Gene annotation
Transcriptome id Sobic.004G176400.1
Synonym QQT1, Sb04g022660, EMB1705
Functional annotation ATP binding protein, putative, expressed
UniProt C5XUS2
Pfam PF13207
Panther DB PTHR21231 PTHR21231:SF3
NCBI CDD KOG1533; Predicted GTPase
KEGG Orthology K06883; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22370 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g34950.1 : ATP binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a020655
Brachypodium KQJ99875
Barley HORVU3Hr1G061900.10 , HORVU3Hr1G061900.9 , HORVU3Hr1G061900.8 , HORVU3Hr1G061900.5 , HORVU3Hr1G061900.4 , HORVU3Hr1G061900.7 , HORVU3Hr1G061900.6 , HORVU3Hr1G061900.1 , HORVU3Hr1G061900.3 , HORVU3Hr1G061900.2
Wheat TraesCS3B02G304800 , TraesCS3B02G304800 , TraesCS3D02G270700 , TraesCS3A02G271000
Populus -


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cDNA sequences
Sobic.004G176400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G164000 tentative name(PubMedID : 31536532)@cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
2 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
3 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -
4 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
5 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.007G184500 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
7 Sobic.009G143800 - K14806: DDX31, ATP-dependent RNA helicase DDX31/DBP7
8 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
9 Sobic.006G278700 expressed protein -
10 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
11 Sobic.010G249100 ZOS8-11 - C2H2 zinc finger protein, expressed -
12 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
13 Sobic.001G193300 TBC domain containing protein, expressed -
14 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
15 Sobic.010G223900 OTU-like cysteine protease family protein, putative, expressed -
16 Sobic.004G202500 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
17 Sobic.003G186700 ubiquitin carboxyl-terminal hydrolase 6, putative, expressed K11843: USP14, ubiquitin carboxyl-terminal hydrolase 14
18 Sobic.010G269100 zinc finger family protein, putative, expressed -
19 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
20 Sobic.010G209000 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4


