Gene annotation
Transcriptome id Sobic.001G102700.1,Sobic.001G102700.2
Synonym Sb01g009170
Functional annotation metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed
UniProt A0A1Z5S5E7 , C5WLY5
Pfam PF07974 PF01457
Panther DB PTHR10942 PTHR10942:SF0
NCBI CDD -
KEGG Orthology K01404; leishmanolysin
Gene Ontology GO:0016020; membrane GO:0007155cell adhesion GO:0006508proteolysis GO:0004222metalloendopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G42620 : metalloendopeptidases;zinc ion binding
RAP-DB (Rice) LOC_Os03g52150.1 : metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a008018
Brachypodium KQK13375
Barley HORVU4Hr1G010320.10 , HORVU4Hr1G010320.11 , HORVU4Hr1G010320.12 , HORVU4Hr1G010320.6 , HORVU4Hr1G010320.7 , HORVU4Hr1G010320.4 , HORVU4Hr1G010320.5 , HORVU4Hr1G010320.2 , HORVU4Hr1G010320.3 , HORVU4Hr1G010320.1 , HORVU4Hr1G010320.8 , HORVU4Hr1G010320.9
Wheat TraesCS4B02G062300 , TraesCS4B02G062300 , TraesCS4D02G061300 , TraesCS4D02G061300 , TraesCS4D02G061300 , TraesCS4A02G253000
Populus PNT02925 , PNT02924


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cDNA sequences
Sobic.001G102700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G026500 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL6 - SBP-box gene family member, expressed -
2 Sobic.001G111600 expressed protein -
3 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
4 Sobic.002G313400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12815: DHX38, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
5 Sobic.010G275500 EF hand family protein, putative, expressed -
6 Sobic.008G118200 vesicle tethering family protein, putative, expressed -
7 Sobic.001G094900 protein transport protein Sec23B, putative, expressed K14006: protein transport protein SEC23
8 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
9 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
10 Sobic.010G032900 transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
11 Sobic.007G183900 ubiquitin family protein, putative, expressed -
12 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
13 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
14 Sobic.003G164200 cullin, putative, expressed K03347: CUL1, cullin 1
15 Sobic.003G266001 - -
16 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
17 Sobic.004G158400 AML1, putative, expressed -
18 Sobic.004G257100 transmembrane 9 superfamily member, putative, expressed -
19 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
20 Sobic.001G539016 - -


