Gene annotation
Transcriptome id Sobic.001G360900.1
Synonym PAS1, DEI1, Sb01g034480
Functional annotation peptidyl-prolyl isomerase PASTICCINO1, putative, expressed
UniProt C5WYR0
Pfam PF00515 PF13414 PF00254
Panther DB PTHR10516 PTHR10516:SF268
NCBI CDD KOG0543; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT3G54010 : FKBP-type peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os03g25140.1 : peptidyl-prolyl isomerase PASTICCINO1, putative, expressed
MaizeGDB (Corn) Zm00025a002614 , Zm00025a052314
Brachypodium KQK21565
Barley HORVU4Hr1G042800.10 , HORVU4Hr1G042800.11 , HORVU4Hr1G042800.8 , HORVU4Hr1G042800.9 , HORVU4Hr1G042800.2 , HORVU4Hr1G042800.3 , HORVU4Hr1G042800.4 , HORVU4Hr1G042800.5 , HORVU4Hr1G042800.7
Wheat TraesCS1D02G192100 , TraesCS1D02G192100 , TraesCS1D02G192100 , TraesCS1B02G192700 , TraesCS1A02G184600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
2 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
3 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13
4 Sobic.007G054400 FAR1 family protein, expressed -
5 Sobic.001G253200 mandelonitrile lyase, putative, expressed -
6 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
7 Sobic.006G210100 zinc finger domain, LSD1 subclass family protein, expressed -
8 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
9 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
10 Sobic.001G375300 ulp1 protease family protein, putative, expressed K08592: sentrin-specific protease 1
11 Sobic.008G136200 spotted leaf 11, putative, expressed -
12 Sobic.002G151600 R-interacting factor 1, putative, expressed -
13 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
14 Sobic.006G194400 cyclin-T1-4, putative, expressed K15188: cyclin T
15 Sobic.008G131000 domain of unknown function family protein, expressed -
16 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
17 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
18 Sobic.002G313400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12815: DHX38, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
19 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
20 Sobic.004G087600 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G360900 Sobic001G360900 Sobic009G065100 Sobic009G065100 Sobic001G360900--Sobic009G065100 Sobic005G084100 Sobic005G084100 Sobic001G360900--Sobic005G084100 Sobic003G163100 Sobic003G163100 Sobic001G360900--Sobic003G163100 Sobic007G054400 Sobic007G054400 Sobic001G360900--Sobic007G054400 Sobic001G253200 Sobic001G253200 Sobic001G360900--Sobic001G253200 Sobic008G011100 Sobic008G011100 Sobic001G360900--Sobic008G011100 Sobic006G210100 Sobic006G210100 Sobic001G360900--Sobic006G210100 Sobic004G018300 Sobic004G018300 Sobic001G360900--Sobic004G018300 Sobic004G084300 Sobic004G084300 Sobic001G360900--Sobic004G084300 Sobic002G320500 Sobic002G320500 Sobic009G065100--Sobic002G320500 Sobic002G157000 Sobic002G157000 Sobic009G065100--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic009G065100--Sobic008G173900 Sobic009G215800 Sobic009G215800 Sobic009G065100--Sobic009G215800 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic001G107500 Sobic001G107500 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic008G083000 Sobic008G083000 Sobic005G084100--Sobic008G083000 Sobic002G259800 Sobic002G259800 Sobic005G084100--Sobic002G259800 Sobic005G084100--Sobic001G360900 Sobic010G279700 Sobic010G279700 Sobic005G084100--Sobic010G279700 Sobic002G076000 Sobic002G076000 Sobic005G084100--Sobic002G076000 Sobic001G094000 