Gene annotation
Transcriptome id Sobic.004G344901.1,Sobic.004G344901.2
Synonym -
Functional annotation -
UniProt A0A1Z5RQC4 , A0A1Z5RQT1
Pfam PF02736 PF00612 PF01843 PF00063
Panther DB PTHR13140 PTHR13140:SF382
NCBI CDD -
KEGG Orthology K10357; myosin V
Gene Ontology GO:0016459; myosin complex GO:0005524ATP binding GO:0003774motor activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G04160 : myosin XI B
RAP-DB (Rice) LOC_Os02g57190.1 : Myosin head domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009139 , Zm00025a016813 , Zm00025a022604
Brachypodium KQK01352
Barley HORVU5Hr1G125430.5 , HORVU5Hr1G125430.6 , HORVU5Hr1G125430.7 , HORVU5Hr1G125430.16 , HORVU5Hr1G125430.17 , HORVU5Hr1G125430.15 , HORVU5Hr1G125430.18 , HORVU5Hr1G125430.19 , HORVU1Hr1G044020.11 , HORVU1Hr1G044020.10 , HORVU1Hr1G044020.13 , HORVU1Hr1G044020.12 , HORVU1Hr1G044020.15 , HORVU1Hr1G044020.14 , HORVU1Hr1G044020.17 , HORVU1Hr1G044020.16 , HORVU1Hr1G044020.18 , HORVU6Hr1G091010.38 , HORVU5Hr1G125430.58 , HORVU6Hr1G091010.33 , HORVU5Hr1G125430.57 , HORVU5Hr1G125430.54 , HORVU5Hr1G125430.55 , HORVU5Hr1G125430.52 , HORVU5Hr1G125430.53 , HORVU5Hr1G125430.50 , HORVU5Hr1G125430.51 , HORVU5Hr1G125430.29 , HORVU5Hr1G125430.28 , HORVU5Hr1G125430.23 , HORVU5Hr1G125430.22 , HORVU5Hr1G125430.21 , HORVU5Hr1G125430.20 , HORVU5Hr1G125430.27 , HORVU5Hr1G125430.26 , HORVU5Hr1G125430.25 , HORVU5Hr1G125430.24 , HORVU6Hr1G091010.34 , HORVU6Hr1G091010.28 , HORVU6Hr1G091010.29 , HORVU6Hr1G091010.20 , HORVU6Hr1G091010.21 , HORVU6Hr1G091010.22 , HORVU6Hr1G091010.23 , HORVU6Hr1G091010.24 , HORVU6Hr1G091010.25 , HORVU6Hr1G091010.26 , HORVU6Hr1G091010.27 , HORVU5Hr1G125430.38 , HORVU5Hr1G125430.39 , HORVU5Hr1G125430.30 , HORVU5Hr1G125430.31 , HORVU5Hr1G125430.32 , HORVU5Hr1G125430.33 , HORVU5Hr1G125430.34 , HORVU5Hr1G125430.35 , HORVU5Hr1G125430.36 , HORVU5Hr1G125430.37 , HORVU5Hr1G125430.56 , HORVU6Hr1G091010.32 , HORVU6Hr1G091010.31 , HORVU6Hr1G091010.30 , HORVU6Hr1G091010.37 , HORVU6Hr1G091010.36 , HORVU6Hr1G091010.35 , HORVU6Hr1G091010.9 , HORVU6Hr1G091010.8 , HORVU6Hr1G091010.1 , HORVU6Hr1G091010.3 , HORVU6Hr1G091010.2 , HORVU6Hr1G091010.5 , HORVU6Hr1G091010.4 , HORVU6Hr1G091010.7 , HORVU6Hr1G091010.6 , HORVU6Hr1G091010.19 , HORVU6Hr1G091010.18 , HORVU6Hr1G091010.15 , HORVU6Hr1G091010.14 , HORVU6Hr1G091010.17 , HORVU6Hr1G091010.16 , HORVU6Hr1G091010.11 , HORVU6Hr1G091010.13 , HORVU6Hr1G091010.12 , HORVU1Hr1G044020.24 , HORVU1Hr1G044020.20 , HORVU1Hr1G044020.21 , HORVU1Hr1G044020.22 , HORVU1Hr1G044020.23 , HORVU6Hr1G091010.10 , HORVU5Hr1G125430.49 , HORVU5Hr1G125430.48 , HORVU5Hr1G125430.41 , HORVU5Hr1G125430.40 , HORVU5Hr1G125430.43 , HORVU5Hr1G125430.42 , HORVU5Hr1G125430.45 , HORVU5Hr1G125430.44 , HORVU5Hr1G125430.47 , HORVU5Hr1G125430.46 , HORVU1Hr1G044020.5 , HORVU1Hr1G044020.4 , HORVU1Hr1G044020.7 , HORVU1Hr1G044020.6 , HORVU1Hr1G044020.1 , HORVU1Hr1G044020.3 , HORVU1Hr1G044020.2 , HORVU1Hr1G044020.9 , HORVU1Hr1G044020.8
Wheat TraesCS6B02G431400 , TraesCS6D02G377100 , TraesCS5D02G558600 , TraesCS6A02G390800 , TraesCS6A02G390800
Populus PNS89893 , PNT51660 , PNT51661 , PNT51662 , PNT19187 , PNT51658 , PNT51659 , PNT19188 , PNT06661


