Gene annotation
Transcriptome id Sobic.001G204000.2,Sobic.001G204000.1
Synonym Sb01g018020
Functional annotation expressed protein
UniProt C5WWG6
Pfam -
Panther DB PTHR35497
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28260 : -
RAP-DB (Rice) LOC_Os10g35710.1 : expressed protein
MaizeGDB (Corn) Zm00025a006442 , Zm00025a006435
Brachypodium KQJ97320 , KQJ97319
Barley HORVU1Hr1G045160.3 , HORVU1Hr1G045160.2 , HORVU1Hr1G045160.1 , HORVU1Hr1G045160.4
Wheat TraesCS1D02G167000 , TraesCS1D02G167000 , TraesCS1D02G167000 , TraesCS1B02G187900 , TraesCS1A02G169000
Populus -


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cDNA sequences
Sobic.001G204000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G083400 expressed protein -
2 Sobic.010G010700 PHD-finger family protein, expressed -
3 Sobic.001G365900 PWWP domain containing protein, expressed -
4 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
5 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
6 Sobic.005G014300 expressed protein -
7 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
8 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
9 Sobic.001G289600 BAH domain containing protein, putative, expressed -
10 Sobic.009G191000 MATH domain containing protein, expressed -
11 Sobic.010G277500 expressed protein -
12 Sobic.008G113100 protein binding protein, putative, expressed -
13 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
14 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
15 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
16 Sobic.004G258700 PHD-finger family protein, expressed -
17 Sobic.001G214300 expressed protein -
18 Sobic.007G117400 expressed protein -
19 Sobic.001G318432 - -
20 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5


Gene co-expression network
sample Sobic001G204000 Sobic001G204000 Sobic001G083400 Sobic001G083400 Sobic001G204000--Sobic001G083400 Sobic010G010700 Sobic010G010700 Sobic001G204000--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic001G204000--Sobic001G365900 Sobic002G134200 Sobic002G134200 Sobic001G204000--Sobic002G134200 Sobic002G133400 Sobic002G133400 Sobic001G204000--Sobic002G133400 Sobic005G014300 Sobic005G014300 Sobic001G204000--Sobic005G014300 Sobic003G389200 Sobic003G389200 Sobic001G204000--Sobic003G389200 Sobic002G309600 Sobic002G309600 Sobic001G204000--Sobic002G309600 Sobic001G289600 Sobic001G289600 Sobic001G204000--Sobic001G289600 Sobic007G065400 Sobic007G065400 Sobic001G083400--Sobic007G065400 Sobic001G083400--Sobic002G309600 Sobic009G210500 Sobic009G210500 Sobic001G083400--Sobic009G210500 Sobic010G277500 Sobic010G277500 Sobic001G083400--Sobic010G277500 Sobic001G026200 Sobic001G026200 Sobic001G083400--Sobic001G026200 Sobic008G113100 Sobic008G113100 Sobic001G083400--Sobic008G113100 Sobic010G069100 Sobic010G069100 Sobic001G083400--Sobic010G069100 Sobic007G117400 Sobic007G117400 Sobic001G083400--Sobic007G117400 Sobic009G040600 Sobic009G040600 Sobic001G083400--Sobic009G040600 Sobic010G206900 Sobic010G206900 Sobic010G010700--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic010G010700--Sobic004G034900 Sobic004G276400 Sobic004G276400 Sobic010G010700--Sobic004G276400 Sobic001G194200 Sobic001G194200 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic008G001200 Sobic008G001200 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic001G071400 Sobic001G071400 Sobic002G134200--Sobic001G071400 Sobic002G134200--Sobic002G309600 Sobic003G280800 Sobic003G280800 Sobic002G134200--Sobic003G280800 Sobic006G216800 Sobic006G216800 Sobic002G134200--Sobic006G216800 Sobic002G134200--Sobic002G133400 Sobic008G047800 Sobic008G047800 Sobic002G134200--Sobic008G047800 Sobic005G008800 Sobic005G008800 Sobic002G134200--Sobic005G008800 Sobic002G134200--Sobic009G191000 Sobic002G134200--Sobic002G008900 Sobic002G133400--Sobic006G216800 Sobic002G133400--Sobic002G134200 Sobic002G006900 Sobic002G006900 Sobic002G133400--Sobic002G006900 Sobic002G133400--Sobic008G047800 Sobic002G133400--Sobic007G065400 Sobic002G133400--Sobic002G309600 Sobic010G139000 Sobic010G139000 Sobic002G133400--Sobic010G139000 Sobic001G036050 Sobic001G036050 Sobic002G133400--Sobic001G036050 Sobic006G048500 Sobic006G048500 Sobic002G133400--Sobic006G048500 Sobic005G014300--Sobic001G204000 Sobic005G014300--Sobic002G133400 Sobic001G374100 Sobic001G374100 Sobic005G014300--Sobic001G374100 Sobic001G456900 Sobic001G456900 Sobic005G014300--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic005G014300--Sobic008G044100 Sobic007G161000 Sobic007G161000 Sobic005G014300--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic005G014300--Sobic009G024000 Sobic005G014300--Sobic002G134200 Sobic007G136800 Sobic007G136800 Sobic005G014300--Sobic007G136800 Sobic009G256300 Sobic009G256300 Sobic003G389200--Sobic009G256300 Sobic003G389200--Sobic010G206900 Sobic003G360400 Sobic003G360400 Sobic003G389200--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic003G389200--Sobic010G112100 Sobic003G389200--Sobic010G010700 Sobic003G389200--Sobic001G365900 Sobic003G389200--Sobic001G540400 Sobic007G105100 Sobic007G105100 Sobic003G389200--Sobic007G105100 Sobic001G230000 Sobic001G230000 Sobic003G389200--Sobic001G230000 Sobic002G309600--Sobic003G280800 Sobic002G309600--Sobic002G134200 Sobic002G309600--Sobic007G117400 Sobic008G009700 Sobic008G009700 Sobic002G309600--Sobic008G009700 Sobic002G309600--Sobic001G071400 Sobic002G309600--Sobic005G112300 Sobic004G065100 Sobic004G065100 Sobic002G309600--Sobic004G065100 Sobic001G154900 Sobic001G154900 Sobic002G309600--Sobic001G154900 Sobic002G309600--Sobic002G006900 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic001G289600--Sobic001G289800 Sobic003G422500 Sobic003G422500 Sobic001G289600--Sobic003G422500 Sobic001G289600--Sobic001G365900 Sobic001G289600--Sobic009G191000 Sobic001G289600--Sobic005G008800 Sobic001G289600--Sobic007G105100 Sobic001G289600--Sobic010G010700
Octagon: transcription factors


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