Gene annotation
Transcriptome id Sobic.006G052300.2,Sobic.006G052300.1
Synonym Sb06g013910
Functional annotation dnaJ domain containing protein, expressed
UniProt A0A1Z5RCC7 , C5YET3
Pfam PF00226 PF11926
Panther DB PTHR24078 PTHR24078:SF212
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53150 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os04g31940.1 : dnaJ domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011752 , Zm00025a055905 , Zm00025a031355
Brachypodium KQJ82282 , KQJ82283
Barley HORVU2Hr1G070040.7 , HORVU2Hr1G070040.6 , HORVU2Hr1G070040.3 , HORVU2Hr1G070040.2 , HORVU2Hr1G070040.1 , HORVU2Hr1G070040.10 , HORVU2Hr1G070040.5 , HORVU2Hr1G070040.4 , HORVU2Hr1G070040.9 , HORVU2Hr1G070040.8
Wheat TraesCS2B02G301100 , TraesCS4B02G319100 , TraesCS2D02G283100 , TraesCS2A02G284200
Populus -


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cDNA sequences
Sobic.006G052300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G264300 nuclear matrix constituent protein 1-like, putative, expressed -
2 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
3 Sobic.006G220000 bromodomain containing protein, expressed -
4 Sobic.007G054400 FAR1 family protein, expressed -
5 Sobic.004G096500 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
6 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
7 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
8 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
9 Sobic.010G277500 expressed protein -
10 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
11 Sobic.004G039200 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
12 Sobic.006G032400 expressed protein -
13 Sobic.003G293200 plus-3 domain containing protein, expressed -
14 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
15 Sobic.001G303675 - -
16 Sobic.009G166100 PWWP domain containing protein, expressed -
17 Sobic.008G063000 transcriptional corepressor SEUSS, putative, expressed -
18 Sobic.001G083400 expressed protein -
19 Sobic.002G144933 - -
20 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4


