Gene annotation
Transcriptome id Sobic.001G253200.1
Synonym Sb01g022360
Functional annotation mandelonitrile lyase, putative, expressed
UniProt A0A1B6QKY6
Pfam -
Panther DB PTHR31150 PTHR31150:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14180 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os10g26610.2 : mandelonitrile lyase, putative, expressed
MaizeGDB (Corn) Zm00025a017813
Brachypodium PNT67348 , PNT67349 , KQJ96616 , KQJ96617
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G054400 FAR1 family protein, expressed -
2 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
3 Sobic.004G039200 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
4 Sobic.001G433300 SWIM zinc finger family protein, putative, expressed -
5 Sobic.003G101500 dnaJ domain containing protein, expressed -
6 Sobic.002G151600 R-interacting factor 1, putative, expressed -
7 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
8 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
9 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
10 Sobic.001G360900 peptidyl-prolyl isomerase PASTICCINO1, putative, expressed -
11 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13
12 Sobic.006G052300 dnaJ domain containing protein, expressed -
13 Sobic.004G264300 nuclear matrix constituent protein 1-like, putative, expressed -
14 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
15 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
16 Sobic.004G107200 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
17 Sobic.004G096500 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
18 Sobic.002G320500 MYB family transcription factor, putative, expressed -
19 Sobic.008G092532 - -
20 Sobic.003G438900 FYVE zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic001G253200 Sobic001G253200 Sobic007G054400 Sobic007G054400 Sobic001G253200--Sobic007G054400 Sobic005G079800 Sobic005G079800 Sobic001G253200--Sobic005G079800 Sobic004G039200 Sobic004G039200 Sobic001G253200--Sobic004G039200 Sobic001G433300 Sobic001G433300 Sobic001G253200--Sobic001G433300 Sobic003G101500 Sobic003G101500 Sobic001G253200--Sobic003G101500 Sobic002G151600 Sobic002G151600 Sobic001G253200--Sobic002G151600 Sobic002G309800 Sobic002G309800 Sobic001G253200--Sobic002G309800 Sobic003G197800 Sobic003G197800 Sobic001G253200--Sobic003G197800 Sobic008G100100 Sobic008G100100 Sobic001G253200--Sobic008G100100 Sobic007G054400--Sobic001G253200 Sobic007G054400--Sobic004G039200 Sobic007G054400--Sobic003G101500 Sobic004G145500 Sobic004G145500 Sobic007G054400--Sobic004G145500 Sobic007G054400--Sobic003G197800 Sobic004G258700 Sobic004G258700 Sobic007G054400--Sobic004G258700 Sobic007G054400--Sobic001G433300 Sobic009G065100 Sobic009G065100 Sobic007G054400--Sobic009G065100 Sobic006G052300 Sobic006G052300 Sobic007G054400--Sobic006G052300 Sobic003G438900 Sobic003G438900 Sobic005G079800--Sobic003G438900 Sobic005G079800--Sobic001G253200 Sobic007G191700 Sobic007G191700 Sobic005G079800--Sobic007G191700 Sobic002G153700 Sobic002G153700 Sobic005G079800--Sobic002G153700 Sobic005G021500 Sobic005G021500 Sobic005G079800--Sobic005G021500 Sobic003G427100 Sobic003G427100 Sobic005G079800--Sobic003G427100 Sobic005G079800--Sobic007G054400 Sobic010G194700 Sobic010G194700 Sobic005G079800--Sobic010G194700 Sobic004G096500 Sobic004G096500 