Gene annotation
Transcriptome id Sobic.001G352900.1
Synonym EMB2765, Sb01g033760
Functional annotation intron-binding protein aquarius, putative, expressed
UniProt A0A1Z5S9K2
Pfam PF13087 PF13086 PF16399
Panther DB PTHR10887 PTHR10887:SF5
NCBI CDD -
KEGG Orthology K12874; intron-binding protein aquarius
Gene Ontology GO:0005681; spliceosomal complex GO:0000398mRNA splicing, via spliceosome


Orthologs (automatic annotation)
TAIR AT2G38770 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g26960.1 : intron-binding protein aquarius, putative, expressed
MaizeGDB (Corn) Zm00025a029795 , Zm00025a001009 , Zm00025a024721 , Zm00025a002704 , Zm00025a046005 , Zm00025a035964
Brachypodium KQK21461 , KQK21449
Barley HORVU4Hr1G035890.9 , HORVU4Hr1G035890.8 , HORVU4Hr1G035890.1 , HORVU4Hr1G035890.3 , HORVU4Hr1G035890.2 , HORVU4Hr1G035890.5 , HORVU4Hr1G035890.4 , HORVU4Hr1G035890.7 , HORVU4Hr1G035890.6
Wheat TraesCS4D02G155600 , TraesCS4D02G155600 , TraesCS4A02G149500 , TraesCS4A02G149500 , TraesCS4A02G149500 , TraesCS4A02G149500 , TraesCSU02G068900 , TraesCSU02G068900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
2 Sobic.002G391600 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
3 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
4 Sobic.010G001100 chromo domain containing protein, expressed -
5 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
6 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
7 Sobic.002G397500 SAC3/GANP family protein, expressed -
8 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
9 Sobic.003G293200 plus-3 domain containing protein, expressed -
10 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
11 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
12 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
13 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
14 Sobic.010G105200 SYD, putative, expressed -
15 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
16 Sobic.001G214600 expressed protein -
17 Sobic.001G004400 - K14290: XPO1, exportin-1
18 Sobic.009G256300 DNA binding protein, putative, expressed -
19 Sobic.004G023100 protein binding protein, putative, expressed -
20 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31


