Gene annotation
Transcriptome id Sobic.001G526300.2
Synonym Sb01g048980, FZR2, CCS52A1
Functional annotation WD repeat-containing protein, putative, expressed
UniProt A0A1Z5SBP2
Pfam PF00076 PF00400
Panther DB PTHR19918 PTHR19918:SF1
NCBI CDD -
KEGG Orthology K03364; cell division cycle 20-like protein 1, cofactor of APC complex
Gene Ontology GO:0003676; nucleic acid binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT4G22910 : FIZZY-related 2
RAP-DB (Rice) LOC_Os03g03150.2 : WD repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a000315 , Zm00025a000316 , Zm00025a053501
Brachypodium KQK23908
Barley HORVU4Hr1G084710.2 , HORVU4Hr1G084710.3 , HORVU4Hr1G084710.1 , HORVU4Hr1G007150.30 , HORVU4Hr1G007150.6
Wheat TraesCS4D02G341200 , TraesCS4B02G346200 , TraesCS4B02G346200 , TraesCS7B02G353500 , TraesCS1B02G166800
Populus -


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cDNA sequences
Sobic.001G526300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027700 expressed protein -
2 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
3 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
4 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
5 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
6 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
7 Sobic.002G143900 OsFBL19 - F-box domain and LRR containing protein, expressed K10273: F-box and leucine-rich repeat protein 7
8 Sobic.006G268300 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
9 Sobic.010G232900 surp module family protein, putative, expressed -
10 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
11 Sobic.006G248500 expressed protein -
12 Sobic.006G281700 DUF803 domain containing, putative, expressed -
13 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
14 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
15 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
16 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
17 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
18 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
19 Sobic.001G078100 expressed protein -
20 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1


Gene co-expression network
sample Sobic001G526300 Sobic001G526300 Sobic007G027700 Sobic007G027700 Sobic001G526300--Sobic007G027700 Sobic009G040800 Sobic009G040800 Sobic001G526300--Sobic009G040800 Sobic001G335900 Sobic001G335900 Sobic001G526300--Sobic001G335900 Sobic010G278600 Sobic010G278600 Sobic001G526300--Sobic010G278600 Sobic003G240700 Sobic003G240700 Sobic001G526300--Sobic003G240700 Sobic009G120500 Sobic009G120500 Sobic001G526300--Sobic009G120500 Sobic002G143900 Sobic002G143900 Sobic001G526300--Sobic002G143900 Sobic006G268300 Sobic006G268300 Sobic001G526300--Sobic006G268300 Sobic010G232900 Sobic010G232900 Sobic001G526300--Sobic010G232900 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic009G040800--Sobic010G278600 Sobic006G091000 Sobic006G091000 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400 Sobic001G369000 Sobic001G369000 Sobic001G335900--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic001G335900--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G335900--Sobic001G518400 Sobic001G170100 Sobic001G170100 Sobic001G335900--Sobic001G170100 Sobic001G335900--Sobic003G240700 Sobic009G229600 Sobic009G229600 Sobic001G335900--Sobic009G229600 Sobic009G049400 Sobic009G049400 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic004G236800 Sobic004G236800 Sobic010G278600--Sobic004G236800 Sobic010G278600--Sobic004G246100 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic001G393700 Sobic001G393700 Sobic010G278600--Sobic001G393700 Sobic003G240700--Sobic001G369000 Sobic003G240700--Sobic001G335900 Sobic003G240700--Sobic001G170100 Sobic003G240700--Sobic006G138000 Sobic003G314700 Sobic003G314700 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic003G240700--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic003G240700--Sobic001G426600 Sobic003G227100 Sobic003G227100 Sobic003G240700--Sobic003G227100 Sobic001G117800 Sobic001G117800 Sobic009G120500--Sobic001G117800 Sobic009G120500--Sobic003G240700 Sobic009G120500--Sobic003G314700 Sobic001G474400 Sobic001G474400 Sobic009G120500--Sobic001G474400 Sobic006G265600 Sobic006G265600 Sobic009G120500--Sobic006G265600 Sobic003G029600 Sobic003G029600 Sobic009G120500--Sobic003G029600 Sobic004G358900 Sobic004G358900 Sobic009G120500--Sobic004G358900 Sobic005G059500 Sobic005G059500 Sobic009G120500--Sobic005G059500 Sobic001G449900 Sobic001G449900 Sobic009G120500--Sobic001G449900 Sobic006G233300 Sobic006G233300 Sobic002G143900--Sobic006G233300 Sobic002G280600 Sobic002G280600 Sobic002G143900--Sobic002G280600 Sobic002G394800 Sobic002G394800 Sobic002G143900--Sobic002G394800 Sobic002G143900--Sobic007G027700 Sobic002G143900--Sobic001G143500 Sobic006G044000 Sobic006G044000 Sobic002G143900--Sobic006G044000 Sobic002G143900--Sobic001G526300 Sobic002G143900--Sobic010G232900 Sobic008G139700 Sobic008G139700 Sobic002G143900--Sobic008G139700 Sobic006G268300--Sobic001G526300 Sobic006G268300--Sobic005G040900 Sobic006G268300--Sobic001G335900 Sobic006G268300--Sobic009G040800 Sobic003G005900 Sobic003G005900 Sobic006G268300--Sobic003G005900 Sobic006G268300--Sobic010G278600 Sobic006G180700 Sobic006G180700 Sobic006G268300--Sobic006G180700 Sobic006G268300--Sobic006G044000 Sobic006G268300--Sobic010G232900 Sobic010G232900--Sobic001G042200 Sobic010G232900--Sobic007G027700 Sobic010G232900--Sobic008G127400 Sobic010G239800 Sobic010G239800 Sobic010G232900--Sobic010G239800 Sobic010G232900--Sobic002G280600 Sobic003G187200 Sobic003G187200 Sobic010G232900--Sobic003G187200 Sobic003G006400 Sobic003G006400 Sobic010G232900--Sobic003G006400 Sobic006G204800 Sobic006G204800 Sobic010G232900--Sobic006G204800 Sobic010G232900--Sobic001G526300
Octagon: transcription factors


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