Gene annotation
Transcriptome id Sobic.010G202500.3,Sobic.010G202500.4
Synonym Sb10g025040
Functional annotation C2 domain containing protein, putative, expressed
UniProt A0A1W0VU19 , A0A1W0VTZ1
Pfam PF00168
Panther DB PTHR10024
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G34150 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os06g43190.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a051425
Brachypodium -
Barley -
Wheat TraesCSU02G173200 , TraesCSU02G173100 , TraesCS7B02G441900 , TraesCS7A02G524400 , TraesCS7A02G524400 , TraesCS7B02G441800
Populus -


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cDNA sequences
Sobic.010G202500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
2 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
3 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
4 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
5 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
6 Sobic.007G027700 expressed protein -
7 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
8 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
9 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
10 Sobic.001G526300 WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
11 Sobic.002G268400 expressed protein -
12 Sobic.003G158700 exocyst complex component 6, putative, expressed -
13 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
14 Sobic.003G220700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
15 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
16 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
17 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
18 Sobic.010G269100 zinc finger family protein, putative, expressed -
19 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
20 Sobic.007G011600 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein


Gene co-expression network
sample Sobic010G202500 Sobic010G202500 Sobic010G239800 Sobic010G239800 Sobic010G202500--Sobic010G239800 Sobic010G085200 Sobic010G085200 Sobic010G202500--Sobic010G085200 Sobic002G280600 Sobic002G280600 Sobic010G202500--Sobic002G280600 Sobic006G233300 Sobic006G233300 Sobic010G202500--Sobic006G233300 Sobic002G394800 Sobic002G394800 Sobic010G202500--Sobic002G394800 Sobic007G027700 Sobic007G027700 Sobic010G202500--Sobic007G027700 Sobic006G252100 Sobic006G252100 Sobic010G202500--Sobic006G252100 Sobic002G357100 Sobic002G357100 Sobic010G202500--Sobic002G357100 Sobic007G191700 Sobic007G191700 Sobic010G202500--Sobic007G191700 Sobic003G099300 Sobic003G099300 Sobic010G239800--Sobic003G099300 Sobic010G239800--Sobic007G027700 Sobic010G239800--Sobic010G085200 Sobic010G269100 Sobic010G269100 Sobic010G239800--Sobic010G269100 Sobic010G239800--Sobic006G233300 Sobic010G232900 Sobic010G232900 Sobic010G239800--Sobic010G232900 Sobic010G279700 Sobic010G279700 Sobic010G239800--Sobic010G279700 Sobic008G092300 Sobic008G092300 Sobic010G239800--Sobic008G092300 Sobic002G145800 Sobic002G145800 Sobic010G239800--Sobic002G145800 Sobic005G220000 Sobic005G220000 Sobic010G085200--Sobic005G220000 Sobic002G412700 Sobic002G412700 Sobic010G085200--Sobic002G412700 Sobic006G233000 Sobic006G233000 Sobic010G085200--Sobic006G233000 Sobic009G007700 Sobic009G007700 Sobic010G085200--Sobic009G007700 Sobic010G085200--Sobic010G279700 Sobic010G085200--Sobic010G239800 Sobic007G011600 Sobic007G011600 Sobic010G085200--Sobic007G011600 Sobic003G314700 Sobic003G314700 Sobic010G085200--Sobic003G314700 Sobic003G209400 Sobic003G209400 Sobic010G085200--Sobic003G209400 Sobic002G143900 Sobic002G143900 Sobic002G280600--Sobic002G143900 Sobic002G280600--Sobic002G394800 Sobic002G280600--Sobic010G232900 Sobic002G280600--Sobic007G027700 Sobic003G123000 Sobic003G123000 Sobic002G280600--Sobic003G123000 Sobic002G280600--Sobic006G233300 Sobic002G280600--Sobic010G239800 Sobic003G273400 Sobic003G273400 Sobic002G280600--Sobic003G273400 Sobic001G526300 Sobic001G526300 Sobic002G280600--Sobic001G526300 Sobic006G010000 Sobic006G010000 Sobic006G233300--Sobic006G010000 Sobic006G233300--Sobic002G143900 Sobic006G233300--Sobic006G233000 Sobic003G158700 Sobic003G158700 Sobic006G233300--Sobic003G158700 Sobic006G233300--Sobic002G394800 Sobic006G233300--Sobic003G099300 Sobic006G233300--Sobic010G239800 Sobic010G247400 Sobic010G247400 Sobic006G233300--Sobic010G247400 Sobic006G233300--Sobic002G280600 Sobic002G394800--Sobic006G233300 Sobic002G394800--Sobic002G143900 Sobic002G394800--Sobic006G233000 Sobic002G394800--Sobic002G280600 Sobic006G245700 Sobic006G245700 Sobic002G394800--Sobic006G245700 Sobic006G272200 Sobic006G272200 Sobic002G394800--Sobic006G272200 Sobic001G370300 Sobic001G370300 Sobic002G394800--Sobic001G370300 Sobic004G249300 Sobic004G249300 Sobic002G394800--Sobic004G249300 Sobic002G430900 Sobic002G430900 Sobic002G394800--Sobic002G430900 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic002G268400 Sobic002G268400 Sobic006G252100--Sobic002G268400 Sobic001G152000 Sobic001G152000 Sobic006G252100--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic006G252100--Sobic009G033900 Sobic006G216000 Sobic006G216000 Sobic006G252100--Sobic006G216000 Sobic003G220700 Sobic003G220700 Sobic006G252100--Sobic003G220700 Sobic006G094600 Sobic006G094600 Sobic006G252100--Sobic006G094600 Sobic001G226100 Sobic001G226100 Sobic006G252100--Sobic001G226100 Sobic004G074300 Sobic004G074300 Sobic006G252100--Sobic004G074300 Sobic006G252100--Sobic001G370300 Sobic004G156500 Sobic004G156500 Sobic002G357100--Sobic004G156500 Sobic006G067600 Sobic006G067600 Sobic002G357100--Sobic006G067600 Sobic006G210000 Sobic006G210000 Sobic002G357100--Sobic006G210000 Sobic009G129600 Sobic009G129600 Sobic002G357100--Sobic009G129600 Sobic007G183300 Sobic007G183300 Sobic002G357100--Sobic007G183300 Sobic007G091600 Sobic007G091600 Sobic002G357100--Sobic007G091600 Sobic009G151200 Sobic009G151200 Sobic002G357100--Sobic009G151200 Sobic008G100100 Sobic008G100100 Sobic002G357100--Sobic008G100100 Sobic004G129300 Sobic004G129300 Sobic002G357100--Sobic004G129300 Sobic010G237900 Sobic010G237900 Sobic007G191700--Sobic010G237900 Sobic007G191700--Sobic007G091600 Sobic007G191700--Sobic004G129300 Sobic007G191700--Sobic001G395100 Sobic005G079800 Sobic005G079800 Sobic007G191700--Sobic005G079800 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G041300 Sobic007G041300 Sobic007G191700--Sobic007G041300 Sobic001G473600 Sobic001G473600 Sobic007G191700--Sobic001G473600
Octagon: transcription factors


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