Gene co-expression network
sample Sobic006G052300 Sobic006G052300 Sobic004G264300 Sobic004G264300 Sobic006G052300--Sobic004G264300 Sobic004G009600 Sobic004G009600 Sobic006G052300--Sobic004G009600 Sobic006G220000 Sobic006G220000 Sobic006G052300--Sobic006G220000 Sobic007G054400 Sobic007G054400 Sobic006G052300--Sobic007G054400 Sobic004G096500 Sobic004G096500 Sobic006G052300--Sobic004G096500 Sobic006G210000 Sobic006G210000 Sobic006G052300--Sobic006G210000 Sobic004G145500 Sobic004G145500 Sobic006G052300--Sobic004G145500 Sobic008G100100 Sobic008G100100 Sobic006G052300--Sobic008G100100 Sobic010G277500 Sobic010G277500 Sobic006G052300--Sobic010G277500 Sobic003G293200 Sobic003G293200 Sobic004G264300--Sobic003G293200 Sobic004G039200 Sobic004G039200 Sobic004G264300--Sobic004G039200 Sobic007G117400 Sobic007G117400 Sobic004G264300--Sobic007G117400 Sobic004G264300--Sobic006G052300 Sobic004G264300--Sobic004G145500 Sobic004G264300--Sobic007G054400 Sobic009G024000 Sobic009G024000 Sobic004G264300--Sobic009G024000 Sobic004G264300--Sobic004G009600 Sobic001G124000 Sobic001G124000 Sobic004G264300--Sobic001G124000 Sobic009G040600 Sobic009G040600 Sobic004G009600--Sobic009G040600 Sobic008G028700 Sobic008G028700 Sobic004G009600--Sobic008G028700 Sobic009G260500 Sobic009G260500 Sobic004G009600--Sobic009G260500 Sobic010G279450 Sobic010G279450 Sobic004G009600--Sobic010G279450 Sobic002G309600 Sobic002G309600 Sobic004G009600--Sobic002G309600 Sobic004G009600--Sobic007G117400 Sobic004G009600--Sobic003G293200 Sobic001G363500 Sobic001G363500 Sobic004G009600--Sobic001G363500 Sobic004G009600--Sobic010G277500 Sobic006G220000--Sobic006G052300 Sobic006G220000--Sobic004G039200 Sobic006G220000--Sobic004G264300 Sobic009G065100 Sobic009G065100 Sobic006G220000--Sobic009G065100 Sobic007G161000 Sobic007G161000 Sobic006G220000--Sobic007G161000 Sobic006G274600 Sobic006G274600 Sobic006G220000--Sobic006G274600 Sobic002G151600 Sobic002G151600 Sobic006G220000--Sobic002G151600 Sobic008G011100 Sobic008G011100 Sobic006G220000--Sobic008G011100 Sobic006G220000--Sobic007G117400 Sobic001G253200 Sobic001G253200 Sobic007G054400--Sobic001G253200 Sobic007G054400--Sobic004G039200 Sobic003G101500 Sobic003G101500 Sobic007G054400--Sobic003G101500 Sobic007G054400--Sobic004G145500 Sobic003G197800 Sobic003G197800 Sobic007G054400--Sobic003G197800 Sobic004G258700 Sobic004G258700 Sobic007G054400--Sobic004G258700 Sobic001G433300 Sobic001G433300 Sobic007G054400--Sobic001G433300 Sobic007G054400--Sobic009G065100 Sobic007G054400--Sobic006G052300 Sobic007G011600 Sobic007G011600 Sobic004G096500--Sobic007G011600 Sobic001G303675 Sobic001G303675 Sobic004G096500--Sobic001G303675 Sobic006G222300 Sobic006G222300 Sobic004G096500--Sobic006G222300 Sobic004G096500--Sobic006G052300 Sobic004G096500--Sobic008G011100 Sobic002G259800 Sobic002G259800 Sobic004G096500--Sobic002G259800 Sobic001G306900 Sobic001G306900 Sobic004G096500--Sobic001G306900 Sobic005G079800 Sobic005G079800 Sobic004G096500--Sobic005G079800 Sobic001G261496 Sobic001G261496 Sobic004G096500--Sobic001G261496 Sobic010G001100 Sobic010G001100 Sobic006G210000--Sobic010G001100 Sobic006G210000--Sobic003G293200 Sobic004G156500 Sobic004G156500 Sobic006G210000--Sobic004G156500 Sobic010G065300 Sobic010G065300 Sobic006G210000--Sobic010G065300 Sobic004G355800 Sobic004G355800 Sobic006G210000--Sobic004G355800 Sobic007G031600 Sobic007G031600 Sobic006G210000--Sobic007G031600 Sobic006G210000--Sobic008G100100 Sobic006G210000--Sobic006G052300 Sobic005G191900 Sobic005G191900 Sobic006G210000--Sobic005G191900 Sobic007G065400 Sobic007G065400 Sobic004G145500--Sobic007G065400 Sobic008G173900 Sobic008G173900 Sobic004G145500--Sobic008G173900 Sobic002G144933 Sobic002G144933 Sobic004G145500--Sobic002G144933 Sobic008G009700 Sobic008G009700 Sobic004G145500--Sobic008G009700 Sobic004G145500--Sobic001G306900 Sobic003G200200 Sobic003G200200 Sobic004G145500--Sobic003G200200 Sobic009G210500 Sobic009G210500 Sobic004G145500--Sobic009G210500 Sobic010G136600 Sobic010G136600 Sobic004G145500--Sobic010G136600 Sobic001G241200 Sobic001G241200 Sobic004G145500--Sobic001G241200 Sobic008G100100--Sobic004G156500 Sobic008G100100--Sobic001G306900 Sobic006G032400 Sobic006G032400 Sobic008G100100--Sobic006G032400 Sobic005G015900 Sobic005G015900 Sobic008G100100--Sobic005G015900 Sobic008G100100--Sobic006G210000 Sobic008G100100--Sobic007G031600 Sobic008G100100--Sobic010G065300 Sobic003G241200 Sobic003G241200 Sobic008G100100--Sobic003G241200 Sobic010G096000 Sobic010G096000 Sobic008G100100--Sobic010G096000 Sobic004G208900 Sobic004G208900 Sobic010G277500--Sobic004G208900 Sobic006G209850 Sobic006G209850 Sobic010G277500--Sobic006G209850 Sobic010G277500--Sobic007G065400 Sobic010G277500--Sobic009G260500 Sobic003G280800 Sobic003G280800 Sobic010G277500--Sobic003G280800 Sobic010G277500--Sobic004G009600 Sobic010G277500--Sobic008G028700 Sobic010G277500--Sobic004G258700 Sobic006G216800 Sobic006G216800 Sobic010G277500--Sobic006G216800
Octagon: transcription factors


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