Gene annotation
Transcriptome id Sobic.004G311900.2
Synonym MAPKKK8, ATMEKK1, Sb04g034410, MEKK1, ARAKIN
Functional annotation STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1Z5RPV9
Pfam PF00069
Panther DB PTHR24361 PTHR24361:SF409
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology K13414; mitogen-activated protein kinase kinase kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G08500 : MAPK/ERK kinase kinase 1
RAP-DB (Rice) LOC_Os03g15570.1 : STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a033077
Brachypodium KQK01712
Barley HORVU6Hr1G079810.13 , HORVU6Hr1G079810.12 , HORVU6Hr1G079810.11 , HORVU6Hr1G079810.10 , HORVU6Hr1G079810.7 , HORVU6Hr1G079810.6 , HORVU6Hr1G079810.5 , HORVU6Hr1G079810.4 , HORVU6Hr1G079810.3 , HORVU6Hr1G079810.2 , HORVU6Hr1G079810.1 , HORVU6Hr1G079810.9 , HORVU6Hr1G079810.8
Wheat TraesCS6D02G307100 , TraesCS6B02G358800 , TraesCS6A02G327500 , TraesCS6D02G306400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
2 Sobic.002G119400 protein kinase, putative, expressed K13436: pto-interacting protein 1
3 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
4 Sobic.004G176400 ATP binding protein, putative, expressed K06883: uncharacterized protein
5 Sobic.004G323700 zinc finger family protein, putative, expressed -
6 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
7 Sobic.010G029900 leucine carboxyl methyltransferase 1, putative, expressed K15451: PPM2, LCMT2, tRNA wybutosine-synthesizing protein 4
8 Sobic.004G286500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.006G250300 pelota, putative, expressed K06965: PELO, DOM34, protein pelota
10 Sobic.005G158300 RWD domain containing protein, expressed K10640: RNF25, E3 ubiquitin-protein ligase RNF25
11 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
12 Sobic.002G371300 peroxisome assembly protein, putative, expressed K13346: peroxin-10
13 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
14 Sobic.009G101300 phox domain-containing protein, putative, expressed -
15 Sobic.005G015450 - -
16 Sobic.003G332500 EAP30/Vps36 family domain containing protein, expressed K12190: VPS36, ESCRT-II complex subunit VPS36
17 Sobic.009G050700 importin subunit alpha, putative, expressed -
18 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
19 Sobic.001G515000 protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed K00587: ICMT, protein-S-isoprenylcysteine O-methyltransferase
20 Sobic.009G131900 - K18177: cytochrome c oxidase assembly factor 4


Gene co-expression network
sample Sobic004G311900 Sobic004G311900 Sobic001G015800 Sobic001G015800 Sobic004G311900--Sobic001G015800 Sobic002G119400 Sobic002G119400 Sobic004G311900--Sobic002G119400 Sobic008G124900 Sobic008G124900 Sobic004G311900--Sobic008G124900 Sobic004G176400 Sobic004G176400 Sobic004G311900--Sobic004G176400 Sobic004G323700 Sobic004G323700 Sobic004G311900--Sobic004G323700 Sobic004G353000 Sobic004G353000 Sobic004G311900--Sobic004G353000 Sobic010G029900 Sobic010G029900 Sobic004G311900--Sobic010G029900 Sobic004G286500 Sobic004G286500 Sobic004G311900--Sobic004G286500 Sobic006G250300 Sobic006G250300 Sobic004G311900--Sobic006G250300 Sobic001G163400 Sobic001G163400 Sobic001G015800--Sobic001G163400 Sobic001G015800--Sobic008G124900 Sobic003G104000 Sobic003G104000 Sobic001G015800--Sobic003G104000 Sobic003G331400 Sobic003G331400 Sobic001G015800--Sobic003G331400 Sobic006G033200 Sobic006G033200 Sobic001G015800--Sobic006G033200 Sobic001G015800--Sobic004G286500 Sobic002G134600 Sobic002G134600 Sobic001G015800--Sobic002G134600 Sobic001G096000 Sobic001G096000 Sobic001G015800--Sobic001G096000 Sobic003G337300 Sobic003G337300 Sobic001G015800--Sobic003G337300 Sobic002G119400--Sobic004G311900 Sobic010G186600 Sobic010G186600 