Gene co-expression network
sample Sobic001G352900 Sobic001G352900 Sobic010G053600 Sobic010G053600 Sobic001G352900--Sobic010G053600 Sobic002G391600 Sobic002G391600 Sobic001G352900--Sobic002G391600 Sobic004G242400 Sobic004G242400 Sobic001G352900--Sobic004G242400 Sobic010G001100 Sobic010G001100 Sobic001G352900--Sobic010G001100 Sobic009G109200 Sobic009G109200 Sobic001G352900--Sobic009G109200 Sobic002G317200 Sobic002G317200 Sobic001G352900--Sobic002G317200 Sobic002G397500 Sobic002G397500 Sobic001G352900--Sobic002G397500 Sobic001G219600 Sobic001G219600 Sobic001G352900--Sobic001G219600 Sobic003G293200 Sobic003G293200 Sobic001G352900--Sobic003G293200 Sobic010G053600--Sobic001G352900 Sobic010G053600--Sobic002G391600 Sobic010G053600--Sobic009G109200 Sobic001G004400 Sobic001G004400 Sobic010G053600--Sobic001G004400 Sobic007G171100 Sobic007G171100 Sobic010G053600--Sobic007G171100 Sobic004G260100 Sobic004G260100 Sobic010G053600--Sobic004G260100 Sobic006G036100 Sobic006G036100 Sobic010G053600--Sobic006G036100 Sobic004G248600 Sobic004G248600 Sobic010G053600--Sobic004G248600 Sobic010G053600--Sobic004G242400 Sobic002G391600--Sobic010G053600 Sobic002G391600--Sobic001G352900 Sobic008G016300 Sobic008G016300 Sobic002G391600--Sobic008G016300 Sobic002G391600--Sobic004G242400 Sobic009G256300 Sobic009G256300 Sobic002G391600--Sobic009G256300 Sobic010G105200 Sobic010G105200 Sobic002G391600--Sobic010G105200 Sobic002G391600--Sobic009G109200 Sobic010G010700 Sobic010G010700 Sobic002G391600--Sobic010G010700 Sobic002G133300 Sobic002G133300 Sobic002G391600--Sobic002G133300 Sobic007G062800 Sobic007G062800 Sobic004G242400--Sobic007G062800 Sobic004G242400--Sobic009G109200 Sobic004G242400--Sobic010G105200 Sobic004G276400 Sobic004G276400 Sobic004G242400--Sobic004G276400 Sobic004G242400--Sobic010G010700 Sobic010G112100 Sobic010G112100 Sobic004G242400--Sobic010G112100 Sobic004G314000 Sobic004G314000 Sobic004G242400--Sobic004G314000 Sobic004G242400--Sobic009G256300 Sobic001G433800 Sobic001G433800 Sobic004G242400--Sobic001G433800 Sobic010G065300 Sobic010G065300 Sobic010G001100--Sobic010G065300 Sobic004G048800 Sobic004G048800 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic010G001100--Sobic003G293200 Sobic010G001100--Sobic004G242400 Sobic010G001100--Sobic009G109200 Sobic002G154000 Sobic002G154000 Sobic010G001100--Sobic002G154000 Sobic010G001100--Sobic001G352900 Sobic010G001100--Sobic009G256300 Sobic009G109200--Sobic010G105200 Sobic009G109200--Sobic004G242400 Sobic009G109200--Sobic002G397500 Sobic001G542400 Sobic001G542400 Sobic009G109200--Sobic001G542400 Sobic001G540400 Sobic001G540400 Sobic009G109200--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic009G109200--Sobic005G008800 Sobic009G109200--Sobic004G276400 Sobic003G408600 Sobic003G408600 Sobic009G109200--Sobic003G408600 Sobic009G109200--Sobic010G112100 Sobic002G317200--Sobic004G048800 Sobic002G317200--Sobic001G219600 Sobic002G317200--Sobic004G314000 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic002G317200--Sobic004G242400 Sobic002G317200--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic002G317200--Sobic005G112300 Sobic009G260500 Sobic009G260500 Sobic002G317200--Sobic009G260500 Sobic002G397500--Sobic003G408600 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic002G397500--Sobic001G540400 Sobic002G397500--Sobic009G109200 Sobic003G072200 Sobic003G072200 Sobic002G397500--Sobic003G072200 Sobic002G397500--Sobic004G242400 Sobic002G397500--Sobic004G276400 Sobic002G397500--Sobic010G112100 Sobic001G219600--Sobic009G260500 Sobic002G309600 Sobic002G309600 Sobic001G219600--Sobic002G309600 Sobic001G219600--Sobic002G317200 Sobic009G047200 Sobic009G047200 Sobic001G219600--Sobic009G047200 Sobic003G141500 Sobic003G141500 Sobic001G219600--Sobic003G141500 Sobic010G139000 Sobic010G139000 Sobic001G219600--Sobic010G139000 Sobic001G071400 Sobic001G071400 Sobic001G219600--Sobic001G071400 Sobic001G219600--Sobic002G397500 Sobic001G020000 Sobic001G020000 Sobic001G219600--Sobic001G020000 Sobic003G293200--Sobic010G001100 Sobic009G166100 Sobic009G166100 Sobic003G293200--Sobic009G166100 Sobic005G128400 Sobic005G128400 Sobic003G293200--Sobic005G128400 Sobic004G009600 Sobic004G009600 Sobic003G293200--Sobic004G009600 Sobic003G293200--Sobic010G065300 Sobic004G264300 Sobic004G264300 Sobic003G293200--Sobic004G264300 Sobic007G031600 Sobic007G031600 Sobic003G293200--Sobic007G031600 Sobic007G117400 Sobic007G117400 Sobic003G293200--Sobic007G117400 Sobic001G111600 Sobic001G111600 Sobic003G293200--Sobic001G111600
Octagon: transcription factors


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