Gene annotation
Transcriptome id Sobic.001G421700.2,Sobic.001G421700.1
Synonym ORP3C, Sb01g039660
Functional annotation oxysterol-binding protein, putative, expressed
UniProt C5WQ05 , A0A1Z5SAJ5
Pfam PF01237
Panther DB PTHR10972
NCBI CDD KOG2209; Oxysterol-binding protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02100 : Oxysterol-binding family protein
RAP-DB (Rice) LOC_Os03g16690.1 : oxysterol-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a010192 , Zm00025a010193 , Zm00025a015951 , Zm00025a037431 , Zm00025a001832 , Zm00025a046860 , Zm00025a052761
Brachypodium KQK22346
Barley HORVU4Hr1G059840.1 , HORVU4Hr1G059840.2
Wheat TraesCS4D02G208700 , TraesCS4B02G207800 , TraesCS4A02G096600
Populus -


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cDNA sequences
Sobic.001G421700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G339200 CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed -
2 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
3 Sobic.008G132800 expressed protein -
4 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
5 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
6 Sobic.003G104700 Rer1 protein, putative, expressed -
7 Sobic.010G008100 RNA recognition motif containing protein, putative, expressed -
8 Sobic.002G296300 expressed protein -
9 Sobic.007G059900 DUF292 domain containing protein, expressed -
10 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
11 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
12 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
13 Sobic.002G428200 26S protease regulatory subunit 4, putative, expressed K03062: PSMC1, 26S proteasome regulatory subunit T2
14 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
15 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
16 Sobic.008G161000 protein kinase domain containing protein, expressed -
17 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
18 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
19 Sobic.002G131900 expressed protein -
20 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2


Gene co-expression network
sample Sobic001G421700 Sobic001G421700 Sobic004G339200 Sobic004G339200 Sobic001G421700--Sobic004G339200 Sobic007G168600 Sobic007G168600 Sobic001G421700--Sobic007G168600 Sobic008G132800 Sobic008G132800 Sobic001G421700--Sobic008G132800 Sobic002G078400 Sobic002G078400 Sobic001G421700--Sobic002G078400 Sobic001G403700 Sobic001G403700 Sobic001G421700--Sobic001G403700 Sobic003G104700 Sobic003G104700 Sobic001G421700--Sobic003G104700 Sobic010G008100 Sobic010G008100 Sobic001G421700--Sobic010G008100 Sobic002G296300 Sobic002G296300 Sobic001G421700--Sobic002G296300 Sobic007G059900 Sobic007G059900 Sobic001G421700--Sobic007G059900 Sobic001G078500 Sobic001G078500 Sobic004G339200--Sobic001G078500 Sobic002G400000 Sobic002G400000 Sobic004G339200--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic004G339200--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic004G339200--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic004G339200--Sobic003G007500 Sobic009G198500 Sobic009G198500 Sobic004G339200--Sobic009G198500 Sobic001G433400 Sobic001G433400 Sobic004G339200--Sobic001G433400 Sobic001G439600 Sobic001G439600 Sobic004G339200--Sobic001G439600 Sobic007G186300 Sobic007G186300 Sobic004G339200--Sobic007G186300 Sobic007G168600--Sobic002G400000 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic001G502200 Sobic001G502200 Sobic007G168600--Sobic001G502200 Sobic003G077900 Sobic003G077900 Sobic007G168600--Sobic003G077900 Sobic010G205300 Sobic010G205300 Sobic007G168600--Sobic010G205300 Sobic003G124800 Sobic003G124800 Sobic007G168600--Sobic003G124800 Sobic001G461900 Sobic001G461900 Sobic007G168600--Sobic001G461900 Sobic001G314500 Sobic001G314500 Sobic007G168600--Sobic001G314500 Sobic010G029400 Sobic010G029400 Sobic008G132800--Sobic010G029400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic001G331900 Sobic001G331900 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic001G105100 Sobic001G105100 Sobic008G132800--Sobic001G105100 Sobic005G157200 Sobic005G157200 Sobic008G132800--Sobic005G157200 Sobic010G065400 Sobic010G065400 Sobic008G132800--Sobic010G065400 Sobic003G217100 Sobic003G217100 Sobic008G132800--Sobic003G217100 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic002G078400--Sobic001G331900 Sobic002G078400--Sobic009G198500 Sobic002G078400--Sobic010G029400 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic001G403700--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic001G403700--Sobic006G182100 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic001G403700--Sobic008G132800 Sobic002G214900 Sobic002G214900 Sobic001G403700--Sobic002G214900 Sobic010G213400 Sobic010G213400 Sobic001G403700--Sobic010G213400 Sobic002G428200 Sobic002G428200 Sobic003G104700--Sobic002G428200 Sobic006G252200 Sobic006G252200 Sobic003G104700--Sobic006G252200 Sobic007G076300 Sobic007G076300 Sobic003G104700--Sobic007G076300 Sobic003G104700--Sobic002G078400 Sobic003G367451 Sobic003G367451 Sobic003G104700--Sobic003G367451 Sobic003G104700--Sobic007G091000 Sobic001G236300 Sobic001G236300 Sobic003G104700--Sobic001G236300 Sobic004G224900 Sobic004G224900 Sobic003G104700--Sobic004G224900 Sobic004G335000 Sobic004G335000 Sobic003G104700--Sobic004G335000 Sobic010G008100--Sobic001G403700 Sobic009G008600 Sobic009G008600 Sobic010G008100--Sobic009G008600 Sobic010G008100--Sobic008G132800 Sobic009G104000 Sobic009G104000 Sobic010G008100--Sobic009G104000 Sobic003G424800 Sobic003G424800 Sobic010G008100--Sobic003G424800 Sobic010G008100--Sobic010G213400 Sobic010G008100--Sobic002G078400 Sobic010G008100--Sobic001G331900 Sobic010G008100--Sobic005G157200 Sobic005G176000 Sobic005G176000 Sobic002G296300--Sobic005G176000 Sobic008G097401 Sobic008G097401 Sobic002G296300--Sobic008G097401 Sobic010G204300 Sobic010G204300 Sobic002G296300--Sobic010G204300 Sobic002G296300--Sobic007G186300 Sobic003G220600 Sobic003G220600 Sobic002G296300--Sobic003G220600 Sobic003G115800 Sobic003G115800 Sobic002G296300--Sobic003G115800 Sobic003G332401 Sobic003G332401 Sobic002G296300--Sobic003G332401 Sobic002G296300--Sobic001G403700 Sobic002G296300--Sobic003G007500 Sobic007G059900--Sobic003G220600 Sobic006G062800 Sobic006G062800 Sobic007G059900--Sobic006G062800 Sobic007G059900--Sobic010G204300 Sobic007G059900--Sobic007G186300 Sobic002G261900 Sobic002G261900 Sobic007G059900--Sobic002G261900 Sobic008G161000 Sobic008G161000 Sobic007G059900--Sobic008G161000 Sobic004G293700 Sobic004G293700 Sobic007G059900--Sobic004G293700 Sobic007G059900--Sobic002G296300 Sobic009G152200 Sobic009G152200 Sobic007G059900--Sobic009G152200
Octagon: transcription factors


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