Gene annotation
Transcriptome id Sobic.001G420800.1,Sobic.001G420800.3,Sobic.001G420800.2
Synonym Sb01g039600
Functional annotation DHHC zinc finger domain containing protein, expressed
UniProt A0A1B6QP46 , A0A1B6QP59
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF75
NCBI CDD KOG1315; Predicted DHHC-type Zn-finger protein
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G04970 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os03g16790.1,LOC_Os03g16790.2 : DHHC zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001845 , Zm00025a052755
Brachypodium PNT77666 , PNT77667 , KQK22339 , KQK22338
Barley HORVU4Hr1G059680.16 , HORVU4Hr1G059680.8 , HORVU4Hr1G059680.9 , HORVU4Hr1G059680.2 , HORVU4Hr1G059680.3 , HORVU4Hr1G059680.1 , HORVU4Hr1G059680.6 , HORVU4Hr1G059680.7 , HORVU4Hr1G059680.4 , HORVU4Hr1G059680.5 , HORVU4Hr1G059680.10 , HORVU4Hr1G059680.11 , HORVU4Hr1G059680.12 , HORVU4Hr1G059680.13 , HORVU4Hr1G059680.14 , HORVU4Hr1G059680.15
Wheat TraesCS4A02G097100 , TraesCS4A02G097100 , TraesCS4A02G097100 , TraesCS4A02G097100 , TraesCS4A02G097100 , TraesCS4A02G097100 , TraesCS4D02G208200 , TraesCS4D02G208200 , TraesCS4D02G208200 , TraesCS4D02G208200 , TraesCS4D02G208200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G226400 dynamin family protein, putative, expressed -
2 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
3 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
4 Sobic.002G299000 ribonuclease 2-5A family protein, expressed -
5 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
7 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
8 Sobic.001G261456 - -
9 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
10 Sobic.003G332500 EAP30/Vps36 family domain containing protein, expressed K12190: VPS36, ESCRT-II complex subunit VPS36
11 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
12 Sobic.006G131000 expressed protein K11968: ariadne-1
13 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
14 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
15 Sobic.003G187200 phox domain-containing protein, putative, expressed -
16 Sobic.007G093800 expressed protein -
17 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
18 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit


Gene co-expression network
sample Sobic001G420800 Sobic001G420800 Sobic009G226400 Sobic009G226400 Sobic001G420800--Sobic009G226400 Sobic003G337300 Sobic003G337300 Sobic001G420800--Sobic003G337300 Sobic001G096000 Sobic001G096000 Sobic001G420800--Sobic001G096000 Sobic002G299000 Sobic002G299000 Sobic001G420800--Sobic002G299000 SobicK004100 SobicK004100 Sobic001G420800--SobicK004100 Sobic008G124900 Sobic008G124900 Sobic001G420800--Sobic008G124900 Sobic001G449900 Sobic001G449900 Sobic001G420800--Sobic001G449900 Sobic001G261456 Sobic001G261456 Sobic001G420800--Sobic001G261456 Sobic004G092500 Sobic004G092500 Sobic001G420800--Sobic004G092500 Sobic001G023100 Sobic001G023100 Sobic009G226400--Sobic001G023100 Sobic003G270600 Sobic003G270600 Sobic009G226400--Sobic003G270600 Sobic009G226400--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic009G226400--Sobic001G369000 Sobic002G029300 Sobic002G029300 Sobic009G226400--Sobic002G029300 Sobic001G335900 Sobic001G335900 Sobic009G226400--Sobic001G335900 Sobic006G056200 Sobic006G056200 Sobic009G226400--Sobic006G056200 Sobic004G039600 Sobic004G039600 Sobic009G226400--Sobic004G039600 Sobic009G226400--Sobic001G420800 Sobic003G104000 Sobic003G104000 Sobic003G337300--Sobic003G104000 Sobic010G004100 Sobic010G004100 Sobic003G337300--Sobic010G004100 Sobic002G137400 Sobic002G137400 Sobic003G337300--Sobic002G137400 Sobic003G337300--Sobic004G039600 