Gene annotation
Transcriptome id Sobic.003G293200.1
Synonym Sb03g034370
Functional annotation plus-3 domain containing protein, expressed
UniProt C5XK15
Pfam PF02213 PF02201 PF03126
Panther DB PTHR22884 PTHR22884:SF339
NCBI CDD KOG1946; RNA polymerase I transcription factor UAF
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G16485 : nucleic acid binding;zinc ion binding;DNA binding
RAP-DB (Rice) LOC_Os09g36090.1 : plus-3 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000194 , Zm00025a040056 , Zm00025a053532 , Zm00025a045644 , Zm00025a027543
Brachypodium PNT65008 , KQJ91160 , KQJ91159
Barley HORVU5Hr1G081290.11 , HORVU5Hr1G081290.10 , HORVU5Hr1G081290.5 , HORVU5Hr1G081290.4 , HORVU5Hr1G081290.7 , HORVU5Hr1G081290.6 , HORVU5Hr1G081290.3 , HORVU5Hr1G081290.9 , HORVU5Hr1G081290.8
Wheat TraesCS5B02G318700 , TraesCS5B02G318700 , TraesCS5B02G318700 , TraesCS5A02G318200 , TraesCS5A02G318200 , TraesCS5A02G318200 , TraesCS5A02G318200 , TraesCS5D02G324500 , TraesCS5D02G324500 , TraesCS5D02G324500 , TraesCS5D02G324500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G001100 chromo domain containing protein, expressed -
2 Sobic.009G166100 PWWP domain containing protein, expressed -
3 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
4 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
5 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
6 Sobic.004G264300 nuclear matrix constituent protein 1-like, putative, expressed -
7 Sobic.007G031600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
8 Sobic.007G117400 expressed protein -
9 Sobic.001G111600 expressed protein -
10 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
11 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
12 Sobic.010G069100 expressed protein -
13 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
14 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
16 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
17 Sobic.001G241200 protein kinase domain containing protein, expressed -
18 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
19 Sobic.001G154900 "GL3.1/qGL3(Ortholog in rice:Qi et al., 2012, Zhang et al., 2012)"(PubMedID : 31659834)@serine/threonine protein phosphatase, putative, expressed -
20 Sobic.001G542700 expressed protein -


Gene co-expression network
sample Sobic003G293200 Sobic003G293200 Sobic010G001100 Sobic010G001100 Sobic003G293200--Sobic010G001100 Sobic009G166100 Sobic009G166100 Sobic003G293200--Sobic009G166100 Sobic005G128400 Sobic005G128400 Sobic003G293200--Sobic005G128400 Sobic004G009600 Sobic004G009600 Sobic003G293200--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic003G293200--Sobic010G065300 Sobic004G264300 Sobic004G264300 Sobic003G293200--Sobic004G264300 Sobic007G031600 Sobic007G031600 Sobic003G293200--Sobic007G031600 Sobic007G117400 Sobic007G117400 Sobic003G293200--Sobic007G117400 Sobic001G111600 Sobic001G111600 Sobic003G293200--Sobic001G111600 Sobic010G001100--Sobic010G065300 Sobic004G048800 Sobic004G048800 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic010G001100--Sobic003G293200 Sobic004G242400 Sobic004G242400 Sobic010G001100--Sobic004G242400 Sobic009G109200 Sobic009G109200 Sobic010G001100--Sobic009G109200 Sobic002G154000 Sobic002G154000 Sobic010G001100--Sobic002G154000 Sobic001G352900 Sobic001G352900 Sobic010G001100--Sobic001G352900 Sobic009G256300 Sobic009G256300 Sobic010G001100--Sobic009G256300 Sobic009G166100--Sobic003G293200 Sobic009G166100--Sobic004G009600 Sobic009G166100--Sobic007G031600 Sobic009G166100--Sobic010G001100 Sobic001G542700 Sobic001G542700 Sobic009G166100--Sobic001G542700 