Gene annotation
Transcriptome id Sobic.005G128400.1
Synonym ATCPL3, Sb05g019010, CPL3
Functional annotation NLI interacting factor-like phosphatase, putative, expressed
UniProt A0A1B6PS39
Pfam PF00533 PF03031
Panther DB PTHR23081 PTHR23081:SF2
NCBI CDD -
KEGG Orthology K18999; RNA polymerase II C-terminal domain phosphatase-like 3/4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33540 : C-terminal domain phosphatase-like 3
RAP-DB (Rice) LOC_Os11g31890.1 : NLI interacting factor-like phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a029797
Brachypodium KQJ88441
Barley HORVU4Hr1G042450.18 , HORVU4Hr1G042450.17 , HORVU4Hr1G042450.16 , HORVU4Hr1G042450.15 , HORVU4Hr1G042450.14 , HORVU4Hr1G042450.13 , HORVU4Hr1G042450.12 , HORVU4Hr1G042450.11 , HORVU4Hr1G042450.10 , HORVU4Hr1G042450.19 , HORVU4Hr1G042450.7 , HORVU4Hr1G042450.6 , HORVU4Hr1G042450.5 , HORVU4Hr1G042450.4 , HORVU4Hr1G042450.3 , HORVU4Hr1G042450.2 , HORVU4Hr1G042450.1 , HORVU4Hr1G042450.9 , HORVU4Hr1G042450.8 , HORVU4Hr1G042450.20
Wheat TraesCS4A02G143100 , TraesCS4A02G143100 , TraesCS4D02G154200 , TraesCS4A02G143100 , TraesCS4B02G161600 , TraesCS4B02G161600
Populus -


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cDNA sequences
Sobic.005G128400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G293200 plus-3 domain containing protein, expressed -
2 Sobic.003G266001 - -
3 Sobic.001G154900 "GL3.1/qGL3(Ortholog in rice:Qi et al., 2012, Zhang et al., 2012)"(PubMedID : 31659834)@serine/threonine protein phosphatase, putative, expressed -
4 Sobic.001G016600 FAR1 family protein, expressed -
5 Sobic.001G241200 protein kinase domain containing protein, expressed -
6 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
7 Sobic.010G069100 expressed protein -
8 Sobic.001G540400 expressed protein -
9 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
10 Sobic.007G117400 expressed protein -
11 Sobic.001G111600 expressed protein -
12 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
13 Sobic.001G289600 BAH domain containing protein, putative, expressed -
14 Sobic.004G158400 AML1, putative, expressed -
15 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
16 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
17 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
18 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
19 Sobic.009G005500 expressed protein -
20 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha


Gene co-expression network
sample Sobic005G128400 Sobic005G128400 Sobic003G293200 Sobic003G293200 Sobic005G128400--Sobic003G293200 Sobic003G266001 Sobic003G266001 Sobic005G128400--Sobic003G266001 Sobic001G154900 Sobic001G154900 Sobic005G128400--Sobic001G154900 Sobic001G016600 Sobic001G016600 Sobic005G128400--Sobic001G016600 Sobic001G241200 Sobic001G241200 Sobic005G128400--Sobic001G241200 Sobic007G105100 Sobic007G105100 Sobic005G128400--Sobic007G105100 Sobic010G069100 Sobic010G069100 Sobic005G128400--Sobic010G069100 Sobic001G540400 Sobic001G540400 Sobic005G128400--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic005G128400--Sobic005G008800 Sobic010G001100 Sobic010G001100 Sobic003G293200--Sobic010G001100 Sobic009G166100 Sobic009G166100 Sobic003G293200--Sobic009G166100 Sobic003G293200--Sobic005G128400 Sobic004G009600 Sobic004G009600 Sobic003G293200--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic003G293200--Sobic010G065300 Sobic004G264300 Sobic004G264300 Sobic003G293200--Sobic004G264300 Sobic007G031600 Sobic007G031600 Sobic003G293200--Sobic007G031600 Sobic007G117400 Sobic007G117400 Sobic003G293200--Sobic007G117400 Sobic001G111600 Sobic001G111600 Sobic003G293200--Sobic001G111600 Sobic001G493200 Sobic001G493200 Sobic003G266001--Sobic001G493200 Sobic003G266001--Sobic005G128400 Sobic008G103200 Sobic008G103200 Sobic003G266001--Sobic008G103200 Sobic003G266001--Sobic010G069100 Sobic003G408600 Sobic003G408600 Sobic003G266001--Sobic003G408600 Sobic004G072100 Sobic004G072100 Sobic003G266001--Sobic004G072100 Sobic004G021200 Sobic004G021200 Sobic003G266001--Sobic004G021200 Sobic001G311500 Sobic001G311500 Sobic003G266001--Sobic001G311500 Sobic007G159900 Sobic007G159900 Sobic003G266001--Sobic007G159900 Sobic002G309600 Sobic002G309600 Sobic001G154900--Sobic002G309600 Sobic001G289600 Sobic001G289600 Sobic001G154900--Sobic001G289600 Sobic001G154900--Sobic001G241200 Sobic001G154900--Sobic010G069100 Sobic001G154900--Sobic005G008800 Sobic001G154900--Sobic007G117400 Sobic004G065100 Sobic004G065100 Sobic001G154900--Sobic004G065100 Sobic001G154900--Sobic004G009600 Sobic001G154900--Sobic007G105100 Sobic005G112300 Sobic005G112300 Sobic001G016600--Sobic005G112300 Sobic001G016600--Sobic005G128400 Sobic001G363500 Sobic001G363500 Sobic001G016600--Sobic001G363500 Sobic001G016600--Sobic001G241200 Sobic001G016600--Sobic007G105100 Sobic001G016600--Sobic001G289600 Sobic003G229500 Sobic003G229500 Sobic001G016600--Sobic003G229500 Sobic001G002000 Sobic001G002000 Sobic001G016600--Sobic001G002000 Sobic001G016600--Sobic001G540400 Sobic001G241200--Sobic007G117400 Sobic001G241200--Sobic005G112300 Sobic001G241200--Sobic004G065100 Sobic001G241200--Sobic002G309600 Sobic001G241200--Sobic005G008800 Sobic008G009700 Sobic008G009700 Sobic001G241200--Sobic008G009700 Sobic001G241200--Sobic001G154900 Sobic003G119000 Sobic003G119000 Sobic001G241200--Sobic003G119000 Sobic001G241200--Sobic001G540400 Sobic007G105100--Sobic005G112300 Sobic007G105100--Sobic001G289600 Sobic007G105100--Sobic003G408600 Sobic010G010700 Sobic010G010700 Sobic007G105100--Sobic010G010700 Sobic007G062800 Sobic007G062800 Sobic007G105100--Sobic007G062800 Sobic007G105100--Sobic005G008800 Sobic007G105100--Sobic001G540400 Sobic003G360400 Sobic003G360400 Sobic007G105100--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic007G105100--Sobic010G112100 Sobic002G071500 Sobic002G071500 Sobic010G069100--Sobic002G071500 Sobic002G264200 Sobic002G264200 Sobic010G069100--Sobic002G264200 Sobic010G069100--Sobic005G112300 Sobic008G047800 Sobic008G047800 Sobic010G069100--Sobic008G047800 Sobic010G069100--Sobic008G009700 Sobic010G069100--Sobic001G154900 Sobic004G146500 Sobic004G146500 Sobic010G069100--Sobic004G146500 Sobic007G065400 Sobic007G065400 Sobic010G069100--Sobic007G065400 Sobic009G005500 Sobic009G005500 Sobic010G069100--Sobic009G005500 Sobic001G540400--Sobic001G289600 Sobic001G540400--Sobic003G408600 Sobic001G540400--Sobic007G062800 Sobic001G540400--Sobic005G008800 Sobic004G034900 Sobic004G034900 Sobic001G540400--Sobic004G034900 Sobic001G540400--Sobic005G112300 Sobic003G422500 Sobic003G422500 Sobic001G540400--Sobic003G422500 Sobic002G397500 Sobic002G397500 Sobic001G540400--Sobic002G397500 Sobic001G540400--Sobic010G112100 Sobic005G008800--Sobic001G540400 Sobic005G008800--Sobic003G408600 Sobic005G008800--Sobic005G112300 Sobic005G008800--Sobic007G062800 Sobic005G008800--Sobic001G289600 Sobic004G314000 Sobic004G314000 Sobic005G008800--Sobic004G314000 Sobic005G008800--Sobic008G009700 Sobic001G289800 Sobic001G289800 Sobic005G008800--Sobic001G289800 Sobic009G109200 Sobic009G109200 Sobic005G008800--Sobic009G109200
Octagon: transcription factors


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