Gene annotation
Transcriptome id Sobic.009G166100.1,Sobic.009G166100.2
Synonym Sb09g022800
Functional annotation PWWP domain containing protein, expressed
UniProt A0A1B6P9L2 , A0A1Z5R344
Pfam PF00855
Panther DB PTHR22981 PTHR22981:SF79
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02950 : Tudor/PWWP/MBT superfamily protein
RAP-DB (Rice) LOC_Os05g38800.2 : PWWP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036039 , Zm00025a037721 , Zm00025a043920 , Zm00025a054467
Brachypodium KQK05855 , KQK05854
Barley -
Wheat TraesCS1B02G297800 , TraesCS1A02G288400 , TraesCS1A02G288400 , TraesCS1D02G287400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G293200 plus-3 domain containing protein, expressed -
2 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
3 Sobic.007G031600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.010G001100 chromo domain containing protein, expressed -
5 Sobic.001G542700 expressed protein -
6 Sobic.001G111600 expressed protein -
7 Sobic.007G117400 expressed protein -
8 Sobic.010G069100 expressed protein -
9 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
10 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
11 Sobic.001G016600 FAR1 family protein, expressed -
12 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
13 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
14 Sobic.006G052300 dnaJ domain containing protein, expressed -
15 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
16 Sobic.001G363500 DIRP family protein, putative, expressed -
17 Sobic.001G241200 protein kinase domain containing protein, expressed -
18 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
19 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -
20 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR


Gene co-expression network
sample Sobic009G166100 Sobic009G166100 Sobic003G293200 Sobic003G293200 Sobic009G166100--Sobic003G293200 Sobic004G009600 Sobic004G009600 Sobic009G166100--Sobic004G009600 Sobic007G031600 Sobic007G031600 Sobic009G166100--Sobic007G031600 Sobic010G001100 Sobic010G001100 Sobic009G166100--Sobic010G001100 Sobic001G542700 Sobic001G542700 Sobic009G166100--Sobic001G542700 Sobic001G111600 Sobic001G111600 Sobic009G166100--Sobic001G111600 Sobic007G117400 Sobic007G117400 Sobic009G166100--Sobic007G117400 Sobic010G069100 Sobic010G069100 Sobic009G166100--Sobic010G069100 Sobic010G065300 Sobic010G065300 Sobic009G166100--Sobic010G065300 Sobic003G293200--Sobic010G001100 Sobic003G293200--Sobic009G166100 Sobic005G128400 Sobic005G128400 Sobic003G293200--Sobic005G128400 Sobic003G293200--Sobic004G009600 Sobic003G293200--Sobic010G065300 Sobic004G264300 Sobic004G264300 Sobic003G293200--Sobic004G264300 Sobic003G293200--Sobic007G031600 Sobic003G293200--Sobic007G117400 Sobic003G293200--Sobic001G111600 Sobic009G040600 Sobic009G040600 Sobic004G009600--Sobic009G040600 Sobic008G028700 Sobic008G028700 Sobic004G009600--Sobic008G028700 Sobic009G260500 Sobic009G260500 Sobic004G009600--Sobic009G260500 Sobic010G279450 Sobic010G279450 Sobic004G009600--Sobic010G279450 Sobic002G309600 Sobic002G309600 Sobic004G009600--Sobic002G309600 Sobic004G009600--Sobic007G117400 Sobic004G009600--Sobic003G293200 Sobic001G363500 Sobic001G363500 Sobic004G009600--Sobic001G363500 Sobic010G277500 Sobic010G277500 Sobic004G009600--Sobic010G277500 Sobic007G031600--Sobic003G293200 