Gene annotation
| Transcriptome id | Sobic.001G384300.1,Sobic.001G384300.2,Sobic.001G384300.3 |
|---|---|
| Synonym | AtPHR1, PHR1, Sb01g036440 |
| Functional annotation | myb-like DNA-binding domain containing protein, expressed |
| UniProt | A0A1B6QNE8 |
| Pfam | PF14379 PF00249 PF00249 PF14379 |
| Panther DB | PTHR31314 PTHR31314:SF21 PTHR31314:SF21 PTHR31314 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G28610 : phosphate starvation response 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g21240.1 : myb-like DNA-binding domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a002309 |
| Brachypodium | KQK21858 , KQK21857 |
| Barley | - |
| Wheat | TraesCS4A02G131700 , TraesCS4A02G131700 , TraesCS4A02G131700 , TraesCS4A02G131700 , TraesCS4A02G131700 , TraesCS4B02G172900 , TraesCS4B02G172900 , TraesCS4B02G172900 , TraesCS4D02G175000 , TraesCS4D02G175000 , TraesCS4D02G175000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G090430 | - | - |
| 2 | Sobic.006G096900 | expressed protein | - |
| 3 | Sobic.002G083500 | OsFBX136 - F-box domain containing protein, expressed | - |
| 4 | Sobic.001G227200 | haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed | K00861: RFK, riboflavin kinase |
| 5 | Sobic.002G343901 | - | - |
| 6 | Sobic.001G433800 | lissencephaly type-1-like homology motif, putative, expressed | - |
| 7 | Sobic.001G456900 | expressed protein | - |
| 8 | Sobic.008G113100 | protein binding protein, putative, expressed | - |
| 9 | Sobic.008G162900 | peroxisome assembly protein, putative, expressed | K06664: PEX2, peroxin-2 |
| 10 | Sobic.003G059750 | - | K11797: PHIP, PH-interacting protein |
| 11 | Sobic.001G311500 | N-acetylglucosaminyl transferase component, putative, expressed | K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q |
| 12 | Sobic.003G184699 | - | - |
| 13 | Sobic.009G177500 | CCR4-NOT transcription factor, putative, expressed | K12605: CNOT2, CCR4-NOT transcription complex subunit 2 |
| 14 | Sobic.010G139000 | surp module family protein, putative, expressed | K13123: G patch domain-containing protein 1 |
| 15 | Sobic.005G207500 | AAA-type ATPase family protein, putative, expressed | - |
| 16 | Sobic.007G159900 | ubiquitin carboxyl-terminal hydrolase family protein, expressed | K11855: ubiquitin carboxyl-terminal hydrolase 36/42 |
| 17 | Sobic.005G167700 | protein phosphatase 2C, putative, expressed | - |
| 18 | Sobic.006G216800 | AAA family ATPase, putative, expressed | K13339: PEX6, peroxin-6 |
| 19 | Sobic.005G112300 | ubiquitin carboxyl-terminal hydrolase 5, putative, expressed | K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11 |
| 20 | Sobic.001G026200 | heat shock protein DnaJ, putative, expressed | K09534: DnaJ homolog subfamily C member 14 |
Gene co-expression network
Octagon: transcription factors


