Gene annotation
Transcriptome id Sobic.004G158400.1
Synonym AML1, Sb04g021130, ML1
Functional annotation AML1, putative, expressed
UniProt C5XT88
Pfam PF00076 PF04059
Panther DB PTHR24012 PTHR24012:SF390
NCBI CDD KOG4660; Protein Mei2, essential for commitment to meiosis, and related proteins
KEGG Orthology -
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G61960 : MEI2-like protein 1
RAP-DB (Rice) LOC_Os02g31290.2 : AML1, putative, expressed
MaizeGDB (Corn) Zm00025a019312 , Zm00025a031336 , Zm00025a020452 , Zm00025a017304
Brachypodium KQJ99630 , KQJ82362 , KQJ82314 , KQJ82315 , KQJ82316 , KQJ82317 , KQJ82318 , PNT60935 , PNT60936 , PNT60937
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G158400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G159900 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
2 Sobic.005G167700 protein phosphatase 2C, putative, expressed -
3 Sobic.001G261492 - -
4 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
5 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
6 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
7 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
8 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
9 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
10 Sobic.007G183900 ubiquitin family protein, putative, expressed -
11 Sobic.003G266001 - -
12 Sobic.002G154000 EDM2, putative, expressed -
13 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
14 Sobic.001G063700 expressed protein -
15 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
16 Sobic.001G363500 DIRP family protein, putative, expressed -
17 Sobic.010G069100 expressed protein -
18 Sobic.010G123600 WW domain containing protein, expressed -
19 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
20 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140


Gene co-expression network
sample Sobic004G158400 Sobic004G158400 Sobic007G159900 Sobic007G159900 Sobic004G158400--Sobic007G159900 Sobic005G167700 Sobic005G167700 Sobic004G158400--Sobic005G167700 Sobic001G261492 Sobic001G261492 Sobic004G158400--Sobic001G261492 Sobic003G360400 Sobic003G360400 Sobic004G158400--Sobic003G360400 Sobic007G105100 Sobic007G105100 Sobic004G158400--Sobic007G105100 Sobic010G112100 Sobic010G112100 Sobic004G158400--Sobic010G112100 Sobic001G433800 Sobic001G433800 Sobic004G158400--Sobic001G433800 Sobic005G112300 Sobic005G112300 Sobic004G158400--Sobic005G112300 Sobic003G188400 Sobic003G188400 Sobic004G158400--Sobic003G188400 Sobic007G159900--Sobic003G360400 Sobic007G159900--Sobic004G158400 Sobic002G366400 Sobic002G366400 Sobic007G159900--Sobic002G366400 Sobic007G159900--Sobic010G112100 Sobic007G183900 Sobic007G183900 Sobic007G159900--Sobic007G183900 Sobic005G064000 Sobic005G064000 Sobic007G159900--Sobic005G064000 Sobic005G100700 Sobic005G100700 Sobic007G159900--Sobic005G100700 Sobic007G159900--Sobic003G188400 Sobic008G113100 Sobic008G113100 Sobic007G159900--Sobic008G113100 Sobic010G123600 Sobic010G123600 Sobic005G167700--Sobic010G123600 Sobic003G441900 Sobic003G441900 Sobic005G167700--Sobic003G441900 Sobic005G167700--Sobic001G433800 Sobic003G168100 Sobic003G168100 Sobic005G167700--Sobic003G168100 Sobic001G151100 Sobic001G151100 Sobic005G167700--Sobic001G151100 Sobic005G167700--Sobic004G158400 Sobic005G167700--Sobic003G188400 Sobic010G126000 Sobic010G126000 Sobic005G167700--Sobic010G126000 Sobic005G167700--Sobic003G360400 Sobic001G261492--Sobic004G158400 Sobic001G261492--Sobic005G167700 Sobic001G261492--Sobic005G112300 Sobic009G132700 Sobic009G132700 Sobic001G261492--Sobic009G132700 Sobic001G227200 Sobic001G227200 Sobic001G261492--Sobic001G227200 Sobic010G143100 Sobic010G143100 Sobic001G261492--Sobic010G143100 Sobic003G170900 Sobic003G170900 Sobic001G261492--Sobic003G170900 Sobic001G261492--Sobic010G123600 Sobic010G139000 Sobic010G139000 Sobic001G261492--Sobic010G139000 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic001G354600 Sobic001G354600 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic007G105100--Sobic005G112300 Sobic001G289600 Sobic001G289600 Sobic007G105100--Sobic001G289600 Sobic003G408600 Sobic003G408600 Sobic007G105100--Sobic003G408600 Sobic010G010700 Sobic010G010700 Sobic007G105100--Sobic010G010700 Sobic007G062800 Sobic007G062800 Sobic007G105100--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic007G105100--Sobic005G008800 Sobic001G540400 Sobic001G540400 Sobic007G105100--Sobic001G540400 Sobic007G105100--Sobic003G360400 Sobic007G105100--Sobic010G112100 Sobic010G112100--Sobic003G360400 Sobic010G112100--Sobic005G112300 Sobic010G112100--Sobic009G256300 Sobic010G112100--Sobic003G408600 Sobic010G112100--Sobic001G433800 Sobic010G112100--Sobic001G540400 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic010G112100--Sobic003G389200 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic001G433800--Sobic007G063000 Sobic001G433800--Sobic005G112300 Sobic001G433800--Sobic004G242400 Sobic002G133300 Sobic002G133300 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic005G112300--Sobic001G363500 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic005G112300--Sobic010G139000 Sobic005G112300--Sobic007G105100 Sobic005G112300--Sobic001G540400 Sobic005G112300--Sobic010G010700 Sobic005G112300--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic005G112300--Sobic002G071500 Sobic003G188400--Sobic001G433800 Sobic001G063700 Sobic001G063700 Sobic003G188400--Sobic001G063700 Sobic003G188400--Sobic003G360400 Sobic003G188400--Sobic002G133300 Sobic003G095900 Sobic003G095900 Sobic003G188400--Sobic003G095900 Sobic002G317200 Sobic002G317200 Sobic003G188400--Sobic002G317200 Sobic003G188400--Sobic007G159900 Sobic003G188400--Sobic010G112100 Sobic001G311500 Sobic001G311500 Sobic003G188400--Sobic001G311500
Octagon: transcription factors


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