Sobic006G131000 Sobic006G131000 Sobic003G337300--Sobic006G131000 Sobic004G344901 Sobic004G344901 Sobic003G337300--Sobic004G344901 Sobic004G322400 Sobic004G322400 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic001G415300 Sobic001G415300 Sobic003G337300--Sobic001G415300 Sobic001G096000--Sobic006G131000 Sobic001G096000--Sobic008G124900 Sobic006G126100 Sobic006G126100 Sobic001G096000--Sobic006G126100 Sobic001G096000--Sobic003G332500 Sobic001G096000--Sobic003G104000 Sobic001G096000--Sobic003G337300 Sobic001G477700 Sobic001G477700 Sobic001G096000--Sobic001G477700 Sobic001G163400 Sobic001G163400 Sobic001G096000--Sobic001G163400 Sobic001G362200 Sobic001G362200 Sobic001G096000--Sobic001G362200 Sobic001G382600 Sobic001G382600 Sobic002G299000--Sobic001G382600 Sobic007G225100 Sobic007G225100 Sobic002G299000--Sobic007G225100 Sobic002G299000--Sobic003G337300 Sobic001G124200 Sobic001G124200 Sobic002G299000--Sobic001G124200 Sobic008G112800 Sobic008G112800 Sobic002G299000--Sobic008G112800 Sobic002G299000--Sobic004G039600 Sobic008G089100 Sobic008G089100 Sobic002G299000--Sobic008G089100 Sobic007G132100 Sobic007G132100 Sobic002G299000--Sobic007G132100 Sobic002G299000--Sobic006G131000 SobicK004100--Sobic001G369000 SobicK004100--Sobic004G039600 Sobic003G099300 Sobic003G099300 SobicK004100--Sobic003G099300 SobicK004100--Sobic001G335900 Sobic007G120500 Sobic007G120500 SobicK004100--Sobic007G120500 Sobic009G049400 Sobic009G049400 SobicK004100--Sobic009G049400 Sobic003G240700 Sobic003G240700 SobicK004100--Sobic003G240700 SobicK004100--Sobic009G226400 SobicK004100--Sobic001G449900 Sobic007G093800 Sobic007G093800 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic006G033200 Sobic006G033200 Sobic008G124900--Sobic006G033200 Sobic008G124900--Sobic001G096000 Sobic010G278200 Sobic010G278200 Sobic008G124900--Sobic010G278200 Sobic008G124900--Sobic006G131000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic009G068500 Sobic009G068500 Sobic008G124900--Sobic009G068500 Sobic010G223300 Sobic010G223300 Sobic001G449900--Sobic010G223300 Sobic002G020700 Sobic002G020700 Sobic001G449900--Sobic002G020700 Sobic008G085700 Sobic008G085700 Sobic001G449900--Sobic008G085700 Sobic001G301200 Sobic001G301200 Sobic001G449900--Sobic001G301200 Sobic003G189600 Sobic003G189600 Sobic001G449900--Sobic003G189600 Sobic001G428800 Sobic001G428800 Sobic001G449900--Sobic001G428800 Sobic003G029600 Sobic003G029600 Sobic001G449900--Sobic003G029600 Sobic010G020400 Sobic010G020400 Sobic001G449900--Sobic010G020400 Sobic007G005500 Sobic007G005500 Sobic001G449900--Sobic007G005500 Sobic001G261456--Sobic004G039600 Sobic001G094900 Sobic001G094900 Sobic001G261456--Sobic001G094900 Sobic008G092300 Sobic008G092300 Sobic001G261456--Sobic008G092300 Sobic001G261456--Sobic001G124200 Sobic009G219000 Sobic009G219000 Sobic001G261456--Sobic009G219000 Sobic001G371200 Sobic001G371200 Sobic001G261456--Sobic001G371200 Sobic003G400100 Sobic003G400100 Sobic001G261456--Sobic003G400100 Sobic001G281600 Sobic001G281600 Sobic001G261456--Sobic001G281600 Sobic001G143500 Sobic001G143500 Sobic001G261456--Sobic001G143500 Sobic004G092500--Sobic007G132100 Sobic001G493200 Sobic001G493200 Sobic004G092500--Sobic001G493200 Sobic004G092500--Sobic010G223300 Sobic003G143200 Sobic003G143200 Sobic004G092500--Sobic003G143200 Sobic004G092500--Sobic010G020400 Sobic004G257100 Sobic004G257100 Sobic004G092500--Sobic004G257100 Sobic004G092500--Sobic004G039600 Sobic006G077200 Sobic006G077200 Sobic004G092500--Sobic006G077200 Sobic007G167900 Sobic007G167900 Sobic004G092500--Sobic007G167900
Octagon: transcription factors


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