Sobic007G031600--Sobic009G166100 Sobic006G210000 Sobic006G210000 Sobic007G031600--Sobic006G210000 Sobic008G100100 Sobic008G100100 Sobic007G031600--Sobic008G100100 Sobic004G156500 Sobic004G156500 Sobic007G031600--Sobic004G156500 Sobic001G170100 Sobic001G170100 Sobic007G031600--Sobic001G170100 Sobic008G131000 Sobic008G131000 Sobic007G031600--Sobic008G131000 Sobic001G352900 Sobic001G352900 Sobic007G031600--Sobic001G352900 Sobic007G031600--Sobic004G009600 Sobic010G001100--Sobic010G065300 Sobic004G048800 Sobic004G048800 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic010G001100--Sobic003G293200 Sobic004G242400 Sobic004G242400 Sobic010G001100--Sobic004G242400 Sobic009G109200 Sobic009G109200 Sobic010G001100--Sobic009G109200 Sobic002G154000 Sobic002G154000 Sobic010G001100--Sobic002G154000 Sobic010G001100--Sobic001G352900 Sobic009G256300 Sobic009G256300 Sobic010G001100--Sobic009G256300 Sobic001G542700--Sobic004G009600 Sobic001G542700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic001G542700--Sobic001G241200 Sobic002G299700 Sobic002G299700 Sobic001G542700--Sobic002G299700 Sobic001G542700--Sobic007G117400 Sobic001G542700--Sobic003G293200 Sobic001G542700--Sobic009G040600 Sobic007G061700 Sobic007G061700 Sobic001G542700--Sobic007G061700 Sobic010G209400 Sobic010G209400 Sobic001G542700--Sobic010G209400 Sobic002G068100 Sobic002G068100 Sobic001G111600--Sobic002G068100 Sobic001G111600--Sobic003G293200 Sobic001G111600--Sobic005G128400 Sobic001G354600 Sobic001G354600 Sobic001G111600--Sobic001G354600 Sobic001G457900 Sobic001G457900 Sobic001G111600--Sobic001G457900 Sobic010G112100 Sobic010G112100 Sobic001G111600--Sobic010G112100 Sobic010G275500 Sobic010G275500 Sobic001G111600--Sobic010G275500 Sobic005G220000 Sobic005G220000 Sobic001G111600--Sobic005G220000 Sobic002G362800 Sobic002G362800 Sobic001G111600--Sobic002G362800 Sobic007G117400--Sobic002G309600 Sobic007G117400--Sobic001G241200 Sobic004G065100 Sobic004G065100 Sobic007G117400--Sobic004G065100 Sobic007G161000 Sobic007G161000 Sobic007G117400--Sobic007G161000 Sobic003G280800 Sobic003G280800 Sobic007G117400--Sobic003G280800 Sobic007G117400--Sobic004G009600 Sobic001G154900 Sobic001G154900 Sobic007G117400--Sobic001G154900 Sobic007G117400--Sobic009G040600 Sobic005G008800 Sobic005G008800 Sobic007G117400--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic010G069100--Sobic002G071500 Sobic002G264200 Sobic002G264200 Sobic010G069100--Sobic002G264200 Sobic005G112300 Sobic005G112300 Sobic010G069100--Sobic005G112300 Sobic008G047800 Sobic008G047800 Sobic010G069100--Sobic008G047800 Sobic008G009700 Sobic008G009700 Sobic010G069100--Sobic008G009700 Sobic010G069100--Sobic001G154900 Sobic004G146500 Sobic004G146500 Sobic010G069100--Sobic004G146500 Sobic007G065400 Sobic007G065400 Sobic010G069100--Sobic007G065400 Sobic009G005500 Sobic009G005500 Sobic010G069100--Sobic009G005500 Sobic010G065300--Sobic010G001100 Sobic010G065300--Sobic008G009700 Sobic002G153700 Sobic002G153700 Sobic010G065300--Sobic002G153700 Sobic001G306900 Sobic001G306900 Sobic010G065300--Sobic001G306900 Sobic001G134300 Sobic001G134300 Sobic010G065300--Sobic001G134300 Sobic010G065300--Sobic003G293200 Sobic009G119000 Sobic009G119000 Sobic010G065300--Sobic009G119000 Sobic010G065300--Sobic004G156500 Sobic010G065300--Sobic004G048800
Octagon: transcription factors


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