Sobic001G094000 Sobic005G084100--Sobic001G094000 Sobic002G090800 Sobic002G090800 Sobic005G084100--Sobic002G090800 Sobic008G131000 Sobic008G131000 Sobic005G084100--Sobic008G131000 Sobic006G056000 Sobic006G056000 Sobic005G084100--Sobic006G056000 Sobic003G163100--Sobic006G210100 Sobic003G163100--Sobic001G360900 Sobic003G163100--Sobic001G253200 Sobic001G303675 Sobic001G303675 Sobic003G163100--Sobic001G303675 Sobic009G251300 Sobic009G251300 Sobic003G163100--Sobic009G251300 Sobic006G191400 Sobic006G191400 Sobic003G163100--Sobic006G191400 Sobic002G151600 Sobic002G151600 Sobic003G163100--Sobic002G151600 Sobic003G185250 Sobic003G185250 Sobic003G163100--Sobic003G185250 Sobic009G045700 Sobic009G045700 Sobic003G163100--Sobic009G045700 Sobic007G054400--Sobic001G253200 Sobic004G039200 Sobic004G039200 Sobic007G054400--Sobic004G039200 Sobic003G101500 Sobic003G101500 Sobic007G054400--Sobic003G101500 Sobic004G145500 Sobic004G145500 Sobic007G054400--Sobic004G145500 Sobic007G054400--Sobic003G197800 Sobic004G258700 Sobic004G258700 Sobic007G054400--Sobic004G258700 Sobic001G433300 Sobic001G433300 Sobic007G054400--Sobic001G433300 Sobic007G054400--Sobic009G065100 Sobic006G052300 Sobic006G052300 Sobic007G054400--Sobic006G052300 Sobic001G253200--Sobic007G054400 Sobic005G079800 Sobic005G079800 Sobic001G253200--Sobic005G079800 Sobic001G253200--Sobic004G039200 Sobic001G253200--Sobic001G433300 Sobic001G253200--Sobic003G101500 Sobic001G253200--Sobic002G151600 Sobic001G253200--Sobic002G309800 Sobic001G253200--Sobic003G197800 Sobic008G100100 Sobic008G100100 Sobic001G253200--Sobic008G100100 Sobic001G219600 Sobic001G219600 Sobic008G011100--Sobic001G219600 Sobic008G011100--Sobic004G039200 Sobic004G087600 Sobic004G087600 Sobic008G011100--Sobic004G087600 Sobic002G031400 Sobic002G031400 Sobic008G011100--Sobic002G031400 Sobic009G260500 Sobic009G260500 Sobic008G011100--Sobic009G260500 Sobic008G011100--Sobic004G018300 Sobic001G167200 Sobic001G167200 Sobic008G011100--Sobic001G167200 Sobic008G011100--Sobic009G065100 Sobic001G311500 Sobic001G311500 Sobic008G011100--Sobic001G311500 Sobic006G210100--Sobic003G163100 Sobic006G210100--Sobic001G360900 Sobic006G210100--Sobic001G303675 Sobic006G246900 Sobic006G246900 Sobic006G210100--Sobic006G246900 Sobic003G259901 Sobic003G259901 Sobic006G210100--Sobic003G259901 Sobic006G210100--Sobic002G144933 Sobic006G145000 Sobic006G145000 Sobic006G210100--Sobic006G145000 Sobic006G210100--Sobic002G151600 Sobic004G211400 Sobic004G211400 Sobic006G210100--Sobic004G211400 Sobic004G018300--Sobic004G087600 Sobic004G018300--Sobic001G167200 Sobic004G018300--Sobic008G011100 Sobic002G158700 Sobic002G158700 Sobic004G018300--Sobic002G158700 Sobic002G396000 Sobic002G396000 Sobic004G018300--Sobic002G396000 Sobic001G081000 Sobic001G081000 Sobic004G018300--Sobic001G081000 Sobic004G018300--Sobic008G083000 Sobic009G126400 Sobic009G126400 Sobic004G018300--Sobic009G126400 Sobic004G223600 Sobic004G223600 Sobic004G018300--Sobic004G223600 Sobic008G047800 Sobic008G047800 Sobic004G084300--Sobic008G047800 Sobic001G222500 Sobic001G222500 Sobic004G084300--Sobic001G222500 Sobic003G241200 Sobic003G241200 Sobic004G084300--Sobic003G241200 Sobic002G006900 Sobic002G006900 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic009G040600 Sobic009G040600 Sobic004G084300--Sobic009G040600 Sobic008G067600 Sobic008G067600 Sobic004G084300--Sobic008G067600 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400
Octagon: transcription factors


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