Gene co-expression network
sample Sobic004G176400 Sobic004G176400 Sobic009G164000 Sobic009G164000 Sobic004G176400--Sobic009G164000 Sobic006G101700 Sobic006G101700 Sobic004G176400--Sobic006G101700 Sobic004G156800 Sobic004G156800 Sobic004G176400--Sobic004G156800 Sobic004G353000 Sobic004G353000 Sobic004G176400--Sobic004G353000 Sobic008G092300 Sobic008G092300 Sobic004G176400--Sobic008G092300 Sobic007G184500 Sobic007G184500 Sobic004G176400--Sobic007G184500 Sobic009G143800 Sobic009G143800 Sobic004G176400--Sobic009G143800 Sobic001G360200 Sobic001G360200 Sobic004G176400--Sobic001G360200 Sobic006G278700 Sobic006G278700 Sobic004G176400--Sobic006G278700 Sobic009G164000--Sobic004G176400 Sobic003G422900 Sobic003G422900 Sobic009G164000--Sobic003G422900 Sobic002G371700 Sobic002G371700 Sobic009G164000--Sobic002G371700 Sobic001G114500 Sobic001G114500 Sobic009G164000--Sobic001G114500 Sobic003G132000 Sobic003G132000 Sobic009G164000--Sobic003G132000 Sobic008G103300 Sobic008G103300 Sobic009G164000--Sobic008G103300 Sobic009G164000--Sobic004G353000 Sobic002G300700 Sobic002G300700 Sobic009G164000--Sobic002G300700 Sobic001G249700 Sobic001G249700 Sobic009G164000--Sobic001G249700 Sobic004G066200 Sobic004G066200 Sobic006G101700--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic006G101700--Sobic007G166400 Sobic001G085100 Sobic001G085100 Sobic006G101700--Sobic001G085100 Sobic001G080700 Sobic001G080700 Sobic006G101700--Sobic001G080700 Sobic009G222500 Sobic009G222500 Sobic006G101700--Sobic009G222500 Sobic009G165800 Sobic009G165800 Sobic006G101700--Sobic009G165800 Sobic002G192200 Sobic002G192200 Sobic006G101700--Sobic002G192200 Sobic006G049700 Sobic006G049700 Sobic006G101700--Sobic006G049700 Sobic001G512300 Sobic001G512300 Sobic006G101700--Sobic001G512300 Sobic007G102700 Sobic007G102700 Sobic004G156800--Sobic007G102700 Sobic010G237900 Sobic010G237900 Sobic004G156800--Sobic010G237900 Sobic001G259000 Sobic001G259000 Sobic004G156800--Sobic001G259000 Sobic001G527300 Sobic001G527300 Sobic004G156800--Sobic001G527300 Sobic004G129300 Sobic004G129300 Sobic004G156800--Sobic004G129300 Sobic004G156800--Sobic001G114500 Sobic004G156800--Sobic009G164000 Sobic010G007100 Sobic010G007100 Sobic004G156800--Sobic010G007100 Sobic006G204800 Sobic006G204800 Sobic004G156800--Sobic006G204800 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic001G473600 Sobic001G473600 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic010G279700 Sobic010G279700 Sobic008G092300--Sobic010G279700 Sobic001G094900 Sobic001G094900 Sobic008G092300--Sobic001G094900 Sobic007G225100 Sobic007G225100 Sobic008G092300--Sobic007G225100 Sobic001G261456 Sobic001G261456 Sobic008G092300--Sobic001G261456 Sobic010G269100 Sobic010G269100 Sobic008G092300--Sobic010G269100 Sobic003G126600 Sobic003G126600 Sobic008G092300--Sobic003G126600 Sobic008G112800 Sobic008G112800 Sobic008G092300--Sobic008G112800 Sobic001G102700 Sobic001G102700 Sobic008G092300--Sobic001G102700 Sobic004G039600 Sobic004G039600 Sobic008G092300--Sobic004G039600 Sobic007G184500--Sobic001G360200 Sobic001G033500 Sobic001G033500 Sobic007G184500--Sobic001G033500 Sobic007G077400 Sobic007G077400 Sobic007G184500--Sobic007G077400 Sobic006G044600 Sobic006G044600 Sobic007G184500--Sobic006G044600 Sobic009G058500 Sobic009G058500 Sobic007G184500--Sobic009G058500 Sobic007G184500--Sobic006G278700 Sobic007G184500--Sobic004G353000 Sobic004G178200 Sobic004G178200 Sobic007G184500--Sobic004G178200 Sobic010G073100 Sobic010G073100 Sobic007G184500--Sobic010G073100 Sobic009G143800--Sobic004G353000 Sobic009G143800--Sobic001G259000 Sobic004G332400 Sobic004G332400 Sobic009G143800--Sobic004G332400 Sobic008G014500 Sobic008G014500 Sobic009G143800--Sobic008G014500 Sobic010G118000 Sobic010G118000 Sobic009G143800--Sobic010G118000 Sobic009G143800--Sobic006G200700 Sobic008G147200 Sobic008G147200 Sobic009G143800--Sobic008G147200 Sobic008G131000 Sobic008G131000 Sobic009G143800--Sobic008G131000 Sobic009G143800--Sobic001G291800 Sobic001G360200--Sobic006G278700 Sobic001G360200--Sobic004G066200 Sobic001G360200--Sobic007G184500 Sobic006G252700 Sobic006G252700 Sobic001G360200--Sobic006G252700 Sobic001G360200--Sobic002G300700 Sobic001G143500 Sobic001G143500 Sobic001G360200--Sobic001G143500 Sobic001G360200--Sobic009G058500 Sobic009G228700 Sobic009G228700 Sobic001G360200--Sobic009G228700 Sobic001G360200--Sobic006G101700 Sobic002G378200 Sobic002G378200 Sobic006G278700--Sobic002G378200 Sobic006G278700--Sobic006G252700 Sobic007G205000 Sobic007G205000 Sobic006G278700--Sobic007G205000 Sobic006G278700--Sobic001G360200 Sobic003G401100 Sobic003G401100 Sobic006G278700--Sobic003G401100 Sobic006G278700--Sobic001G143500 Sobic001G226000 Sobic001G226000 Sobic006G278700--Sobic001G226000 Sobic007G118200 Sobic007G118200 Sobic006G278700--Sobic007G118200 Sobic008G004400 Sobic008G004400 Sobic006G278700--Sobic008G004400
Octagon: transcription factors


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