Gene annotation
Transcriptome id Sobic.010G239800.1
Synonym TDT, ATDCP2, Sb10g028040, DCP2
Functional annotation hydrolase, NUDIX family, domain containing protein, expressed
UniProt C5Z8E1
Pfam PF00293 PF05026
Panther DB PTHR23114
NCBI CDD KOG2937; Decapping enzyme complex, predicted pyrophosphatase DCP2
KEGG Orthology K12613; mRNA-decapping enzyme subunit 2
Gene Ontology GO:0016787; hydrolase activity GO:0003723RNA binding


Orthologs (automatic annotation)
TAIR AT5G13570 : decapping 2
RAP-DB (Rice) LOC_Os02g56210.1 : hydrolase, NUDIX family, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043940 , Zm00025a051369 , Zm00025a041835
Brachypodium KQK01247 , KQK01248
Barley HORVU6Hr1G088300.2 , HORVU6Hr1G088300.1
Wheat TraesCS6B02G412000 , TraesCS6D02G359000 , TraesCS6B02G412000 , TraesCS6B02G412000 , TraesCS6A02G374200 , TraesCS6A02G374200 , TraesCS6A02G374200
Populus -


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cDNA sequences
Sobic.010G239800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
2 Sobic.007G027700 expressed protein -
3 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
4 Sobic.010G269100 zinc finger family protein, putative, expressed -
5 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
6 Sobic.010G232900 surp module family protein, putative, expressed -
7 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
8 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
9 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
10 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
12 Sobic.010G202500 C2 domain containing protein, putative, expressed -
13 Sobic.004G155600 dnaJ domain containing protein, expressed -
14 Sobic.001G023000 kelch motif family protein, putative, expressed -
15 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
16 Sobic.001G526300 WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
17 Sobic.002G143900 OsFBL19 - F-box domain and LRR containing protein, expressed K10273: F-box and leucine-rich repeat protein 7
18 Sobic.010G176500 expressed protein -
19 Sobic.007G011600 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
20 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial


Gene co-expression network
sample Sobic010G239800 Sobic010G239800 Sobic003G099300 Sobic003G099300 Sobic010G239800--Sobic003G099300 Sobic007G027700 Sobic007G027700 Sobic010G239800--Sobic007G027700 Sobic010G085200 Sobic010G085200 Sobic010G239800--Sobic010G085200 Sobic010G269100 Sobic010G269100 Sobic010G239800--Sobic010G269100 Sobic006G233300 Sobic006G233300 Sobic010G239800--Sobic006G233300 Sobic010G232900 Sobic010G232900 Sobic010G239800--Sobic010G232900 Sobic010G279700 Sobic010G279700 Sobic010G239800--Sobic010G279700 Sobic008G092300 Sobic008G092300 Sobic010G239800--Sobic008G092300 Sobic002G145800 Sobic002G145800 Sobic010G239800--Sobic002G145800 Sobic003G099300--Sobic010G269100 Sobic004G039600 Sobic004G039600 Sobic003G099300--Sobic004G039600 Sobic005G216300 Sobic005G216300 Sobic003G099300--Sobic005G216300 SobicK004100 SobicK004100 Sobic003G099300--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic003G099300--Sobic001G369000 Sobic005G115500 Sobic005G115500 Sobic003G099300--Sobic005G115500 Sobic002G256200 Sobic002G256200 Sobic003G099300--Sobic002G256200 Sobic006G056200 Sobic006G056200 Sobic003G099300--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic003G099300--Sobic009G231700 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic005G220000 Sobic005G220000 Sobic010G085200--Sobic005G220000 Sobic002G412700 Sobic002G412700 Sobic010G085200--Sobic002G412700 Sobic006G233000 Sobic006G233000 Sobic010G085200--Sobic006G233000 Sobic009G007700 Sobic009G007700 Sobic010G085200--Sobic009G007700 Sobic010G085200--Sobic010G279700 Sobic010G085200--Sobic010G239800 Sobic007G011600 Sobic007G011600 Sobic010G085200--Sobic007G011600 Sobic003G314700 Sobic003G314700 Sobic010G085200--Sobic003G314700 Sobic003G209400 Sobic003G209400 Sobic010G085200--Sobic003G209400 Sobic010G269100--Sobic003G099300 Sobic010G269100--Sobic002G256200 Sobic010G269100--Sobic008G092300 Sobic010G269100--Sobic006G056200 Sobic010G269100--Sobic010G239800 Sobic002G268400 Sobic002G268400 Sobic010G269100--Sobic002G268400 Sobic006G278700 Sobic006G278700 Sobic010G269100--Sobic006G278700 Sobic010G269100--Sobic010G085200 Sobic009G033900 Sobic009G033900 Sobic010G269100--Sobic009G033900 Sobic006G010000 Sobic006G010000 Sobic006G233300--Sobic006G010000 Sobic002G143900 Sobic002G143900 Sobic006G233300--Sobic002G143900 Sobic006G233300--Sobic006G233000 Sobic003G158700 Sobic003G158700 Sobic006G233300--Sobic003G158700 Sobic002G394800 Sobic002G394800 Sobic006G233300--Sobic002G394800 Sobic006G233300--Sobic003G099300 Sobic006G233300--Sobic010G239800 Sobic010G247400 Sobic010G247400 Sobic006G233300--Sobic010G247400 Sobic002G280600 Sobic002G280600 Sobic006G233300--Sobic002G280600 Sobic001G042200 Sobic001G042200 Sobic010G232900--Sobic001G042200 Sobic010G232900--Sobic007G027700 Sobic010G232900--Sobic008G127400 Sobic010G232900--Sobic010G239800 Sobic010G232900--Sobic002G280600 Sobic003G187200 Sobic003G187200 Sobic010G232900--Sobic003G187200 Sobic003G006400 Sobic003G006400 Sobic010G232900--Sobic003G006400 Sobic006G204800 Sobic006G204800 Sobic010G232900--Sobic006G204800 Sobic001G526300 Sobic001G526300 Sobic010G232900--Sobic001G526300 Sobic001G281600 Sobic001G281600 Sobic010G279700--Sobic001G281600 Sobic008G083000 Sobic008G083000 Sobic010G279700--Sobic008G083000 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic007G191700 Sobic007G191700 Sobic010G279700--Sobic007G191700 Sobic005G106500 Sobic005G106500 Sobic010G279700--Sobic005G106500 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic004G021200 Sobic004G021200 Sobic010G279700--Sobic004G021200 Sobic008G092300--Sobic010G279700 Sobic008G092300--Sobic001G094900 Sobic007G225100 Sobic007G225100 Sobic008G092300--Sobic007G225100 Sobic001G261456 Sobic001G261456 Sobic008G092300--Sobic001G261456 Sobic008G092300--Sobic010G269100 Sobic003G126600 Sobic003G126600 Sobic008G092300--Sobic003G126600 Sobic008G112800 Sobic008G112800 Sobic008G092300--Sobic008G112800 Sobic001G102700 Sobic001G102700 Sobic008G092300--Sobic001G102700 Sobic008G092300--Sobic004G039600 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic003G416700 Sobic003G416700 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic001G051700 Sobic001G051700 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600
Octagon: transcription factors


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