43592 , PNT33383 , PNT33382 , PNT33381 , PNT33380 , PNT33384


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cDNA sequences
Sobic.004G339200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G078500 expressed protein -
2 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
4 Sobic.009G171700 SAG20, putative, expressed -
5 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
6 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
7 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
9 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
10 Sobic.001G421700 oxysterol-binding protein, putative, expressed -
11 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
13 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
14 Sobic.002G296300 expressed protein -
15 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
16 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
17 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
18 Sobic.009G174900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
19 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
20 Sobic.002G261900 arabinogalactan protein, putative, expressed -


Gene co-expression network
sample Sobic004G339200 Sobic004G339200 Sobic001G078500 Sobic001G078500 Sobic004G339200--Sobic001G078500 Sobic002G400000 Sobic002G400000 Sobic004G339200--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic004G339200--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic004G339200--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic004G339200--Sobic003G007500 Sobic009G198500 Sobic009G198500 Sobic004G339200--Sobic009G198500 Sobic001G433400 Sobic001G433400 Sobic004G339200--Sobic001G433400 Sobic001G439600 Sobic001G439600 Sobic004G339200--Sobic001G439600 Sobic007G186300 Sobic007G186300 Sobic004G339200--Sobic007G186300 Sobic001G078500--Sobic010G168600 Sobic001G078500--Sobic009G171700 Sobic001G078500--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G078500--Sobic006G263900 Sobic001G078500--Sobic004G339200 Sobic010G083700 Sobic010G083700 Sobic001G078500--Sobic010G083700 Sobic009G246950 Sobic009G246950 Sobic001G078500--Sobic009G246950 Sobic001G078500--Sobic007G186300 Sobic001G078500--Sobic002G400000 Sobic007G168600 Sobic007G168600 Sobic002G400000--Sobic007G168600 Sobic003G077900 Sobic003G077900 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic004G130900 Sobic004G130900 Sobic002G400000--Sobic004G130900 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic004G327300 Sobic004G327300 Sobic002G400000--Sobic004G327300 Sobic009G004600 Sobic009G004600 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900 Sobic010G168600--Sobic010G083700 Sobic010G168600--Sobic001G078500 Sobic010G168600--Sobic009G246950 Sobic002G352700 Sobic002G352700 Sobic010G168600--Sobic002G352700 Sobic010G168600--Sobic006G263900 Sobic010G168600--Sobic003G007500 Sobic010G168600--Sobic009G171700 Sobic002G256300 Sobic002G256300 Sobic010G168600--Sobic002G256300 Sobic004G104900 Sobic004G104900 Sobic010G168600--Sobic004G104900 Sobic009G171700--Sobic001G078500 Sobic009G171700--Sobic010G168600 Sobic009G171700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic009G171700--Sobic004G293700 Sobic009G171700--Sobic010G083700 Sobic010G253800 Sobic010G253800 Sobic009G171700--Sobic010G253800 Sobic008G180900 Sobic008G180900 Sobic009G171700--Sobic008G180900 Sobic009G171700--Sobic007G186300 Sobic009G171700--Sobic002G256300 Sobic003G007500--Sobic007G186300 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300 Sobic004G272300 Sobic004G272300 Sobic009G198500--Sobic004G272300 Sobic003G124800 Sobic003G124800 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic002G078400 Sobic002G078400 Sobic009G198500--Sobic002G078400 Sobic004G300900 Sobic004G300900 Sobic009G198500--Sobic004G300900 Sobic001G005900 Sobic001G005900 Sobic009G198500--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100 Sobic002G045300 Sobic002G045300 Sobic001G433400--Sobic002G045300 Sobic001G433400--Sobic002G400000 Sobic003G367451 Sobic003G367451 Sobic001G433400--Sobic003G367451 Sobic009G146100 Sobic009G146100 Sobic001G433400--Sobic009G146100 Sobic009G135600 Sobic009G135600 Sobic001G433400--Sobic009G135600 Sobic003G253000 Sobic003G253000 Sobic001G433400--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic001G433400--Sobic003G220600 Sobic001G433400--Sobic004G327300 Sobic001G433400--Sobic007G186300 Sobic001G439600--Sobic003G124800 Sobic002G129000 Sobic002G129000 Sobic001G439600--Sobic002G129000 Sobic001G439600--Sobic010G083700 Sobic001G294900 Sobic001G294900 Sobic001G439600--Sobic001G294900 Sobic001G136900 Sobic001G136900 Sobic001G439600--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic001G439600--Sobic001G054200 Sobic001G439600--Sobic010G168600 Sobic001G439600--Sobic002G256300 Sobic001G529000 Sobic001G529000 Sobic001G439600--Sobic001G529000 Sobic007G186300--Sobic003G007500 Sobic007G186300--Sobic001G054200 Sobic003G115800 Sobic003G115800 Sobic007G186300--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic007G186300--Sobic003G248600 Sobic001G007200 Sobic001G007200 Sobic007G186300--Sobic001G007200 Sobic007G186300--Sobic009G246950 Sobic007G186300--Sobic010G083700 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200
Octagon: transcription factors


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