Gene annotation
Transcriptome id Sobic.005G167700.1,Sobic.005G167700.2
Synonym
Functional annotation protein phosphatase 2C, putative, expressed
UniProt A0A1Z5RJM5 , A0A1B6PT06
Pfam PF00069 PF00481
Panther DB PTHR13832 PTHR13832:SF266
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity GO:0003824catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT3G63340 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os11g37540.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a015816 , Zm00025a015819 , Zm00025a015804 , Zm00025a015817 , Zm00025a015824
Brachypodium KQJ88069 , KQJ88071 , KQJ88070
Barley HORVU7Hr1G093200.7 , HORVU7Hr1G093200.6 , HORVU7Hr1G093200.5 , HORVU7Hr1G093200.4 , HORVU7Hr1G093200.3 , HORVU7Hr1G093200.2 , HORVU7Hr1G093200.1 , HORVU7Hr1G093200.9 , HORVU7Hr1G093200.8 , HORVU7Hr1G093200.31 , HORVU7Hr1G093200.30 , HORVU7Hr1G093200.33 , HORVU7Hr1G093200.32 , HORVU7Hr1G093200.35 , HORVU7Hr1G093200.34 , HORVU7Hr1G093200.37 , HORVU7Hr1G093200.36 , HORVU7Hr1G093200.39 , HORVU7Hr1G093200.38 , HORVU7Hr1G093200.26 , HORVU7Hr1G093200.27 , HORVU7Hr1G093200.24 , HORVU7Hr1G093200.25 , HORVU7Hr1G093200.22 , HORVU7Hr1G093200.23 , HORVU7Hr1G093200.20 , HORVU7Hr1G093200.21 , HORVU7Hr1G093200.28 , HORVU7Hr1G093200.29 , HORVU7Hr1G093200.19 , HORVU7Hr1G093200.18 , HORVU7Hr1G093200.17 , HORVU7Hr1G093200.16 , HORVU7Hr1G093200.15 , HORVU7Hr1G093200.14 , HORVU7Hr1G093200.13 , HORVU7Hr1G093200.11 , HORVU7Hr1G093200.10 , HORVU7Hr1G093200.12
Wheat TraesCS7B02G297000 , TraesCS7B02G297000 , TraesCS7A02G395000 , TraesCS7D02G390600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G123600 WW domain containing protein, expressed -
2 Sobic.003G441900 Leucine Rich Repeat family protein, expressed -
3 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
4 Sobic.003G168100 BZIP protein, putative, expressed -
5 Sobic.001G151100 CCR4-NOT transcription factor, putative, expressed K12580: CNOT3, CCR4-NOT transcription complex subunit 3
6 Sobic.004G158400 AML1, putative, expressed -
7 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
8 Sobic.010G126000 WD-40 repeat family protein, putative, expressed -
9 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
10 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
11 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
12 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
13 Sobic.004G134200 GTP binding protein, putative, expressed -
14 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
15 Sobic.009G256300 DNA binding protein, putative, expressed -
16 Sobic.001G542400 CCR4-Not complex component, Not1domain containing protein, expressed K12604: CNOT1, CCR4-NOT transcription complex subunit 1
17 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
18 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
19 Sobic.004G140600 exonuclease, putative, expressed K13288: orn, REX2, oligoribonuclease
20 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic005G167700 Sobic005G167700 Sobic010G123600 Sobic010G123600 Sobic005G167700--Sobic010G123600 Sobic003G441900 Sobic003G441900 Sobic005G167700--Sobic003G441900 Sobic001G433800 Sobic001G433800 Sobic005G167700--Sobic001G433800 Sobic003G168100 Sobic003G168100 Sobic005G167700--Sobic003G168100 Sobic001G151100 Sobic001G151100 Sobic005G167700--Sobic001G151100 Sobic004G158400 Sobic004G158400 Sobic005G167700--Sobic004G158400 Sobic003G188400 Sobic003G188400 Sobic005G167700--Sobic003G188400 Sobic010G126000 Sobic010G126000 Sobic005G167700--Sobic010G126000 Sobic003G360400 Sobic003G360400 Sobic005G167700--Sobic003G360400 Sobic010G010700 Sobic010G010700 Sobic010G123600--Sobic010G010700 Sobic009G256300 Sobic009G256300 Sobic010G123600--Sobic009G256300 