Gene annotation
Transcriptome id Sobic.006G220000.4,Sobic.006G220000.3
Synonym GTE7, Sb06g028960
Functional annotation bromodomain containing protein, expressed
UniProt A0A1Z5RF90 , A0A1Z5RG84
Pfam PF00439 PF17035
Panther DB PTHR22880 PTHR22880:SF162
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G65630 : global transcription factor group E7
RAP-DB (Rice) LOC_Os04g53170.1 : bromodomain containing protein, expressed
MaizeGDB (Corn) Zm00025a009723 , Zm00025a057053
Brachypodium KQJ95056
Barley -
Wheat TraesCS2D02G466700 , TraesCS2D02G466700 , TraesCS2D02G466700
Populus -


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cDNA sequences
Sobic.006G220000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G052300 dnaJ domain containing protein, expressed -
2 Sobic.004G039200 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
3 Sobic.004G264300 nuclear matrix constituent protein 1-like, putative, expressed -
4 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
5 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
6 Sobic.006G274600 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
7 Sobic.002G151600 R-interacting factor 1, putative, expressed -
8 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
9 Sobic.007G117400 expressed protein -
10 Sobic.002G248400 ENT domain containing protein, expressed -
11 Sobic.003G359600 OsFBL4 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
12 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
13 Sobic.001G274200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
14 Sobic.002G320500 MYB family transcription factor, putative, expressed -
15 Sobic.001G253200 mandelonitrile lyase, putative, expressed -
16 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
17 Sobic.009G138800 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
18 Sobic.009G005500 expressed protein -
19 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
20 Sobic.007G000100 PWWP domain containing protein, expressed -


