Gene annotation
Transcriptome id Sobic.001G015800.1
Synonym Sb01g001550
Functional annotation serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed
UniProt C5WSZ6
Pfam PF01603
Panther DB PTHR10257 PTHR10257:SF18
NCBI CDD -
KEGG Orthology K11584; serine/threonine-protein phosphatase 2A regulatory subunit B'
Gene Ontology GO:0007165; signal transduction GO:0000159protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT4G15415 : Protein phosphatase 2A regulatory B subunit family protein
RAP-DB (Rice) LOC_Os03g62730.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a008990
Brachypodium KQK12158
Barley HORVU5Hr1G120550.9 , HORVU5Hr1G120550.4 , HORVU5Hr1G120550.5 , HORVU5Hr1G120550.6 , HORVU5Hr1G120550.7 , HORVU5Hr1G120550.1 , HORVU5Hr1G120550.2 , HORVU5Hr1G120550.3 , HORVU5Hr1G120550.8 , HORVU5Hr1G120550.10
Wheat TraesCS5B02G533000 , TraesCS4A02G341600 , TraesCS5D02G531300
Populus -


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cDNA sequences
Sobic.001G015800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G163400 roothairless 1, putative, expressed -
2 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
3 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
4 Sobic.003G331400 expressed protein -
5 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
6 Sobic.004G286500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
7 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
8 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
9 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
10 Sobic.004G323700 zinc finger family protein, putative, expressed -
11 Sobic.009G101300 phox domain-containing protein, putative, expressed -
12 Sobic.004G344901 - K10357: myosin V
13 Sobic.004G311900 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
14 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
15 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
16 Sobic.001G420800 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
17 Sobic.002G348600 zinc finger family protein, putative, expressed -
18 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
19 Sobic.001G127200 zinc finger family protein, putative, expressed -
20 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic001G015800 Sobic001G015800 Sobic001G163400 Sobic001G163400 Sobic001G015800--Sobic001G163400 Sobic008G124900 Sobic008G124900 Sobic001G015800--Sobic008G124900 Sobic003G104000 Sobic003G104000 Sobic001G015800--Sobic003G104000 Sobic003G331400 Sobic003G331400 Sobic001G015800--Sobic003G331400 Sobic006G033200 Sobic006G033200 Sobic001G015800--Sobic006G033200 Sobic004G286500 Sobic004G286500 Sobic001G015800--Sobic004G286500 Sobic002G134600 Sobic002G134600 Sobic001G015800--Sobic002G134600 Sobic001G096000 Sobic001G096000 Sobic001G015800--Sobic001G096000 Sobic003G337300 Sobic003G337300 Sobic001G015800--Sobic003G337300 Sobic004G344901 Sobic004G344901 Sobic001G163400--Sobic004G344901 Sobic001G163400--Sobic003G337300 Sobic001G163400--Sobic001G015800 Sobic006G131000 Sobic006G131000 Sobic001G163400--Sobic006G131000 Sobic004G039600 Sobic004G039600 Sobic001G163400--Sobic004G039600 Sobic001G163400--Sobic001G096000 Sobic001G415300 Sobic001G415300 Sobic001G163400--Sobic001G415300 Sobic001G124200 Sobic001G124200 Sobic001G163400--Sobic001G124200 Sobic006G163800 Sobic006G163800 Sobic001G163400--Sobic006G163800 Sobic007G093800 Sobic007G093800 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic008G124900--Sobic006G033200 Sobic008G124900--Sobic001G096000 Sobic010G278200 Sobic010G278200 Sobic008G124900--Sobic010G278200 Sobic008G124900--Sobic006G131000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic009G068500 Sobic009G068500 Sobic008G124900--Sobic009G068500 Sobic003G104000--Sobic003G337300 Sobic002G256700 Sobic002G256700 Sobic003G104000--Sobic002G256700 Sobic006G126100 Sobic006G126100 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic004G131300 Sobic004G131300 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic003G331400--Sobic004G344901 Sobic002G137400 Sobic002G137400 Sobic003G331400--Sobic002G137400 Sobic003G331400--Sobic001G415300 Sobic004G358400 Sobic004G358400 Sobic003G331400--Sobic004G358400 Sobic004G004300 Sobic004G004300 Sobic003G331400--Sobic004G004300 Sobic002G031100 Sobic002G031100 Sobic003G331400--Sobic002G031100 Sobic005G026200 Sobic005G026200 Sobic003G331400--Sobic005G026200 Sobic010G004100 Sobic010G004100 Sobic003G331400--Sobic010G004100 Sobic003G331400--Sobic001G163400 Sobic010G130000 Sobic010G130000 Sobic006G033200--Sobic010G130000 Sobic006G033200--Sobic008G124900 Sobic006G033200--Sobic010G278200 Sobic009G138100 Sobic009G138100 Sobic006G033200--Sobic009G138100 Sobic006G033200--Sobic007G093800 Sobic004G202500 Sobic004G202500 Sobic006G033200--Sobic004G202500 Sobic007G179800 Sobic007G179800 Sobic006G033200--Sobic007G179800 Sobic003G302900 Sobic003G302900 Sobic006G033200--Sobic003G302900 Sobic003G312200 Sobic003G312200 Sobic006G033200--Sobic003G312200 Sobic001G515000 Sobic001G515000 Sobic004G286500--Sobic001G515000 Sobic008G046500 Sobic008G046500 Sobic004G286500--Sobic008G046500 Sobic004G286500--Sobic006G163800 Sobic003G187200 Sobic003G187200 Sobic004G286500--Sobic003G187200 Sobic010G053800 Sobic010G053800 Sobic004G286500--Sobic010G053800 Sobic001G143500 Sobic001G143500 Sobic004G286500--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic004G286500--Sobic007G027700 Sobic006G012500 Sobic006G012500 Sobic004G286500--Sobic006G012500 Sobic001G094900 Sobic001G094900 Sobic004G286500--Sobic001G094900 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic001G096000--Sobic006G131000 Sobic001G096000--Sobic008G124900 Sobic001G096000--Sobic006G126100 Sobic003G332500 Sobic003G332500 Sobic001G096000--Sobic003G332500 Sobic001G096000--Sobic003G104000 Sobic001G096000--Sobic003G337300 Sobic001G477700 Sobic001G477700 Sobic001G096000--Sobic001G477700 Sobic001G096000--Sobic001G163400 Sobic001G096000--Sobic001G362200 Sobic003G337300--Sobic003G104000 Sobic003G337300--Sobic010G004100 Sobic003G337300--Sobic002G137400 Sobic003G337300--Sobic004G039600 Sobic003G337300--Sobic006G131000 Sobic003G337300--Sobic004G344901 Sobic004G322400 Sobic004G322400 Sobic003G337300--Sobic004G322400 Sobic003G337300--Sobic003G332500 Sobic003G337300--Sobic001G415300
Octagon: transcription factors


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