Sobic003G170900 Sobic003G170900 Sobic010G123600--Sobic003G170900 Sobic010G123600--Sobic005G167700 Sobic005G112300 Sobic005G112300 Sobic010G123600--Sobic005G112300 Sobic010G123600--Sobic001G433800 Sobic010G112100 Sobic010G112100 Sobic010G123600--Sobic010G112100 Sobic001G194200 Sobic001G194200 Sobic010G123600--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic010G123600--Sobic008G001200 Sobic003G441900--Sobic005G167700 Sobic003G441900--Sobic001G433800 Sobic002G133300 Sobic002G133300 Sobic003G441900--Sobic002G133300 Sobic003G441900--Sobic010G123600 Sobic003G441900--Sobic001G151100 Sobic004G276400 Sobic004G276400 Sobic003G441900--Sobic004G276400 Sobic001G020000 Sobic001G020000 Sobic003G441900--Sobic001G020000 Sobic004G334300 Sobic004G334300 Sobic003G441900--Sobic004G334300 Sobic003G441900--Sobic001G194200 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic007G063000 Sobic007G063000 Sobic001G433800--Sobic007G063000 Sobic001G433800--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic001G433800--Sobic004G242400 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic003G168100--Sobic010G126000 Sobic003G168100--Sobic005G167700 Sobic009G129100 Sobic009G129100 Sobic003G168100--Sobic009G129100 Sobic008G044100 Sobic008G044100 Sobic003G168100--Sobic008G044100 Sobic003G168100--Sobic001G433800 Sobic003G398700 Sobic003G398700 Sobic003G168100--Sobic003G398700 Sobic004G244900 Sobic004G244900 Sobic003G168100--Sobic004G244900 Sobic004G134200 Sobic004G134200 Sobic003G168100--Sobic004G134200 Sobic004G185800 Sobic004G185800 Sobic003G168100--Sobic004G185800 Sobic001G058200 Sobic001G058200 Sobic001G151100--Sobic001G058200 Sobic001G151100--Sobic001G433800 Sobic001G151100--Sobic005G167700 Sobic001G087600 Sobic001G087600 Sobic001G151100--Sobic001G087600 Sobic002G308700 Sobic002G308700 Sobic001G151100--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic001G151100--Sobic005G162500 Sobic001G151100--Sobic002G133300 Sobic001G542400 Sobic001G542400 Sobic001G151100--Sobic001G542400 Sobic004G248600 Sobic004G248600 Sobic001G151100--Sobic004G248600 Sobic007G159900 Sobic007G159900 Sobic004G158400--Sobic007G159900 Sobic004G158400--Sobic005G167700 Sobic001G261492 Sobic001G261492 Sobic004G158400--Sobic001G261492 Sobic004G158400--Sobic003G360400 Sobic007G105100 Sobic007G105100 Sobic004G158400--Sobic007G105100 Sobic004G158400--Sobic010G112100 Sobic004G158400--Sobic001G433800 Sobic004G158400--Sobic005G112300 Sobic004G158400--Sobic003G188400 Sobic003G188400--Sobic001G433800 Sobic001G063700 Sobic001G063700 Sobic003G188400--Sobic001G063700 Sobic003G188400--Sobic003G360400 Sobic003G188400--Sobic002G133300 Sobic003G095900 Sobic003G095900 Sobic003G188400--Sobic003G095900 Sobic002G317200 Sobic002G317200 Sobic003G188400--Sobic002G317200 Sobic003G188400--Sobic007G159900 Sobic003G188400--Sobic010G112100 Sobic001G311500 Sobic001G311500 Sobic003G188400--Sobic001G311500 Sobic010G126000--Sobic003G168100 Sobic010G126000--Sobic008G044100 Sobic002G127550 Sobic002G127550 Sobic010G126000--Sobic002G127550 Sobic010G126000--Sobic005G167700 Sobic001G227200 Sobic001G227200 Sobic010G126000--Sobic001G227200 Sobic006G096900 Sobic006G096900 Sobic010G126000--Sobic006G096900 Sobic010G126000--Sobic003G398700 Sobic001G219600 Sobic001G219600 Sobic010G126000--Sobic001G219600 Sobic007G136800 Sobic007G136800 Sobic010G126000--Sobic007G136800 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic001G354600 Sobic001G354600 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic003G360400--Sobic005G112300 Sobic003G360400--Sobic007G063000 Sobic003G360400--Sobic009G256300
Octagon: transcription factors


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