Sobic005G079800--Sobic004G096500 Sobic009G024000 Sobic009G024000 Sobic004G039200--Sobic009G024000 Sobic004G039200--Sobic003G101500 Sobic007G161000 Sobic007G161000 Sobic004G039200--Sobic007G161000 Sobic007G065400 Sobic007G065400 Sobic004G039200--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic004G039200--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G039200--Sobic008G028700 Sobic008G009700 Sobic008G009700 Sobic004G039200--Sobic008G009700 Sobic007G117400 Sobic007G117400 Sobic004G039200--Sobic007G117400 Sobic004G039200--Sobic007G054400 Sobic001G433300--Sobic007G054400 Sobic001G433300--Sobic001G253200 Sobic001G433300--Sobic003G101500 Sobic001G433300--Sobic003G438900 Sobic001G433300--Sobic005G079800 Sobic001G433300--Sobic004G039200 Sobic001G433300--Sobic008G113100 Sobic004G264300 Sobic004G264300 Sobic001G433300--Sobic004G264300 Sobic003G293200 Sobic003G293200 Sobic001G433300--Sobic003G293200 Sobic003G101500--Sobic004G039200 Sobic003G101500--Sobic004G258700 Sobic003G101500--Sobic007G161000 Sobic009G260500 Sobic009G260500 Sobic003G101500--Sobic009G260500 Sobic003G101500--Sobic007G054400 Sobic001G456900 Sobic001G456900 Sobic003G101500--Sobic001G456900 Sobic003G101500--Sobic008G113100 Sobic003G101500--Sobic008G028700 Sobic003G101500--Sobic009G024000 Sobic002G157000 Sobic002G157000 Sobic002G151600--Sobic002G157000 Sobic002G151600--Sobic003G197800 Sobic002G320500 Sobic002G320500 Sobic002G151600--Sobic002G320500 Sobic002G313300 Sobic002G313300 Sobic002G151600--Sobic002G313300 Sobic009G000500 Sobic009G000500 Sobic002G151600--Sobic009G000500 Sobic001G094000 Sobic001G094000 Sobic002G151600--Sobic001G094000 Sobic002G151600--Sobic009G065100 Sobic002G248400 Sobic002G248400 Sobic002G151600--Sobic002G248400 Sobic001G303675 Sobic001G303675 Sobic002G151600--Sobic001G303675 Sobic002G309800--Sobic009G065100 Sobic002G309800--Sobic001G253200 Sobic010G056200 Sobic010G056200 Sobic002G309800--Sobic010G056200 Sobic002G309800--Sobic007G054400 Sobic009G215800 Sobic009G215800 Sobic002G309800--Sobic009G215800 Sobic002G309800--Sobic005G079800 Sobic009G070100 Sobic009G070100 Sobic002G309800--Sobic009G070100 Sobic007G078600 Sobic007G078600 Sobic002G309800--Sobic007G078600 Sobic004G087600 Sobic004G087600 Sobic002G309800--Sobic004G087600 Sobic003G197800--Sobic002G157000 Sobic003G197800--Sobic002G320500 Sobic002G186000 Sobic002G186000 Sobic003G197800--Sobic002G186000 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic003G197800--Sobic009G065100 Sobic003G173950 Sobic003G173950 Sobic003G197800--Sobic003G173950 Sobic003G197800--Sobic002G248400 Sobic001G206100 Sobic001G206100 Sobic003G197800--Sobic001G206100 Sobic004G156500 Sobic004G156500 Sobic008G100100--Sobic004G156500 Sobic001G306900 Sobic001G306900 Sobic008G100100--Sobic001G306900 Sobic006G032400 Sobic006G032400 Sobic008G100100--Sobic006G032400 Sobic005G015900 Sobic005G015900 Sobic008G100100--Sobic005G015900 Sobic006G210000 Sobic006G210000 Sobic008G100100--Sobic006G210000 Sobic007G031600 Sobic007G031600 Sobic008G100100--Sobic007G031600 Sobic010G065300 Sobic010G065300 Sobic008G100100--Sobic010G065300 Sobic003G241200 Sobic003G241200 Sobic008G100100--Sobic003G241200 Sobic010G096000 Sobic010G096000 Sobic008G100100--Sobic010G096000
Octagon: transcription factors


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