Sobic009G166100--Sobic001G111600 Sobic009G166100--Sobic007G117400 Sobic010G069100 Sobic010G069100 Sobic009G166100--Sobic010G069100 Sobic009G166100--Sobic010G065300 Sobic005G128400--Sobic003G293200 Sobic003G266001 Sobic003G266001 Sobic005G128400--Sobic003G266001 Sobic001G154900 Sobic001G154900 Sobic005G128400--Sobic001G154900 Sobic001G016600 Sobic001G016600 Sobic005G128400--Sobic001G016600 Sobic001G241200 Sobic001G241200 Sobic005G128400--Sobic001G241200 Sobic007G105100 Sobic007G105100 Sobic005G128400--Sobic007G105100 Sobic005G128400--Sobic010G069100 Sobic001G540400 Sobic001G540400 Sobic005G128400--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic005G128400--Sobic005G008800 Sobic009G040600 Sobic009G040600 Sobic004G009600--Sobic009G040600 Sobic008G028700 Sobic008G028700 Sobic004G009600--Sobic008G028700 Sobic009G260500 Sobic009G260500 Sobic004G009600--Sobic009G260500 Sobic010G279450 Sobic010G279450 Sobic004G009600--Sobic010G279450 Sobic002G309600 Sobic002G309600 Sobic004G009600--Sobic002G309600 Sobic004G009600--Sobic007G117400 Sobic004G009600--Sobic003G293200 Sobic001G363500 Sobic001G363500 Sobic004G009600--Sobic001G363500 Sobic010G277500 Sobic010G277500 Sobic004G009600--Sobic010G277500 Sobic010G065300--Sobic010G001100 Sobic008G009700 Sobic008G009700 Sobic010G065300--Sobic008G009700 Sobic002G153700 Sobic002G153700 Sobic010G065300--Sobic002G153700 Sobic001G306900 Sobic001G306900 Sobic010G065300--Sobic001G306900 Sobic001G134300 Sobic001G134300 Sobic010G065300--Sobic001G134300 Sobic010G065300--Sobic003G293200 Sobic009G119000 Sobic009G119000 Sobic010G065300--Sobic009G119000 Sobic004G156500 Sobic004G156500 Sobic010G065300--Sobic004G156500 Sobic010G065300--Sobic004G048800 Sobic004G264300--Sobic003G293200 Sobic004G039200 Sobic004G039200 Sobic004G264300--Sobic004G039200 Sobic004G264300--Sobic007G117400 Sobic006G052300 Sobic006G052300 Sobic004G264300--Sobic006G052300 Sobic004G145500 Sobic004G145500 Sobic004G264300--Sobic004G145500 Sobic007G054400 Sobic007G054400 Sobic004G264300--Sobic007G054400 Sobic009G024000 Sobic009G024000 Sobic004G264300--Sobic009G024000 Sobic004G264300--Sobic004G009600 Sobic001G124000 Sobic001G124000 Sobic004G264300--Sobic001G124000 Sobic007G031600--Sobic003G293200 Sobic007G031600--Sobic009G166100 Sobic006G210000 Sobic006G210000 Sobic007G031600--Sobic006G210000 Sobic008G100100 Sobic008G100100 Sobic007G031600--Sobic008G100100 Sobic007G031600--Sobic004G156500 Sobic001G170100 Sobic001G170100 Sobic007G031600--Sobic001G170100 Sobic008G131000 Sobic008G131000 Sobic007G031600--Sobic008G131000 Sobic007G031600--Sobic001G352900 Sobic007G031600--Sobic004G009600 Sobic007G117400--Sobic002G309600 Sobic007G117400--Sobic001G241200 Sobic004G065100 Sobic004G065100 Sobic007G117400--Sobic004G065100 Sobic007G161000 Sobic007G161000 Sobic007G117400--Sobic007G161000 Sobic003G280800 Sobic003G280800 Sobic007G117400--Sobic003G280800 Sobic007G117400--Sobic004G009600 Sobic007G117400--Sobic001G154900 Sobic007G117400--Sobic009G040600 Sobic007G117400--Sobic005G008800 Sobic002G068100 Sobic002G068100 Sobic001G111600--Sobic002G068100 Sobic001G111600--Sobic003G293200 Sobic001G111600--Sobic005G128400 Sobic001G354600 Sobic001G354600 Sobic001G111600--Sobic001G354600 Sobic001G457900 Sobic001G457900 Sobic001G111600--Sobic001G457900 Sobic010G112100 Sobic010G112100 Sobic001G111600--Sobic010G112100 Sobic010G275500 Sobic010G275500 Sobic001G111600--Sobic010G275500 Sobic005G220000 Sobic005G220000 Sobic001G111600--Sobic005G220000 Sobic002G362800 Sobic002G362800 Sobic001G111600--Sobic002G362800
Octagon: transcription factors


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