Gene annotation
Transcriptome id Sobic.001G111600.1,Sobic.001G111600.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6QIE8 , A0A1B6QIF7
Pfam PF07714
Panther DB PTHR24058 PTHR24058:SF23
NCBI CDD KOG0667; Dual-specificity tyrosine-phosphorylation regulated kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G73460 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g51020.1 : expressed protein
MaizeGDB (Corn) Zm00025a047004 , Zm00025a016931 , Zm00025a007913
Brachypodium KQK13498
Barley HORVU4Hr1G008530.2 , HORVU4Hr1G008530.4 , HORVU4Hr1G008530.3 , HORVU4Hr1G008530.1
Wheat TraesCS4B02G051900 , TraesCS4A02G263100 , TraesCS4D02G052100
Populus -


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cDNA sequences
Sobic.001G111600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G068100 aminoacyl-tRNA synthetase, putative, expressed -
2 Sobic.003G293200 plus-3 domain containing protein, expressed -
3 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
4 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
5 Sobic.001G457900 expressed protein -
6 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
7 Sobic.010G275500 EF hand family protein, putative, expressed -
8 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
9 Sobic.002G362800 formin-like protein 20, putative, expressed K02184: formin 2
10 Sobic.010G069100 expressed protein -
11 Sobic.001G026500 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL6 - SBP-box gene family member, expressed -
12 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
13 Sobic.009G166100 PWWP domain containing protein, expressed -
14 Sobic.007G183900 ubiquitin family protein, putative, expressed -
15 Sobic.002G313400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12815: DHX38, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
16 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
17 Sobic.010G001100 chromo domain containing protein, expressed -
18 Sobic.001G063700 expressed protein -
19 Sobic.001G363500 DIRP family protein, putative, expressed -
20 Sobic.002G154000 EDM2, putative, expressed -


Gene co-expression network
sample Sobic001G111600 Sobic001G111600 Sobic002G068100 Sobic002G068100 Sobic001G111600--Sobic002G068100 Sobic003G293200 Sobic003G293200 Sobic001G111600--Sobic003G293200 Sobic005G128400 Sobic005G128400 Sobic001G111600--Sobic005G128400 Sobic001G354600 Sobic001G354600 Sobic001G111600--Sobic001G354600 Sobic001G457900 Sobic001G457900 Sobic001G111600--Sobic001G457900 Sobic010G112100 Sobic010G112100 Sobic001G111600--Sobic010G112100 Sobic010G275500 Sobic010G275500 Sobic001G111600--Sobic010G275500 Sobic005G220000 Sobic005G220000 Sobic001G111600--Sobic005G220000 Sobic002G362800 Sobic002G362800 Sobic001G111600--Sobic002G362800 Sobic002G068100--Sobic001G111600 Sobic002G068100--Sobic001G354600 Sobic003G360400 Sobic003G360400 Sobic002G068100--Sobic003G360400 Sobic004G096400 Sobic004G096400 Sobic002G068100--Sobic004G096400 Sobic004G158400 Sobic004G158400 Sobic002G068100--Sobic004G158400 Sobic006G240100 Sobic006G240100 Sobic002G068100--Sobic006G240100 Sobic002G154000 Sobic002G154000 Sobic002G068100--Sobic002G154000 Sobic002G137200 Sobic002G137200 Sobic002G068100--Sobic002G137200 Sobic002G299700 Sobic002G299700 Sobic002G068100--Sobic002G299700 Sobic010G001100 Sobic010G001100 Sobic003G293200--Sobic010G001100 Sobic009G166100 Sobic009G166100 Sobic003G293200--Sobic009G166100 Sobic003G293200--Sobic005G128400 Sobic004G009600 Sobic004G009600 Sobic003G293200--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic003G293200--Sobic010G065300 Sobic004G264300 Sobic004G264300 Sobic003G293200--Sobic004G264300 Sobic007G031600 Sobic007G031600 Sobic003G293200--Sobic007G031600 Sobic007G117400 Sobic007G117400 Sobic003G293200--Sobic007G117400 Sobic003G293200--Sobic001G111600 Sobic005G128400--Sobic003G293200 Sobic003G266001 Sobic003G266001 Sobic005G128400--Sobic003G266001 Sobic001G154900 Sobic001G154900 Sobic005G128400--Sobic001G154900 Sobic001G016600 Sobic001G016600 Sobic005G128400--Sobic001G016600 Sobic001G241200 Sobic001G241200 Sobic005G128400--Sobic001G241200 Sobic007G105100 Sobic007G105100 Sobic005G128400--Sobic007G105100 Sobic010G069100 Sobic010G069100 Sobic005G128400--Sobic010G069100 Sobic001G540400 Sobic001G540400 Sobic005G128400--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic005G128400--Sobic005G008800 Sobic001G354600--Sobic003G360400 Sobic001G354600--Sobic010G112100 Sobic001G433800 Sobic001G433800 Sobic001G354600--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic001G354600--Sobic004G048800 Sobic001G354600--Sobic007G105100 Sobic002G133300 Sobic002G133300 Sobic001G354600--Sobic002G133300 Sobic001G063700 Sobic001G063700 Sobic001G354600--Sobic001G063700 Sobic001G354600--Sobic002G068100 Sobic009G044800 Sobic009G044800 Sobic001G354600--Sobic009G044800 Sobic001G457900--Sobic002G133300 Sobic003G196300 Sobic003G196300 Sobic001G457900--Sobic003G196300 Sobic001G117200 Sobic001G117200 Sobic001G457900--Sobic001G117200 Sobic008G092600 Sobic008G092600 Sobic001G457900--Sobic008G092600 Sobic001G273700 Sobic001G273700 Sobic001G457900--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G457900--Sobic003G072200 Sobic003G428100 Sobic003G428100 Sobic001G457900--Sobic003G428100 Sobic001G196500 Sobic001G196500 Sobic001G457900--Sobic001G196500 Sobic003G229500 Sobic003G229500 Sobic001G457900--Sobic003G229500 Sobic010G112100--Sobic003G360400 Sobic005G112300 Sobic005G112300 Sobic010G112100--Sobic005G112300 Sobic009G256300 Sobic009G256300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic010G112100--Sobic001G433800 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic003G389200 Sobic003G389200 Sobic010G112100--Sobic003G389200 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic005G220000--Sobic001G111600 Sobic002G145800 Sobic002G145800 Sobic005G220000--Sobic002G145800 Sobic005G220000--Sobic007G183900 Sobic005G220000--Sobic005G128400 Sobic005G220000--Sobic003G293200 Sobic007G183300 Sobic007G183300 Sobic005G220000--Sobic007G183300 Sobic003G062300 Sobic003G062300 Sobic005G220000--Sobic003G062300 Sobic010G085200 Sobic010G085200 Sobic005G220000--Sobic010G085200 Sobic001G026500 Sobic001G026500 Sobic005G220000--Sobic001G026500 Sobic002G362800--Sobic001G026500 Sobic002G362800--Sobic010G112100 Sobic002G362800--Sobic001G111600 Sobic002G362800--Sobic001G063700 Sobic002G362800--Sobic002G154000 Sobic002G362800--Sobic003G293200 Sobic002G362800--Sobic003G360400 Sobic007G168300 Sobic007G168300 Sobic002G362800--Sobic007G168300 Sobic008G009700 Sobic008G009700 Sobic002G362800--Sobic008G009700
Octagon: transcription factors


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