Gene annotation
Transcriptome id Sobic.005G014300.2,Sobic.005G014300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PPM1
Pfam PF11331
Panther DB PTHR31105 PTHR31105:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05190 : Protein of unknown function (DUF3133)
RAP-DB (Rice) LOC_Os12g02490.1 : expressed protein
MaizeGDB (Corn) Zm00025a033316
Brachypodium KQJ89440 , KQJ89420
Barley HORVU4Hr1G023030.1 , HORVU4Hr1G023030.2
Wheat TraesCS4A02G193400 , TraesCS4B02G121700 , TraesCS4A02G193400 , TraesCS4D02G119800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G204000 expressed protein -
2 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
3 Sobic.001G374100 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
4 Sobic.001G456900 expressed protein -
5 Sobic.008G044100 expressed protein -
6 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
7 Sobic.009G024000 nuclear factor related to kappa-B-binding protein, related, putative, expressed K11671: NFRKB, nuclear factor related to kappa-B-binding protein
8 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
9 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
10 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
11 Sobic.008G113100 protein binding protein, putative, expressed -
12 Sobic.002G121600 myb-like DNA-binding domain containing protein, expressed -
13 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
14 Sobic.003G101500 dnaJ domain containing protein, expressed -
15 Sobic.010G032900 transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
16 Sobic.007G117400 expressed protein -
17 Sobic.004G258700 PHD-finger family protein, expressed -
18 Sobic.010G126000 WD-40 repeat family protein, putative, expressed -
19 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
20 Sobic.001G365900 PWWP domain containing protein, expressed -


Gene co-expression network
sample Sobic005G014300 Sobic005G014300 Sobic001G204000 Sobic001G204000 Sobic005G014300--Sobic001G204000 Sobic002G133400 Sobic002G133400 Sobic005G014300--Sobic002G133400 Sobic001G374100 Sobic001G374100 Sobic005G014300--Sobic001G374100 Sobic001G456900 Sobic001G456900 Sobic005G014300--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic005G014300--Sobic008G044100 Sobic007G161000 Sobic007G161000 Sobic005G014300--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic005G014300--Sobic009G024000 Sobic002G134200 Sobic002G134200 Sobic005G014300--Sobic002G134200 Sobic007G136800 Sobic007G136800 Sobic005G014300--Sobic007G136800 Sobic001G083400 Sobic001G083400 Sobic001G204000--Sobic001G083400 Sobic010G010700 Sobic010G010700 Sobic001G204000--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic001G204000--Sobic001G365900 Sobic001G204000--Sobic002G134200 Sobic001G204000--Sobic002G133400 Sobic001G204000--Sobic005G014300 Sobic003G389200 Sobic003G389200 Sobic001G204000--Sobic003G389200 Sobic002G309600 Sobic002G309600 Sobic001G204000--Sobic002G309600 Sobic001G289600 Sobic001G289600 Sobic001G204000--Sobic001G289600 Sobic006G216800 Sobic006G216800 Sobic002G133400--Sobic006G216800 Sobic002G133400--Sobic002G134200 Sobic002G006900 Sobic002G006900 Sobic002G133400--Sobic002G006900 Sobic008G047800 Sobic008G047800 Sobic002G133400--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G133400--Sobic007G065400 Sobic002G133400--Sobic002G309600 Sobic010G139000 Sobic010G139000 Sobic002G133400--Sobic010G139000 Sobic001G036050 Sobic001G036050 Sobic002G133400--Sobic001G036050 Sobic006G048500 Sobic006G048500 Sobic002G133400--Sobic006G048500 Sobic001G374100--Sobic008G044100 Sobic004G134200 Sobic004G134200 Sobic001G374100--Sobic004G134200 Sobic001G374100--Sobic010G010700 Sobic003G155100 Sobic003G155100 Sobic001G374100--Sobic003G155100 Sobic006G252900 Sobic006G252900 Sobic001G374100--Sobic006G252900 Sobic003G011300 Sobic003G011300 Sobic001G374100--Sobic003G011300 Sobic008G001200 Sobic008G001200 Sobic001G374100--Sobic008G001200 Sobic006G259800 Sobic006G259800 Sobic001G374100--Sobic006G259800 Sobic001G374100--Sobic001G456900 Sobic001G456900--Sobic001G036050 Sobic001G456900--Sobic010G139000 Sobic004G258700 Sobic004G258700 Sobic001G456900--Sobic004G258700 Sobic008G113100 Sobic008G113100 Sobic001G456900--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic001G456900--Sobic008G028700 Sobic002G180666 Sobic002G180666 Sobic001G456900--Sobic002G180666 Sobic001G311500 Sobic001G311500 Sobic001G456900--Sobic001G311500 Sobic003G398700 Sobic003G398700 Sobic001G456900--Sobic003G398700 Sobic003G101500 Sobic003G101500 Sobic001G456900--Sobic003G101500 Sobic008G044100--Sobic010G010700 Sobic008G044100--Sobic004G134200 Sobic008G044100--Sobic001G374100 Sobic008G044100--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G044100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic008G044100--Sobic001G230000 Sobic008G044100--Sobic008G001200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600 Sobic004G039200 Sobic004G039200 Sobic007G161000--Sobic004G039200 Sobic007G117400 Sobic007G117400 Sobic007G161000--Sobic007G117400 Sobic007G161000--Sobic009G024000 Sobic007G161000--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic007G161000--Sobic006G182900 Sobic007G161000--Sobic002G309600 Sobic004G314000 Sobic004G314000 Sobic007G161000--Sobic004G314000 Sobic007G161000--Sobic002G134200 Sobic007G161000--Sobic008G028700 Sobic009G024000--Sobic004G039200 Sobic009G024000--Sobic007G161000 Sobic009G024000--Sobic008G028700 Sobic009G024000--Sobic008G113100 Sobic009G024000--Sobic007G117400 Sobic009G040600 Sobic009G040600 Sobic009G024000--Sobic009G040600 Sobic004G009600 Sobic004G009600 Sobic009G024000--Sobic004G009600 Sobic009G024000--Sobic002G309600 Sobic009G024000--Sobic003G101500 Sobic001G071400 Sobic001G071400 Sobic002G134200--Sobic001G071400 Sobic002G134200--Sobic002G309600 Sobic003G280800 Sobic003G280800 Sobic002G134200--Sobic003G280800 Sobic002G134200--Sobic006G216800 Sobic002G134200--Sobic002G133400 Sobic002G134200--Sobic008G047800 Sobic005G008800 Sobic005G008800 Sobic002G134200--Sobic005G008800 Sobic009G191000 Sobic009G191000 Sobic002G134200--Sobic009G191000 Sobic002G008900 Sobic002G008900 Sobic002G134200--Sobic002G008900 Sobic007G136800--Sobic003G398700 Sobic010G126000 Sobic010G126000 Sobic007G136800--Sobic010G126000 Sobic003G168100 Sobic003G168100 Sobic007G136800--Sobic003G168100 Sobic001G375700 Sobic001G375700 Sobic007G136800--Sobic001G375700 Sobic006G031800 Sobic006G031800 Sobic007G136800--Sobic006G031800 Sobic005G100600 Sobic005G100600 Sobic007G136800--Sobic005G100600 Sobic001G043800 Sobic001G043800 Sobic007G136800--Sobic001G043800 Sobic007G136800--Sobic003G011300 Sobic010G032900 Sobic010G032900 Sobic007G136800--Sobic010G032900
Octagon: transcription factors


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