Gene annotation
Transcriptome id Sobic.002G260900.1
Synonym Sb02g029560, CERK1, LYSMRLK1
Functional annotation protein kinase domain containing protein, expressed
UniProt C5X5A0
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF205
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13429; chitin elicitor receptor kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G21630 : chitin elicitor receptor kinase 1
RAP-DB (Rice) LOC_Os08g42580.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047610
Brachypodium KQJ99176 , KQJ99177 , KQJ99178
Barley -
Wheat TraesCS7A02G264400 , TraesCS7A02G264400 , TraesCS7B02G162500 , TraesCS7B02G162500 , TraesCS7B02G162500 , TraesCS7B02G162500
Populus -


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cDNA sequences
Sobic.002G260900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
2 Sobic.003G266001 - -
3 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
4 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
5 Sobic.004G021200 expressed protein -
6 Sobic.008G103200 OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed K01322: prolyl oligopeptidase
7 Sobic.010G004100 expressed protein -
8 Sobic.003G394300 tetratricopeptide repeat domain containing protein, expressed -
9 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
10 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
11 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
12 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
13 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
14 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
15 Sobic.003G155900 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
16 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
17 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
18 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
19 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
20 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic002G260900 Sobic002G260900 Sobic008G083000 Sobic008G083000 Sobic002G260900--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic002G260900--Sobic003G266001 Sobic001G493200 Sobic001G493200 Sobic002G260900--Sobic001G493200 Sobic004G113400 Sobic004G113400 Sobic002G260900--Sobic004G113400 Sobic004G021200 Sobic004G021200 Sobic002G260900--Sobic004G021200 Sobic008G103200 Sobic008G103200 Sobic002G260900--Sobic008G103200 Sobic010G004100 Sobic010G004100 Sobic002G260900--Sobic010G004100 Sobic003G394300 Sobic003G394300 Sobic002G260900--Sobic003G394300 Sobic006G237400 Sobic006G237400 Sobic002G260900--Sobic006G237400 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic010G279700 Sobic010G279700 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic001G281600 Sobic001G281600 Sobic008G083000--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic008G083000--Sobic009G050900 Sobic003G401100 Sobic003G401100 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic003G266001--Sobic001G493200 Sobic005G128400 Sobic005G128400 Sobic003G266001--Sobic005G128400 Sobic003G266001--Sobic008G103200 Sobic010G069100 Sobic010G069100 Sobic003G266001--Sobic010G069100 Sobic003G408600 Sobic003G408600 Sobic003G266001--Sobic003G408600 Sobic004G072100 Sobic004G072100 Sobic003G266001--Sobic004G072100 Sobic003G266001--Sobic004G021200 Sobic001G311500 Sobic001G311500 Sobic003G266001--Sobic001G311500 Sobic007G159900 Sobic007G159900 Sobic003G266001--Sobic007G159900 Sobic009G084900 Sobic009G084900 Sobic001G493200--Sobic009G084900 Sobic001G493200--Sobic003G266001 Sobic010G059500 Sobic010G059500 Sobic001G493200--Sobic010G059500 Sobic001G433800 Sobic001G433800 Sobic001G493200--Sobic001G433800 Sobic001G493200--Sobic004G072100 Sobic004G096400 Sobic004G096400 Sobic001G493200--Sobic004G096400 Sobic007G132100 Sobic007G132100 Sobic001G493200--Sobic007G132100 Sobic006G077200 Sobic006G077200 Sobic001G493200--Sobic006G077200 Sobic001G493200--Sobic003G408600 Sobic009G010600 Sobic009G010600 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G329400 Sobic004G329400 Sobic004G113400--Sobic004G329400 Sobic001G058700 Sobic001G058700 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic001G178700 Sobic001G178700 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic002G430000 Sobic002G430000 Sobic004G113400--Sobic002G430000 Sobic004G021200--Sobic003G266001 Sobic004G021200--Sobic008G103200 Sobic004G021200--Sobic010G279700 Sobic004G021200--Sobic001G281600 Sobic004G021200--Sobic008G083000 Sobic006G273200 Sobic006G273200 Sobic004G021200--Sobic006G273200 Sobic005G106500 Sobic005G106500 Sobic004G021200--Sobic005G106500 Sobic007G096000 Sobic007G096000 Sobic004G021200--Sobic007G096000 Sobic002G310200 Sobic002G310200 Sobic004G021200--Sobic002G310200 Sobic008G047800 Sobic008G047800 Sobic008G103200--Sobic008G047800 Sobic008G103200--Sobic003G266001 Sobic004G065100 Sobic004G065100 Sobic008G103200--Sobic004G065100 Sobic001G222500 Sobic001G222500 Sobic008G103200--Sobic001G222500 Sobic008G103200--Sobic010G069100 Sobic008G103200--Sobic002G310200 Sobic004G084300 Sobic004G084300 Sobic008G103200--Sobic004G084300 Sobic001G154900 Sobic001G154900 Sobic008G103200--Sobic001G154900 Sobic008G103200--Sobic004G072100 Sobic007G163100 Sobic007G163100 Sobic010G004100--Sobic007G163100 Sobic010G004100--Sobic001G117200 Sobic002G137400 Sobic002G137400 Sobic010G004100--Sobic002G137400 Sobic003G337300 Sobic003G337300 Sobic010G004100--Sobic003G337300 Sobic003G104000 Sobic003G104000 Sobic010G004100--Sobic003G104000 Sobic010G004100--Sobic004G113400 Sobic010G004100--Sobic003G408600 Sobic004G004300 Sobic004G004300 Sobic010G004100--Sobic004G004300 Sobic001G415300 Sobic001G415300 Sobic010G004100--Sobic001G415300 Sobic003G445400 Sobic003G445400 Sobic003G394300--Sobic003G445400 Sobic003G394300--Sobic004G084300 Sobic003G307000 Sobic003G307000 Sobic003G394300--Sobic003G307000 Sobic004G088200 Sobic004G088200 Sobic003G394300--Sobic004G088200 Sobic005G021500 Sobic005G021500 Sobic003G394300--Sobic005G021500 Sobic008G067600 Sobic008G067600 Sobic003G394300--Sobic008G067600 Sobic004G158200 Sobic004G158200 Sobic003G394300--Sobic004G158200 Sobic009G000500 Sobic009G000500 Sobic003G394300--Sobic009G000500 Sobic007G078600 Sobic007G078600 Sobic003G394300--Sobic007G078600 Sobic001G497300 Sobic001G497300 Sobic006G237400--Sobic001G497300 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic009G249200 Sobic009G249200 Sobic006G237400--Sobic009G249200 Sobic007G217000 Sobic007G217000 Sobic006G237400--Sobic007G217000 Sobic001G253700 Sobic001G253700 Sobic006G237400--Sobic001G253700 Sobic006G237400--Sobic002G310200 Sobic001G474600 Sobic001G474600 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300
Octagon: transcription factors


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