Gene annotation
Transcriptome id Sobic.002G131900.1
Synonym Sb02g011350
Functional annotation expressed protein
UniProt A0A1B6QAZ1
Pfam -
Panther DB PTHR34937 PTHR34937:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24560 : -
RAP-DB (Rice) LOC_Os09g39200.1 : expressed protein
MaizeGDB (Corn) Zm00025a013513 , Zm00025a045916
Brachypodium KQJ91554
Barley HORVU5Hr1G091910.3 , HORVU5Hr1G091910.2 , HORVU5Hr1G091910.1
Wheat TraesCS5D02G378500 , TraesCS5A02G369000 , TraesCS5B02G371400
Populus -


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cDNA sequences
Sobic.002G131900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257001 - -
2 Sobic.003G400100 leaf senescence related protein, putative, expressed -
3 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
4 Sobic.001G237500 transporter family protein, putative, expressed -
5 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
6 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
7 Sobic.006G034800 neighbor of COX4, putative, expressed -
8 Sobic.003G052400 proline-rich family protein, putative, expressed -
9 Sobic.004G072800 expressed protein -
10 Sobic.001G105100 neighbor of COX4, putative, expressed -
11 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
12 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
14 Sobic.002G301300 SNF7 domain containing protein, putative, expressed K12193: VPS24, charged multivesicular body protein 3
15 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
16 Sobic.003G366500 transport protein particle component, Bet3, domain containing protein, expressed -
17 Sobic.001G420800 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
19 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
20 Sobic.003G153700 expressed protein -


Gene co-expression network
sample Sobic002G131900 Sobic002G131900 Sobic006G257001 Sobic006G257001 Sobic002G131900--Sobic006G257001 Sobic003G400100 Sobic003G400100 Sobic002G131900--Sobic003G400100 Sobic004G274400 Sobic004G274400 Sobic002G131900--Sobic004G274400 Sobic001G237500 Sobic001G237500 Sobic002G131900--Sobic001G237500 Sobic010G105600 Sobic010G105600 Sobic002G131900--Sobic010G105600 Sobic001G067900 Sobic001G067900 Sobic002G131900--Sobic001G067900 Sobic006G034800 Sobic006G034800 Sobic002G131900--Sobic006G034800 Sobic003G052400 Sobic003G052400 Sobic002G131900--Sobic003G052400 Sobic004G072800 Sobic004G072800 Sobic002G131900--Sobic004G072800 Sobic006G257001--Sobic001G067900 Sobic006G257001--Sobic006G034800 Sobic001G105100 Sobic001G105100 Sobic006G257001--Sobic001G105100 Sobic006G257001--Sobic001G237500 Sobic001G041200 Sobic001G041200 Sobic006G257001--Sobic001G041200 Sobic006G257001--Sobic002G131900 Sobic006G257001--Sobic010G105600 Sobic003G217100 Sobic003G217100 Sobic006G257001--Sobic003G217100 Sobic002G301300 Sobic002G301300 Sobic006G257001--Sobic002G301300 Sobic003G400100--Sobic006G034800 Sobic001G261456 Sobic001G261456 Sobic003G400100--Sobic001G261456 Sobic003G400100--Sobic002G131900 Sobic002G313500 Sobic002G313500 Sobic003G400100--Sobic002G313500 Sobic003G400100--Sobic010G105600 Sobic003G400100--Sobic001G067900 Sobic009G226400 Sobic009G226400 Sobic003G400100--Sobic009G226400 Sobic001G371200 Sobic001G371200 Sobic003G400100--Sobic001G371200 Sobic010G017800 Sobic010G017800 Sobic003G400100--Sobic010G017800 Sobic006G148200 Sobic006G148200 Sobic004G274400--Sobic006G148200 Sobic001G323000 Sobic001G323000 Sobic004G274400--Sobic001G323000 Sobic006G225600 Sobic006G225600 Sobic004G274400--Sobic006G225600 Sobic003G002400 Sobic003G002400 Sobic004G274400--Sobic003G002400 Sobic009G219000 Sobic009G219000 Sobic004G274400--Sobic009G219000 Sobic004G274400--Sobic002G131900 Sobic003G312200 Sobic003G312200 Sobic004G274400--Sobic003G312200 Sobic001G206900 Sobic001G206900 Sobic004G274400--Sobic001G206900 Sobic003G007500 Sobic003G007500 Sobic004G274400--Sobic003G007500 Sobic001G237500--Sobic010G105600 Sobic001G237500--Sobic006G257001 Sobic001G237500--Sobic001G105100 Sobic001G237500--Sobic001G067900 Sobic001G237500--Sobic003G217100 Sobic004G222600 Sobic004G222600 Sobic001G237500--Sobic004G222600 Sobic001G237500--Sobic002G131900 Sobic001G237500--Sobic003G052400 Sobic004G132300 Sobic004G132300 Sobic001G237500--Sobic004G132300 Sobic010G105600--Sobic001G237500 Sobic010G105600--Sobic001G105100 Sobic003G405700 Sobic003G405700 Sobic010G105600--Sobic003G405700 Sobic010G105600--Sobic001G067900 Sobic010G105600--Sobic003G400100 Sobic010G105600--Sobic006G257001 Sobic002G272600 Sobic002G272600 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic010G105600--Sobic006G034800 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic001G067900--Sobic003G217100 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic010G205300 Sobic010G205300 Sobic001G067900--Sobic010G205300 Sobic001G067900--Sobic001G237500 Sobic006G034800--Sobic006G257001 Sobic006G034800--Sobic001G105100 Sobic006G034800--Sobic001G067900 Sobic006G034800--Sobic003G400100 Sobic006G034800--Sobic001G041200 Sobic006G034800--Sobic010G205300 Sobic006G034800--Sobic010G105600 Sobic006G034800--Sobic001G206900 Sobic006G034800--Sobic002G131900 Sobic010G017000 Sobic010G017000 Sobic003G052400--Sobic010G017000 Sobic001G408100 Sobic001G408100 Sobic003G052400--Sobic001G408100 Sobic002G348600 Sobic002G348600 Sobic003G052400--Sobic002G348600 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G052400--Sobic003G217100 Sobic009G160200 Sobic009G160200 Sobic003G052400--Sobic009G160200 Sobic003G052400--Sobic006G257001 Sobic003G052400--Sobic001G237500 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic004G072800--Sobic003G007500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400
Octagon: transcription factors


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