Gene co-expression network
sample Sobic006G220000 Sobic006G220000 Sobic006G052300 Sobic006G052300 Sobic006G220000--Sobic006G052300 Sobic004G039200 Sobic004G039200 Sobic006G220000--Sobic004G039200 Sobic004G264300 Sobic004G264300 Sobic006G220000--Sobic004G264300 Sobic009G065100 Sobic009G065100 Sobic006G220000--Sobic009G065100 Sobic007G161000 Sobic007G161000 Sobic006G220000--Sobic007G161000 Sobic006G274600 Sobic006G274600 Sobic006G220000--Sobic006G274600 Sobic002G151600 Sobic002G151600 Sobic006G220000--Sobic002G151600 Sobic008G011100 Sobic008G011100 Sobic006G220000--Sobic008G011100 Sobic007G117400 Sobic007G117400 Sobic006G220000--Sobic007G117400 Sobic006G052300--Sobic004G264300 Sobic004G009600 Sobic004G009600 Sobic006G052300--Sobic004G009600 Sobic006G052300--Sobic006G220000 Sobic007G054400 Sobic007G054400 Sobic006G052300--Sobic007G054400 Sobic004G096500 Sobic004G096500 Sobic006G052300--Sobic004G096500 Sobic006G210000 Sobic006G210000 Sobic006G052300--Sobic006G210000 Sobic004G145500 Sobic004G145500 Sobic006G052300--Sobic004G145500 Sobic008G100100 Sobic008G100100 Sobic006G052300--Sobic008G100100 Sobic010G277500 Sobic010G277500 Sobic006G052300--Sobic010G277500 Sobic009G024000 Sobic009G024000 Sobic004G039200--Sobic009G024000 Sobic003G101500 Sobic003G101500 Sobic004G039200--Sobic003G101500 Sobic004G039200--Sobic007G161000 Sobic007G065400 Sobic007G065400 Sobic004G039200--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic004G039200--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G039200--Sobic008G028700 Sobic008G009700 Sobic008G009700 Sobic004G039200--Sobic008G009700 Sobic004G039200--Sobic007G117400 Sobic004G039200--Sobic007G054400 Sobic003G293200 Sobic003G293200 Sobic004G264300--Sobic003G293200 Sobic004G264300--Sobic004G039200 Sobic004G264300--Sobic007G117400 Sobic004G264300--Sobic006G052300 Sobic004G264300--Sobic004G145500 Sobic004G264300--Sobic007G054400 Sobic004G264300--Sobic009G024000 Sobic004G264300--Sobic004G009600 Sobic001G124000 Sobic001G124000 Sobic004G264300--Sobic001G124000 Sobic002G320500 Sobic002G320500 Sobic009G065100--Sobic002G320500 Sobic002G157000 Sobic002G157000 Sobic009G065100--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic009G065100--Sobic008G173900 Sobic009G215800 Sobic009G215800 Sobic009G065100--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic001G107500 Sobic001G107500 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic007G161000--Sobic004G039200 Sobic007G161000--Sobic007G117400 Sobic007G161000--Sobic009G024000 Sobic010G139000 Sobic010G139000 Sobic007G161000--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic007G161000--Sobic006G182900 Sobic002G309600 Sobic002G309600 Sobic007G161000--Sobic002G309600 Sobic004G314000 Sobic004G314000 Sobic007G161000--Sobic004G314000 Sobic002G134200 Sobic002G134200 Sobic007G161000--Sobic002G134200 Sobic007G161000--Sobic008G028700 Sobic008G067600 Sobic008G067600 Sobic006G274600--Sobic008G067600 Sobic006G274600--Sobic009G065100 Sobic004G164400 Sobic004G164400 Sobic006G274600--Sobic004G164400 Sobic010G255700 Sobic010G255700 Sobic006G274600--Sobic010G255700 Sobic006G274600--Sobic004G039200 Sobic006G274600--Sobic004G084300 Sobic006G274600--Sobic007G161000 Sobic006G105400 Sobic006G105400 Sobic006G274600--Sobic006G105400 Sobic006G274600--Sobic002G320500 Sobic002G151600--Sobic002G157000 Sobic002G151600--Sobic003G197800 Sobic002G151600--Sobic002G320500 Sobic002G313300 Sobic002G313300 Sobic002G151600--Sobic002G313300 Sobic009G000500 Sobic009G000500 Sobic002G151600--Sobic009G000500 Sobic001G094000 Sobic001G094000 Sobic002G151600--Sobic001G094000 Sobic002G151600--Sobic009G065100 Sobic002G248400 Sobic002G248400 Sobic002G151600--Sobic002G248400 Sobic001G303675 Sobic001G303675 Sobic002G151600--Sobic001G303675 Sobic001G219600 Sobic001G219600 Sobic008G011100--Sobic001G219600 Sobic008G011100--Sobic004G039200 Sobic004G087600 Sobic004G087600 Sobic008G011100--Sobic004G087600 Sobic002G031400 Sobic002G031400 Sobic008G011100--Sobic002G031400 Sobic009G260500 Sobic009G260500 Sobic008G011100--Sobic009G260500 Sobic004G018300 Sobic004G018300 Sobic008G011100--Sobic004G018300 Sobic001G167200 Sobic001G167200 Sobic008G011100--Sobic001G167200 Sobic008G011100--Sobic009G065100 Sobic001G311500 Sobic001G311500 Sobic008G011100--Sobic001G311500 Sobic007G117400--Sobic002G309600 Sobic001G241200 Sobic001G241200 Sobic007G117400--Sobic001G241200 Sobic004G065100 Sobic004G065100 Sobic007G117400--Sobic004G065100 Sobic007G117400--Sobic007G161000 Sobic003G280800 Sobic003G280800 Sobic007G117400--Sobic003G280800 Sobic007G117400--Sobic004G009600 Sobic001G154900 Sobic001G154900 Sobic007G117400--Sobic001G154900 Sobic009G040600 Sobic009G040600 Sobic007G117400--Sobic009G040600 Sobic005G008800 Sobic005G008800 Sobic007G117400--Sobic005G008800
Octagon: transcription factors


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