Gene annotation
Transcriptome id Sobic.001G227200.3
Synonym FMN/FHY, Sb01g019920, ATFMN/FHY
Functional annotation haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
UniProt A0A1Z5S790
Pfam PF13419 PF01687
Panther DB PTHR22749 PTHR22749:SF1
NCBI CDD KOG3110; Riboflavin kinase
KEGG Orthology K00861; RFK, riboflavin kinase
Gene Ontology GO:0009231; riboflavin biosynthetic process GO:0008531riboflavin kinase activity


Orthologs (automatic annotation)
TAIR AT4G21470 : riboflavin kinase/FMN hydrolase
RAP-DB (Rice) LOC_Os10g32730.2 : haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
MaizeGDB (Corn) Zm00025a042374
Brachypodium KQJ84977
Barley HORVU1Hr1G038850.9 , HORVU1Hr1G038850.8 , HORVU1Hr1G038850.2 , HORVU1Hr1G038850.1 , HORVU1Hr1G038850.7 , HORVU1Hr1G038850.6 , HORVU1Hr1G038850.5 , HORVU1Hr1G038850.4 , HORVU1Hr1G038850.13 , HORVU1Hr1G038850.12 , HORVU1Hr1G038850.11 , HORVU1Hr1G038850.10
Wheat TraesCS1A02G146600 , TraesCS1D02G144800 , TraesCS1B02G164900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G140600 exonuclease, putative, expressed K13288: orn, REX2, oligoribonuclease
2 Sobic.009G177500 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
3 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
4 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
5 Sobic.002G343901 - -
6 Sobic.004G258700 PHD-finger family protein, expressed -
7 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
8 Sobic.001G036050 - -
9 Sobic.001G456900 expressed protein -
10 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
11 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -
12 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
13 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
14 Sobic.010G126000 WD-40 repeat family protein, putative, expressed -
15 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
16 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
17 Sobic.010G277500 expressed protein -
18 Sobic.003G101500 dnaJ domain containing protein, expressed -
19 Sobic.008G113100 protein binding protein, putative, expressed -
20 Sobic.003G266001 - -


