Gene annotation
Transcriptome id Sobic.001G078100.1
Synonym Sb01g007060
Functional annotation expressed protein
UniProt C5WZA1
Pfam -
Panther DB PTHR14237 PTHR14237:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23520 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os03g55704.1 : expressed protein
MaizeGDB (Corn) Zm00025a016720 , Zm00025a008305
Brachypodium KQK13027 , KQJ86036
Barley HORVU5Hr1G097800.2 , HORVU5Hr1G097800.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G518400 EF hand family protein, putative, expressed -
2 Sobic.001G111600 expressed protein -
3 Sobic.007G027700 expressed protein -
4 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
5 Sobic.003G314700 expressed protein -
6 Sobic.001G094900 protein transport protein Sec23B, putative, expressed K14006: protein transport protein SEC23
7 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.001G026500 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL6 - SBP-box gene family member, expressed -
9 Sobic.006G138000 expressed protein -
10 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
11 Sobic.009G166100 PWWP domain containing protein, expressed -
12 Sobic.001G102700 metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed K01404: leishmanolysin
13 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
14 Sobic.001G384000 expressed protein -
15 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
17 Sobic.001G426600 SH3 domain containing protein, expressed -
18 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
19 Sobic.009G126600 cyclin-dependent kinase D-1, putative, expressed K02202: cyclin-dependent kinase 7
20 Sobic.006G044000 - -


Gene co-expression network
sample Sobic001G078100 Sobic001G078100 Sobic001G518400 Sobic001G518400 Sobic001G078100--Sobic001G518400 Sobic001G111600 Sobic001G111600 Sobic001G078100--Sobic001G111600 Sobic007G027700 Sobic007G027700 Sobic001G078100--Sobic007G027700 Sobic005G220000 Sobic005G220000 Sobic001G078100--Sobic005G220000 Sobic003G314700 Sobic003G314700 Sobic001G078100--Sobic003G314700 Sobic001G094900 Sobic001G094900 Sobic001G078100--Sobic001G094900 Sobic004G325400 Sobic004G325400 Sobic001G078100--Sobic004G325400 Sobic001G026500 Sobic001G026500 Sobic001G078100--Sobic001G026500 Sobic006G138000 Sobic006G138000 Sobic001G078100--Sobic006G138000 Sobic001G170100 Sobic001G170100 Sobic001G518400--Sobic001G170100 Sobic001G518400--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G518400--Sobic001G335900 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic010G275500 Sobic010G275500 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G369000 Sobic001G369000 Sobic001G518400--Sobic001G369000 Sobic002G068100 Sobic002G068100 Sobic001G111600--Sobic002G068100 Sobic003G293200 Sobic003G293200 Sobic001G111600--Sobic003G293200 Sobic005G128400 Sobic005G128400 Sobic001G111600--Sobic005G128400 Sobic001G354600 Sobic001G354600 Sobic001G111600--Sobic001G354600 Sobic001G457900 Sobic001G457900 Sobic001G111600--Sobic001G457900 Sobic010G112100 Sobic010G112100 Sobic001G111600--Sobic010G112100 Sobic001G111600--Sobic010G275500 Sobic001G111600--Sobic005G220000 Sobic002G362800 Sobic002G362800 Sobic001G111600--Sobic002G362800 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic005G220000--Sobic001G111600 Sobic002G145800 Sobic002G145800 Sobic005G220000--Sobic002G145800 Sobic007G183900 Sobic007G183900 Sobic005G220000--Sobic007G183900 Sobic005G220000--Sobic005G128400 Sobic005G220000--Sobic003G293200 Sobic007G183300 Sobic007G183300 Sobic005G220000--Sobic007G183300 Sobic003G062300 Sobic003G062300 Sobic005G220000--Sobic003G062300 Sobic010G085200 Sobic010G085200 Sobic005G220000--Sobic010G085200 Sobic005G220000--Sobic001G026500 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700 Sobic010G279700 Sobic010G279700 Sobic001G094900--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic001G094900--Sobic006G118700 Sobic001G281600 Sobic001G281600 Sobic001G094900--Sobic001G281600 Sobic008G092300 Sobic008G092300 Sobic001G094900--Sobic008G092300 Sobic001G094900--Sobic007G183900 Sobic008G179700 Sobic008G179700 Sobic001G094900--Sobic008G179700 Sobic001G124200 Sobic001G124200 Sobic001G094900--Sobic001G124200 Sobic001G261456 Sobic001G261456 Sobic001G094900--Sobic001G261456 Sobic001G094900--Sobic003G401100 Sobic009G257800 Sobic009G257800 Sobic004G325400--Sobic009G257800 Sobic004G325400--Sobic007G027700 Sobic007G009400 Sobic007G009400 Sobic004G325400--Sobic007G009400 Sobic004G325400--Sobic003G401100 Sobic004G325400--Sobic001G143500 Sobic004G021200 Sobic004G021200 Sobic004G325400--Sobic004G021200 Sobic003G401000 Sobic003G401000 Sobic004G325400--Sobic003G401000 Sobic004G072100 Sobic004G072100 Sobic004G325400--Sobic004G072100 Sobic004G325400--Sobic008G127400 Sobic001G026500--Sobic002G362800 Sobic001G026500--Sobic003G293200 Sobic001G026500--Sobic006G118700 Sobic001G026500--Sobic001G111600 Sobic001G026500--Sobic010G112100 Sobic001G102700 Sobic001G102700 Sobic001G026500--Sobic001G102700 Sobic001G026500--Sobic005G128400 Sobic001G026500--Sobic007G183900 Sobic001G026500--Sobic005G220000 Sobic006G138000--Sobic001G170100 Sobic006G138000--Sobic001G518400 Sobic006G138000--Sobic001G335900 Sobic006G138000--Sobic001G369000 Sobic006G138000--Sobic010G275500 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800
Octagon: transcription factors


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