Gene annotation
Transcriptome id Sobic.001G083400.1,Sobic.001G083400.4,Sobic.001G083400.3,Sobic.001G083400.2
Synonym Sb01g007520
Functional annotation expressed protein
UniProt A0A1B6QHZ3 , A0A1B6QHX3
Pfam PF05904
Panther DB PTHR33167 PTHR33167:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13940 : Plant protein of unknown function (DUF863)
RAP-DB (Rice) LOC_Os03g55130.2 : expressed protein
MaizeGDB (Corn) Zm00025a008232 , Zm00025a016766
Brachypodium KQK13092 , KQK13093 , PNT74106
Barley HORVU0Hr1G030810.1 , HORVU0Hr1G027660.2 , HORVU5Hr1G096790.1
Wheat TraesCS5D02G405900 , TraesCS5D02G405900 , TraesCS5A02G396400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
2 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
3 Sobic.009G210500 expressed protein -
4 Sobic.010G277500 expressed protein -
5 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
6 Sobic.008G113100 protein binding protein, putative, expressed -
7 Sobic.010G069100 expressed protein -
8 Sobic.007G117400 expressed protein -
9 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
10 Sobic.003G184699 - -
11 Sobic.001G204000 expressed protein -
12 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
13 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
14 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
15 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
16 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
17 Sobic.001G363500 DIRP family protein, putative, expressed -
18 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
19 Sobic.001G407200 SacI homology domain containing protein, expressed -
20 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2


Gene co-expression network
sample Sobic001G083400 Sobic001G083400 Sobic007G065400 Sobic007G065400 Sobic001G083400--Sobic007G065400 Sobic002G309600 Sobic002G309600 Sobic001G083400--Sobic002G309600 Sobic009G210500 Sobic009G210500 Sobic001G083400--Sobic009G210500 Sobic010G277500 Sobic010G277500 Sobic001G083400--Sobic010G277500 Sobic001G026200 Sobic001G026200 Sobic001G083400--Sobic001G026200 Sobic008G113100 Sobic008G113100 Sobic001G083400--Sobic008G113100 Sobic010G069100 Sobic010G069100 Sobic001G083400--Sobic010G069100 Sobic007G117400 Sobic007G117400 Sobic001G083400--Sobic007G117400 Sobic009G040600 Sobic009G040600 Sobic001G083400--Sobic009G040600 Sobic002G006900 Sobic002G006900 Sobic007G065400--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic007G065400--Sobic002G191800 Sobic008G009700 Sobic008G009700 Sobic007G065400--Sobic008G009700 Sobic007G065400--Sobic009G040600 Sobic004G145500 Sobic004G145500 Sobic007G065400--Sobic004G145500 Sobic007G065400--Sobic009G210500 Sobic003G119000 Sobic003G119000 Sobic007G065400--Sobic003G119000 Sobic003G372700 Sobic003G372700 Sobic007G065400--Sobic003G372700 Sobic008G028700 Sobic008G028700 Sobic007G065400--Sobic008G028700 Sobic003G280800 Sobic003G280800 Sobic002G309600--Sobic003G280800 Sobic002G134200 Sobic002G134200 Sobic002G309600--Sobic002G134200 Sobic002G309600--Sobic007G117400 Sobic002G309600--Sobic008G009700 Sobic001G071400 Sobic001G071400 Sobic002G309600--Sobic001G071400 Sobic005G112300 Sobic005G112300 Sobic002G309600--Sobic005G112300 Sobic004G065100 Sobic004G065100 Sobic002G309600--Sobic004G065100 Sobic001G154900 Sobic001G154900 