Gene co-expression network
sample Sobic001G227200 Sobic001G227200 Sobic004G140600 Sobic004G140600 Sobic001G227200--Sobic004G140600 Sobic009G177500 Sobic009G177500 Sobic001G227200--Sobic009G177500 Sobic005G106500 Sobic005G106500 Sobic001G227200--Sobic005G106500 Sobic010G139000 Sobic010G139000 Sobic001G227200--Sobic010G139000 Sobic002G343901 Sobic002G343901 Sobic001G227200--Sobic002G343901 Sobic004G258700 Sobic004G258700 Sobic001G227200--Sobic004G258700 Sobic001G311500 Sobic001G311500 Sobic001G227200--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic001G227200--Sobic001G036050 Sobic001G456900 Sobic001G456900 Sobic001G227200--Sobic001G456900 Sobic004G140600--Sobic001G227200 Sobic004G140600--Sobic009G177500 Sobic008G063300 Sobic008G063300 Sobic004G140600--Sobic008G063300 Sobic009G132700 Sobic009G132700 Sobic004G140600--Sobic009G132700 Sobic001G455600 Sobic001G455600 Sobic004G140600--Sobic001G455600 Sobic004G140600--Sobic010G139000 Sobic004G140600--Sobic002G343901 Sobic001G219600 Sobic001G219600 Sobic004G140600--Sobic001G219600 Sobic001G433800 Sobic001G433800 Sobic004G140600--Sobic001G433800 Sobic009G177500--Sobic001G433800 Sobic009G177500--Sobic001G227200 Sobic005G112300 Sobic005G112300 Sobic009G177500--Sobic005G112300 Sobic009G177500--Sobic004G140600 Sobic008G047800 Sobic008G047800 Sobic009G177500--Sobic008G047800 Sobic010G112100 Sobic010G112100 Sobic009G177500--Sobic010G112100 Sobic007G090430 Sobic007G090430 Sobic009G177500--Sobic007G090430 Sobic001G392300 Sobic001G392300 Sobic009G177500--Sobic001G392300 Sobic009G177500--Sobic002G343901 Sobic005G106500--Sobic001G227200 Sobic005G106500--Sobic004G140600 Sobic005G106500--Sobic001G219600 Sobic010G279700 Sobic010G279700 Sobic005G106500--Sobic010G279700 Sobic007G203200 Sobic007G203200 Sobic005G106500--Sobic007G203200 Sobic001G493200 Sobic001G493200 Sobic005G106500--Sobic001G493200 Sobic009G024400 Sobic009G024400 Sobic005G106500--Sobic009G024400 Sobic003G266001 Sobic003G266001 Sobic005G106500--Sobic003G266001 Sobic006G194400 Sobic006G194400 Sobic005G106500--Sobic006G194400 Sobic004G314000 Sobic004G314000 Sobic010G139000--Sobic004G314000 Sobic010G139000--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic010G139000--Sobic010G279450 Sobic010G206900 Sobic010G206900 Sobic010G139000--Sobic010G206900 Sobic010G139000--Sobic001G311500 Sobic010G139000--Sobic001G036050 Sobic010G139000--Sobic010G112100 Sobic010G010700 Sobic010G010700 Sobic010G139000--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic010G139000--Sobic005G008800 Sobic002G180666 Sobic002G180666 Sobic002G343901--Sobic002G180666 Sobic006G216800 Sobic006G216800 Sobic002G343901--Sobic006G216800 Sobic002G343901--Sobic009G177500 Sobic003G148000 Sobic003G148000 Sobic002G343901--Sobic003G148000 Sobic002G343901--Sobic001G227200 Sobic008G162900 Sobic008G162900 Sobic002G343901--Sobic008G162900 Sobic002G343901--Sobic004G140600 Sobic002G133400 Sobic002G133400 Sobic002G343901--Sobic002G133400 Sobic002G343901--Sobic005G112300 Sobic008G113100 Sobic008G113100 Sobic004G258700--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G258700--Sobic008G028700 Sobic004G258700--Sobic001G456900 Sobic004G258700--Sobic003G148000 Sobic003G101500 Sobic003G101500 Sobic004G258700--Sobic003G101500 Sobic010G277500 Sobic010G277500 Sobic004G258700--Sobic010G277500 Sobic007G065400 Sobic007G065400 Sobic004G258700--Sobic007G065400 Sobic007G161000 Sobic007G161000 Sobic004G258700--Sobic007G161000 Sobic009G040600 Sobic009G040600 Sobic004G258700--Sobic009G040600 Sobic001G311500--Sobic010G139000 Sobic009G247400 Sobic009G247400 Sobic001G311500--Sobic009G247400 Sobic001G311500--Sobic005G112300 Sobic003G059750 Sobic003G059750 Sobic001G311500--Sobic003G059750 Sobic008G009700 Sobic008G009700 Sobic001G311500--Sobic008G009700 Sobic001G311500--Sobic004G314000 Sobic001G311500--Sobic010G279450 Sobic001G311500--Sobic008G028700 Sobic001G363500 Sobic001G363500 Sobic001G311500--Sobic001G363500 Sobic001G036050--Sobic010G139000 Sobic001G036050--Sobic001G456900 Sobic004G096600 Sobic004G096600 Sobic001G036050--Sobic004G096600 Sobic001G036050--Sobic002G133400 Sobic001G036050--Sobic006G216800 Sobic001G036050--Sobic004G314000 Sobic001G036050--Sobic004G258700 Sobic010G123600 Sobic010G123600 Sobic001G036050--Sobic010G123600 Sobic003G170900 Sobic003G170900 Sobic001G036050--Sobic003G170900 Sobic001G456900--Sobic001G036050 Sobic001G456900--Sobic010G139000 Sobic001G456900--Sobic004G258700 Sobic001G456900--Sobic008G113100 Sobic001G456900--Sobic008G028700 Sobic001G456900--Sobic002G180666 Sobic001G456900--Sobic001G311500 Sobic003G398700 Sobic003G398700 Sobic001G456900--Sobic003G398700 Sobic001G456900--Sobic003G101500
Octagon: transcription factors


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