Sobic002G119400--Sobic010G186600 Sobic001G168900 Sobic001G168900 Sobic002G119400--Sobic001G168900 Sobic002G119400--Sobic004G353000 Sobic009G050700 Sobic009G050700 Sobic002G119400--Sobic009G050700 Sobic002G119400--Sobic004G176400 Sobic006G186800 Sobic006G186800 Sobic002G119400--Sobic006G186800 Sobic002G119400--Sobic006G250300 Sobic009G258400 Sobic009G258400 Sobic002G119400--Sobic009G258400 Sobic007G093800 Sobic007G093800 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic008G124900--Sobic006G033200 Sobic008G124900--Sobic001G096000 Sobic010G278200 Sobic010G278200 Sobic008G124900--Sobic010G278200 Sobic006G131000 Sobic006G131000 Sobic008G124900--Sobic006G131000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic009G068500 Sobic009G068500 Sobic008G124900--Sobic009G068500 Sobic009G164000 Sobic009G164000 Sobic004G176400--Sobic009G164000 Sobic006G101700 Sobic006G101700 Sobic004G176400--Sobic006G101700 Sobic004G156800 Sobic004G156800 Sobic004G176400--Sobic004G156800 Sobic004G176400--Sobic004G353000 Sobic008G092300 Sobic008G092300 Sobic004G176400--Sobic008G092300 Sobic007G184500 Sobic007G184500 Sobic004G176400--Sobic007G184500 Sobic009G143800 Sobic009G143800 Sobic004G176400--Sobic009G143800 Sobic001G360200 Sobic001G360200 Sobic004G176400--Sobic001G360200 Sobic006G278700 Sobic006G278700 Sobic004G176400--Sobic006G278700 Sobic002G117400 Sobic002G117400 Sobic004G323700--Sobic002G117400 Sobic007G218000 Sobic007G218000 Sobic004G323700--Sobic007G218000 Sobic002G303600 Sobic002G303600 Sobic004G323700--Sobic002G303600 Sobic010G261600 Sobic010G261600 Sobic004G323700--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic004G323700--Sobic004G228800 Sobic004G323700--Sobic010G278200 Sobic006G174850 Sobic006G174850 Sobic004G323700--Sobic006G174850 Sobic004G323700--Sobic006G131000 Sobic004G039600 Sobic004G039600 Sobic004G323700--Sobic004G039600 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic001G473600 Sobic001G473600 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic003G121300 Sobic003G121300 Sobic010G029900--Sobic003G121300 Sobic007G191700 Sobic007G191700 Sobic010G029900--Sobic007G191700 Sobic010G237900 Sobic010G237900 Sobic010G029900--Sobic010G237900 Sobic007G041300 Sobic007G041300 Sobic010G029900--Sobic007G041300 Sobic010G095700 Sobic010G095700 Sobic010G029900--Sobic010G095700 Sobic005G015450 Sobic005G015450 Sobic010G029900--Sobic005G015450 Sobic006G121300 Sobic006G121300 Sobic010G029900--Sobic006G121300 Sobic007G075900 Sobic007G075900 Sobic010G029900--Sobic007G075900 Sobic007G102700 Sobic007G102700 Sobic010G029900--Sobic007G102700 Sobic001G515000 Sobic001G515000 Sobic004G286500--Sobic001G515000 Sobic008G046500 Sobic008G046500 Sobic004G286500--Sobic008G046500 Sobic006G163800 Sobic006G163800 Sobic004G286500--Sobic006G163800 Sobic003G187200 Sobic003G187200 Sobic004G286500--Sobic003G187200 Sobic010G053800 Sobic010G053800 Sobic004G286500--Sobic010G053800 Sobic001G143500 Sobic001G143500 Sobic004G286500--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic004G286500--Sobic007G027700 Sobic006G012500 Sobic006G012500 Sobic004G286500--Sobic006G012500 Sobic001G094900 Sobic001G094900 Sobic004G286500--Sobic001G094900 Sobic001G178300 Sobic001G178300 Sobic006G250300--Sobic001G178300 Sobic001G456300 Sobic001G456300 Sobic006G250300--Sobic001G456300 Sobic006G056700 Sobic006G056700 Sobic006G250300--Sobic006G056700 Sobic001G542450 Sobic001G542450 Sobic006G250300--Sobic001G542450 Sobic006G250300--Sobic002G371300 Sobic006G250300--Sobic009G164000 Sobic003G046300 Sobic003G046300 Sobic006G250300--Sobic003G046300 Sobic001G430400 Sobic001G430400 Sobic006G250300--Sobic001G430400 Sobic006G250300--Sobic004G353000
Octagon: transcription factors


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