Gene annotation
Transcriptome id Sobic.008G083000.3,Sobic.008G083000.1
Synonym Sb08g008280
Functional annotation ZOS12-03 - C2H2 zinc finger protein, expressed
UniProt C5YTZ8
Pfam -
Panther DB PTHR21385 PTHR21385:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63280 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os12g13130.1,LOC_Os12g13130.2 : ZOS12-03 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a054515
Brachypodium KQJ91777
Barley -
Wheat TraesCS5A02G186700 , TraesCS5A02G186700 , TraesCS5D02G192000 , TraesCS5D02G192000
Populus -


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cDNA sequences
Sobic.008G083000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
2 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
3 Sobic.008G131000 domain of unknown function family protein, expressed -
4 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
5 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
6 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
7 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
8 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
9 Sobic.007G000800 expressed protein -
10 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
11 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
12 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
13 Sobic.004G021200 expressed protein -
14 Sobic.002G260900 protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
15 Sobic.003G394300 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.001G167200 DNA-directed polymerase, putative, expressed K03511: DNA polymerase kappa
17 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
18 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
19 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
20 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1


Gene co-expression network
sample Sobic008G083000 Sobic008G083000 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic010G279700 Sobic010G279700 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic001G281600 Sobic001G281600 Sobic008G083000--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic008G083000--Sobic009G050900 Sobic003G401100 Sobic003G401100 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic005G084100--Sobic008G083000 Sobic002G259800 Sobic002G259800 Sobic005G084100--Sobic002G259800 Sobic001G360900 Sobic001G360900 Sobic005G084100--Sobic001G360900 Sobic005G084100--Sobic010G279700 Sobic002G076000 Sobic002G076000 Sobic005G084100--Sobic002G076000 Sobic001G094000 Sobic001G094000 Sobic005G084100--Sobic001G094000 Sobic002G090800 Sobic002G090800 Sobic005G084100--Sobic002G090800 Sobic005G084100--Sobic008G131000 Sobic006G056000 Sobic006G056000 Sobic005G084100--Sobic006G056000 Sobic010G279700--Sobic001G281600 Sobic010G279700--Sobic008G083000 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic007G191700 Sobic007G191700 Sobic010G279700--Sobic007G191700 Sobic005G106500 Sobic005G106500 Sobic010G279700--Sobic005G106500 Sobic008G092300 Sobic008G092300 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic004G021200 Sobic004G021200 Sobic010G279700--Sobic004G021200 Sobic010G236400 Sobic010G236400 Sobic008G131000--Sobic010G236400 Sobic008G131000--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic008G131000--Sobic003G266001 Sobic002G396000 Sobic002G396000 Sobic008G131000--Sobic002G396000 Sobic010G209400 Sobic010G209400 Sobic008G131000--Sobic010G209400 Sobic008G131000--Sobic003G401100 Sobic006G194400 Sobic006G194400 Sobic008G131000--Sobic006G194400 Sobic004G084300 Sobic004G084300 Sobic008G131000--Sobic004G084300 Sobic003G187500 Sobic003G187500 Sobic008G131000--Sobic003G187500 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic001G281600--Sobic004G084300 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic003G141500 Sobic003G141500 Sobic009G050900--Sobic003G141500 Sobic009G050900--Sobic007G203200 Sobic009G050900--Sobic001G281600 Sobic009G050900--Sobic008G083000 Sobic001G219600 Sobic001G219600 Sobic009G050900--Sobic001G219600 Sobic007G071200 Sobic007G071200 Sobic009G050900--Sobic007G071200 Sobic009G050900--Sobic008G011100 Sobic001G493200 Sobic001G493200 Sobic009G050900--Sobic001G493200 Sobic010G140400 Sobic010G140400 Sobic009G050900--Sobic010G140400 Sobic003G401100--Sobic010G236400 Sobic003G401100--Sobic004G084300 Sobic003G401100--Sobic001G281600 Sobic003G081000 Sobic003G081000 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic001G143500 Sobic001G143500 Sobic003G401100--Sobic001G143500 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic008G011100--Sobic001G219600 Sobic004G039200 Sobic004G039200 Sobic008G011100--Sobic004G039200 Sobic004G087600 Sobic004G087600 Sobic008G011100--Sobic004G087600 Sobic002G031400 Sobic002G031400 Sobic008G011100--Sobic002G031400 Sobic009G260500 Sobic009G260500 Sobic008G011100--Sobic009G260500 Sobic008G011100--Sobic004G018300 Sobic001G167200 Sobic001G167200 Sobic008G011100--Sobic001G167200 Sobic009G065100 Sobic009G065100 Sobic008G011100--Sobic009G065100 Sobic001G311500 Sobic001G311500 Sobic008G011100--Sobic001G311500 Sobic004G018300--Sobic004G087600 Sobic004G018300--Sobic001G167200 Sobic004G018300--Sobic008G011100 Sobic002G158700 Sobic002G158700 Sobic004G018300--Sobic002G158700 Sobic004G018300--Sobic002G396000 Sobic001G081000 Sobic001G081000 Sobic004G018300--Sobic001G081000 Sobic004G018300--Sobic008G083000 Sobic009G126400 Sobic009G126400 Sobic004G018300--Sobic009G126400 Sobic004G223600 Sobic004G223600 Sobic004G018300--Sobic004G223600 Sobic007G000800--Sobic002G158700 Sobic007G000800--Sobic003G401100 Sobic008G149800 Sobic008G149800 Sobic007G000800--Sobic008G149800 Sobic010G245000 Sobic010G245000 Sobic007G000800--Sobic010G245000 Sobic007G000800--Sobic002G259800 Sobic007G000800--Sobic001G167200 Sobic004G345700 Sobic004G345700 Sobic007G000800--Sobic004G345700 Sobic007G000800--Sobic008G083000 Sobic008G173100 Sobic008G173100 Sobic007G000800--Sobic008G173100
Octagon: transcription factors


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