Gene co-expression network
sample Sobic001G102700 Sobic001G102700 Sobic001G026500 Sobic001G026500 Sobic001G102700--Sobic001G026500 Sobic001G111600 Sobic001G111600 Sobic001G102700--Sobic001G111600 Sobic001G362200 Sobic001G362200 Sobic001G102700--Sobic001G362200 Sobic002G313400 Sobic002G313400 Sobic001G102700--Sobic002G313400 Sobic010G275500 Sobic010G275500 Sobic001G102700--Sobic010G275500 Sobic008G118200 Sobic008G118200 Sobic001G102700--Sobic008G118200 Sobic001G094900 Sobic001G094900 Sobic001G102700--Sobic001G094900 Sobic005G220000 Sobic005G220000 Sobic001G102700--Sobic005G220000 Sobic005G128400 Sobic005G128400 Sobic001G102700--Sobic005G128400 Sobic002G362800 Sobic002G362800 Sobic001G026500--Sobic002G362800 Sobic003G293200 Sobic003G293200 Sobic001G026500--Sobic003G293200 Sobic006G118700 Sobic006G118700 Sobic001G026500--Sobic006G118700 Sobic001G026500--Sobic001G111600 Sobic010G112100 Sobic010G112100 Sobic001G026500--Sobic010G112100 Sobic001G026500--Sobic001G102700 Sobic001G026500--Sobic005G128400 Sobic007G183900 Sobic007G183900 Sobic001G026500--Sobic007G183900 Sobic001G026500--Sobic005G220000 Sobic002G068100 Sobic002G068100 Sobic001G111600--Sobic002G068100 Sobic001G111600--Sobic003G293200 Sobic001G111600--Sobic005G128400 Sobic001G354600 Sobic001G354600 Sobic001G111600--Sobic001G354600 Sobic001G457900 Sobic001G457900 Sobic001G111600--Sobic001G457900 Sobic001G111600--Sobic010G112100 Sobic001G111600--Sobic010G275500 Sobic001G111600--Sobic005G220000 Sobic001G111600--Sobic002G362800 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic003G109700 Sobic003G109700 Sobic001G362200--Sobic003G109700 Sobic006G032900 Sobic006G032900 Sobic001G362200--Sobic006G032900 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic002G134600 Sobic002G134600 Sobic001G362200--Sobic002G134600 Sobic001G362200--Sobic007G183900 Sobic001G219600 Sobic001G219600 Sobic002G313400--Sobic001G219600 Sobic009G260500 Sobic009G260500 Sobic002G313400--Sobic009G260500 Sobic002G309600 Sobic002G309600 Sobic002G313400--Sobic002G309600 Sobic008G011100 Sobic008G011100 Sobic002G313400--Sobic008G011100 Sobic001G002000 Sobic001G002000 Sobic002G313400--Sobic001G002000 Sobic007G117400 Sobic007G117400 Sobic002G313400--Sobic007G117400 Sobic002G313400--Sobic001G111600 Sobic008G047800 Sobic008G047800 Sobic002G313400--Sobic008G047800 Sobic001G493200 Sobic001G493200 Sobic002G313400--Sobic001G493200 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic007G163100 Sobic007G163100 Sobic008G118200--Sobic007G163100 Sobic008G118200--Sobic010G069100 Sobic003G408600 Sobic003G408600 Sobic008G118200--Sobic003G408600 Sobic009G044800 Sobic009G044800 Sobic008G118200--Sobic009G044800 Sobic008G118200--Sobic010G112100 Sobic005G112300 Sobic005G112300 Sobic008G118200--Sobic005G112300 Sobic001G207000 Sobic001G207000 Sobic008G118200--Sobic001G207000 Sobic001G289600 Sobic001G289600 Sobic008G118200--Sobic001G289600 Sobic007G105100 Sobic007G105100 Sobic008G118200--Sobic007G105100 Sobic010G279700 Sobic010G279700 Sobic001G094900--Sobic010G279700 Sobic001G094900--Sobic006G118700 Sobic001G281600 Sobic001G281600 Sobic001G094900--Sobic001G281600 Sobic008G092300 Sobic008G092300 Sobic001G094900--Sobic008G092300 Sobic001G094900--Sobic007G183900 Sobic008G179700 Sobic008G179700 Sobic001G094900--Sobic008G179700 Sobic001G124200 Sobic001G124200 Sobic001G094900--Sobic001G124200 Sobic001G261456 Sobic001G261456 Sobic001G094900--Sobic001G261456 Sobic003G401100 Sobic003G401100 Sobic001G094900--Sobic003G401100 Sobic005G220000--Sobic001G111600 Sobic002G145800 Sobic002G145800 Sobic005G220000--Sobic002G145800 Sobic005G220000--Sobic007G183900 Sobic005G220000--Sobic005G128400 Sobic005G220000--Sobic003G293200 Sobic007G183300 Sobic007G183300 Sobic005G220000--Sobic007G183300 Sobic003G062300 Sobic003G062300 Sobic005G220000--Sobic003G062300 Sobic010G085200 Sobic010G085200 Sobic005G220000--Sobic010G085200 Sobic005G220000--Sobic001G026500 Sobic005G128400--Sobic003G293200 Sobic003G266001 Sobic003G266001 Sobic005G128400--Sobic003G266001 Sobic001G154900 Sobic001G154900 Sobic005G128400--Sobic001G154900 Sobic001G016600 Sobic001G016600 Sobic005G128400--Sobic001G016600 Sobic001G241200 Sobic001G241200 Sobic005G128400--Sobic001G241200 Sobic005G128400--Sobic007G105100 Sobic005G128400--Sobic010G069100 Sobic001G540400 Sobic001G540400 Sobic005G128400--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic005G128400--Sobic005G008800
Octagon: transcription factors


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