Gene annotation
Transcriptome id Sobic.010G269100.3,Sobic.010G269100.2
Synonym Sb10g030410
Functional annotation zinc finger family protein, putative, expressed
UniProt A0A1W0VV03
Pfam PF01363
Panther DB PTHR22835 PTHR22835:SF196
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20110 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os06g50840.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018507
Brachypodium KQK11211 , KQK16678 , PNT75310
Barley HORVU2Hr1G037770.1 , HORVU2Hr1G037770.2 , HORVU2Hr1G037770.3 , HORVU2Hr1G037770.4
Wheat TraesCS7D02G528300 , TraesCS2B02G223000
Populus -


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cDNA sequences
Sobic.010G269100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
2 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
3 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
5 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
6 Sobic.002G268400 expressed protein -
7 Sobic.006G278700 expressed protein -
8 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
9 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
10 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
11 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
13 Sobic.009G231700 GTP binding protein, putative, expressed -
14 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
15 Sobic.009G226400 dynamin family protein, putative, expressed -
16 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
17 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
18 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
19 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
20 Sobic.010G057900 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5


Gene co-expression network
sample Sobic010G269100 Sobic010G269100 Sobic003G099300 Sobic003G099300 Sobic010G269100--Sobic003G099300 Sobic002G256200 Sobic002G256200 Sobic010G269100--Sobic002G256200 Sobic008G092300 Sobic008G092300 Sobic010G269100--Sobic008G092300 Sobic006G056200 Sobic006G056200 Sobic010G269100--Sobic006G056200 Sobic010G239800 Sobic010G239800 Sobic010G269100--Sobic010G239800 Sobic002G268400 Sobic002G268400 Sobic010G269100--Sobic002G268400 Sobic006G278700 Sobic006G278700 Sobic010G269100--Sobic006G278700 Sobic010G085200 Sobic010G085200 Sobic010G269100--Sobic010G085200 Sobic009G033900 Sobic009G033900 Sobic010G269100--Sobic009G033900 Sobic003G099300--Sobic010G269100 Sobic004G039600 Sobic004G039600 Sobic003G099300--Sobic004G039600 Sobic005G216300 Sobic005G216300 Sobic003G099300--Sobic005G216300 SobicK004100 SobicK004100 Sobic003G099300--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic003G099300--Sobic001G369000 Sobic005G115500 Sobic005G115500 Sobic003G099300--Sobic005G115500 Sobic003G099300--Sobic002G256200 Sobic003G099300--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic003G099300--Sobic009G231700 Sobic002G256200--Sobic010G269100 Sobic002G256200--Sobic003G099300 Sobic003G422900 Sobic003G422900 Sobic002G256200--Sobic003G422900 Sobic001G085100 Sobic001G085100 Sobic002G256200--Sobic001G085100 Sobic009G117500 Sobic009G117500 Sobic002G256200--Sobic009G117500 Sobic002G256200--Sobic002G268400 Sobic001G428800 Sobic001G428800 Sobic002G256200--Sobic001G428800 Sobic006G203100 Sobic006G203100 Sobic002G256200--Sobic006G203100 Sobic002G256200--Sobic006G056200 Sobic010G279700 Sobic010G279700 Sobic008G092300--Sobic010G279700 Sobic001G094900 Sobic001G094900 Sobic008G092300--Sobic001G094900 Sobic007G225100 Sobic007G225100 Sobic008G092300--Sobic007G225100 Sobic001G261456 Sobic001G261456 Sobic008G092300--Sobic001G261456 Sobic008G092300--Sobic010G269100 Sobic003G126600 Sobic003G126600 Sobic008G092300--Sobic003G126600 Sobic008G112800 Sobic008G112800 Sobic008G092300--Sobic008G112800 Sobic001G102700 Sobic001G102700 Sobic008G092300--Sobic001G102700 Sobic008G092300--Sobic004G039600 Sobic006G056200--Sobic004G039600 Sobic008G055900 Sobic008G055900 Sobic006G056200--Sobic008G055900 Sobic008G129600 Sobic008G129600 Sobic006G056200--Sobic008G129600 Sobic006G056200--Sobic003G099300 Sobic009G226400 Sobic009G226400 Sobic006G056200--Sobic009G226400 Sobic008G103300 Sobic008G103300 Sobic006G056200--Sobic008G103300 Sobic006G056200--Sobic001G369000 Sobic006G056200--SobicK004100 Sobic002G029300 Sobic002G029300 Sobic006G056200--Sobic002G029300 Sobic010G239800--Sobic003G099300 Sobic007G027700 Sobic007G027700 Sobic010G239800--Sobic007G027700 Sobic010G239800--Sobic010G085200 Sobic010G239800--Sobic010G269100 Sobic006G233300 Sobic006G233300 Sobic010G239800--Sobic006G233300 Sobic010G232900 Sobic010G232900 Sobic010G239800--Sobic010G232900 Sobic010G239800--Sobic010G279700 Sobic010G239800--Sobic008G092300 Sobic002G145800 Sobic002G145800 Sobic010G239800--Sobic002G145800 Sobic010G057900 Sobic010G057900 Sobic002G268400--Sobic010G057900 Sobic001G152000 Sobic001G152000 Sobic002G268400--Sobic001G152000 Sobic004G074300 Sobic004G074300 Sobic002G268400--Sobic004G074300 Sobic006G252100 Sobic006G252100 Sobic002G268400--Sobic006G252100 Sobic002G268400--Sobic009G033900 Sobic006G270900 Sobic006G270900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic004G356900 Sobic004G356900 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800 Sobic002G378200 Sobic002G378200 Sobic006G278700--Sobic002G378200 Sobic006G252700 Sobic006G252700 Sobic006G278700--Sobic006G252700 Sobic007G205000 Sobic007G205000 Sobic006G278700--Sobic007G205000 Sobic001G360200 Sobic001G360200 Sobic006G278700--Sobic001G360200 Sobic003G401100 Sobic003G401100 Sobic006G278700--Sobic003G401100 Sobic001G143500 Sobic001G143500 Sobic006G278700--Sobic001G143500 Sobic001G226000 Sobic001G226000 Sobic006G278700--Sobic001G226000 Sobic007G118200 Sobic007G118200 Sobic006G278700--Sobic007G118200 Sobic008G004400 Sobic008G004400 Sobic006G278700--Sobic008G004400 Sobic005G220000 Sobic005G220000 Sobic010G085200--Sobic005G220000 Sobic002G412700 Sobic002G412700 Sobic010G085200--Sobic002G412700 Sobic006G233000 Sobic006G233000 Sobic010G085200--Sobic006G233000 Sobic009G007700 Sobic009G007700 Sobic010G085200--Sobic009G007700 Sobic010G085200--Sobic010G279700 Sobic010G085200--Sobic010G239800 Sobic007G011600 Sobic007G011600 Sobic010G085200--Sobic007G011600 Sobic003G314700 Sobic003G314700 Sobic010G085200--Sobic003G314700 Sobic003G209400 Sobic003G209400 Sobic010G085200--Sobic003G209400 Sobic009G033900--Sobic006G183000 Sobic009G033900--Sobic002G268400 Sobic001G249700 Sobic001G249700 Sobic009G033900--Sobic001G249700 Sobic009G033900--Sobic004G074300 Sobic001G263000 Sobic001G263000 Sobic009G033900--Sobic001G263000 Sobic009G033900--Sobic001G152000 Sobic004G057800 Sobic004G057800 Sobic009G033900--Sobic004G057800 Sobic009G033900--Sobic010G269100 Sobic009G033900--Sobic006G252100
Octagon: transcription factors


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