Sobic002G309600--Sobic001G154900 Sobic002G309600--Sobic002G006900 Sobic002G320500 Sobic002G320500 Sobic009G210500--Sobic002G320500 Sobic009G210500--Sobic007G065400 Sobic002G157000 Sobic002G157000 Sobic009G210500--Sobic002G157000 Sobic006G032400 Sobic006G032400 Sobic009G210500--Sobic006G032400 Sobic003G268300 Sobic003G268300 Sobic009G210500--Sobic003G268300 Sobic001G407200 Sobic001G407200 Sobic009G210500--Sobic001G407200 Sobic007G167500 Sobic007G167500 Sobic009G210500--Sobic007G167500 Sobic001G090400 Sobic001G090400 Sobic009G210500--Sobic001G090400 Sobic009G210500--Sobic004G145500 Sobic004G208900 Sobic004G208900 Sobic010G277500--Sobic004G208900 Sobic006G209850 Sobic006G209850 Sobic010G277500--Sobic006G209850 Sobic010G277500--Sobic007G065400 Sobic009G260500 Sobic009G260500 Sobic010G277500--Sobic009G260500 Sobic010G277500--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic010G277500--Sobic004G009600 Sobic010G277500--Sobic008G028700 Sobic004G258700 Sobic004G258700 Sobic010G277500--Sobic004G258700 Sobic006G216800 Sobic006G216800 Sobic010G277500--Sobic006G216800 Sobic002G071500 Sobic002G071500 Sobic001G026200--Sobic002G071500 Sobic010G116600 Sobic010G116600 Sobic001G026200--Sobic010G116600 Sobic002G153700 Sobic002G153700 Sobic001G026200--Sobic002G153700 Sobic010G236400 Sobic010G236400 Sobic001G026200--Sobic010G236400 Sobic003G360400 Sobic003G360400 Sobic001G026200--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic001G026200--Sobic009G119000 Sobic001G398800 Sobic001G398800 Sobic001G026200--Sobic001G398800 Sobic001G026200--Sobic003G119000 Sobic009G044800 Sobic009G044800 Sobic001G026200--Sobic009G044800 Sobic008G113100--Sobic004G258700 Sobic008G113100--Sobic008G028700 Sobic005G064000 Sobic005G064000 Sobic008G113100--Sobic005G064000 Sobic008G113100--Sobic007G065400 Sobic001G456900 Sobic001G456900 Sobic008G113100--Sobic001G456900 Sobic009G024000 Sobic009G024000 Sobic008G113100--Sobic009G024000 Sobic008G113100--Sobic009G040600 Sobic008G113100--Sobic004G208900 Sobic004G039200 Sobic004G039200 Sobic008G113100--Sobic004G039200 Sobic010G069100--Sobic002G071500 Sobic002G264200 Sobic002G264200 Sobic010G069100--Sobic002G264200 Sobic010G069100--Sobic005G112300 Sobic008G047800 Sobic008G047800 Sobic010G069100--Sobic008G047800 Sobic010G069100--Sobic008G009700 Sobic010G069100--Sobic001G154900 Sobic004G146500 Sobic004G146500 Sobic010G069100--Sobic004G146500 Sobic010G069100--Sobic007G065400 Sobic009G005500 Sobic009G005500 Sobic010G069100--Sobic009G005500 Sobic007G117400--Sobic002G309600 Sobic001G241200 Sobic001G241200 Sobic007G117400--Sobic001G241200 Sobic007G117400--Sobic004G065100 Sobic007G161000 Sobic007G161000 Sobic007G117400--Sobic007G161000 Sobic007G117400--Sobic003G280800 Sobic007G117400--Sobic004G009600 Sobic007G117400--Sobic001G154900 Sobic007G117400--Sobic009G040600 Sobic005G008800 Sobic005G008800 Sobic007G117400--Sobic005G008800 Sobic009G040600--Sobic004G009600 Sobic009G040600--Sobic002G006900 Sobic009G040600--Sobic008G047800 Sobic009G040600--Sobic004G208900 Sobic009G040600--Sobic005G112300 Sobic009G040600--Sobic007G065400 Sobic009G040600--Sobic008G028700 Sobic009G040600--Sobic002G309600 Sobic009G126400 Sobic009G126400 Sobic009G040600--Sobic009G126400
Octagon: transcription factors


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