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G331400 expressed protein -
2 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
3 Sobic.001G163400 roothairless 1, putative, expressed -
4 Sobic.006G131000 expressed protein K11968: ariadne-1
5 Sobic.004G004300 expressed protein -
6 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
7 Sobic.008G003700 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
8 Sobic.001G281100 START domain containing protein, expressed -
9 Sobic.002G137400 protein binding protein, putative, expressed -
10 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
11 Sobic.001G426600 SH3 domain containing protein, expressed -
12 Sobic.010G275500 EF hand family protein, putative, expressed -
13 Sobic.002G327000 villin protein, putative, expressed -
14 Sobic.004G358400 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
15 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
16 Sobic.008G099800 expressed protein -
17 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
18 Sobic.004G322400 WD40-like, putative, expressed -
19 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
20 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17


Gene co-expression network
sample Sobic004G344901 Sobic004G344901 Sobic003G331400 Sobic003G331400 Sobic004G344901--Sobic003G331400 Sobic003G337300 Sobic003G337300 Sobic004G344901--Sobic003G337300 Sobic001G163400 Sobic001G163400 Sobic004G344901--Sobic001G163400 Sobic006G131000 Sobic006G131000 Sobic004G344901--Sobic006G131000 Sobic004G004300 Sobic004G004300 Sobic004G344901--Sobic004G004300 Sobic001G415300 Sobic001G415300 Sobic004G344901--Sobic001G415300 Sobic008G003700 Sobic008G003700 Sobic004G344901--Sobic008G003700 Sobic001G281100 Sobic001G281100 Sobic004G344901--Sobic001G281100 Sobic002G137400 Sobic002G137400 Sobic004G344901--Sobic002G137400 Sobic003G331400--Sobic004G344901 Sobic003G331400--Sobic002G137400 Sobic003G331400--Sobic001G415300 Sobic004G358400 Sobic004G358400 Sobic003G331400--Sobic004G358400 Sobic003G331400--Sobic004G004300 Sobic002G031100 Sobic002G031100 Sobic003G331400--Sobic002G031100 Sobic005G026200 Sobic005G026200 Sobic003G331400--Sobic005G026200 Sobic010G004100 Sobic010G004100 Sobic003G331400--Sobic010G004100 Sobic003G331400--Sobic001G163400 Sobic003G104000 Sobic003G104000 Sobic003G337300--Sobic003G104000 Sobic003G337300--Sobic010G004100 Sobic003G337300--Sobic002G137400 Sobic004G039600 Sobic004G039600 Sobic003G337300--Sobic004G039600 Sobic003G337300--Sobic006G131000 Sobic003G337300--Sobic004G344901 Sobic004G322400 Sobic004G322400 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic003G337300--Sobic001G415300 Sobic001G163400--Sobic004G344901 Sobic001G163400--Sobic003G337300 Sobic001G015800 Sobic001G015800 Sobic001G163400--Sobic001G015800 Sobic001G163400--Sobic006G131000 Sobic001G163400--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic001G163400--Sobic001G096000 Sobic001G163400--Sobic001G415300 Sobic001G124200 Sobic001G124200 Sobic001G163400--Sobic001G124200 Sobic006G163800 Sobic006G163800 Sobic001G163400--Sobic006G163800 Sobic007G218000 Sobic007G218000 Sobic006G131000--Sobic007G218000 Sobic007G132100 Sobic007G132100 Sobic006G131000--Sobic007G132100 Sobic006G131000--Sobic006G163800 Sobic006G131000--Sobic004G039600 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic010G275500 Sobic010G275500 Sobic006G131000--Sobic010G275500 Sobic001G369000 Sobic001G369000 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic004G004300--Sobic001G281100 Sobic004G004300--Sobic005G026200 Sobic001G534800 Sobic001G534800 Sobic004G004300--Sobic001G534800 Sobic006G126100 Sobic006G126100 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic004G004300--Sobic001G415300 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic001G415300--Sobic002G137400 Sobic001G415300--Sobic004G004300 Sobic001G415300--Sobic001G281100 Sobic001G085300 Sobic001G085300 Sobic001G415300--Sobic001G085300 Sobic001G415300--Sobic003G337300 Sobic001G415300--Sobic006G126100 Sobic001G415300--Sobic001G534800 Sobic004G002100 Sobic004G002100 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900 Sobic008G003700--Sobic005G003300 Sobic008G003700--Sobic004G344901 Sobic007G075500 Sobic007G075500 Sobic008G003700--Sobic007G075500 Sobic001G404600 Sobic001G404600 Sobic008G003700--Sobic001G404600 Sobic008G124800 Sobic008G124800 Sobic008G003700--Sobic008G124800 Sobic003G029600 Sobic003G029600 Sobic008G003700--Sobic003G029600 Sobic008G003700--Sobic003G337300 Sobic004G261600 Sobic004G261600 Sobic008G003700--Sobic004G261600 Sobic007G054800 Sobic007G054800 Sobic008G003700--Sobic007G054800 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic006G012500 Sobic006G012500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500 Sobic002G137400--Sobic001G415300 Sobic002G137400--Sobic004G002100 Sobic002G137400--Sobic010G004100 Sobic002G137400--Sobic003G337300 Sobic002G137400--Sobic003G331400 Sobic002G137400--Sobic001G281100 Sobic002G137400--Sobic004G004300 Sobic002G137400--Sobic001G534800 Sobic002G137400--Sobic002G031100
Octagon: transcription factors


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