Gene annotation
Transcriptome id Sobic.001G362200.1
Synonym Sb01g034580
Functional annotation DHHC zinc finger domain containing protein, expressed
UniProt C5WYS1
Pfam PF01529
Panther DB PTHR22883
NCBI CDD KOG1312; DHHC-type Zn-finger proteins
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G04970 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os03g24900.1 : DHHC zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052322
Brachypodium KQK21582
Barley HORVU4Hr1G040900.8 , HORVU4Hr1G040900.3 , HORVU4Hr1G040900.2 , HORVU4Hr1G040900.1 , HORVU4Hr1G040900.6 , HORVU4Hr1G040900.5 , HORVU4Hr1G040900.4 , HORVU4Hr1G040900.13 , HORVU4Hr1G040900.12 , HORVU4Hr1G040900.11 , HORVU4Hr1G040900.10 , HORVU4Hr1G040900.14
Wheat TraesCS4A02G161900 , TraesCS4A02G161900 , TraesCS4A02G161900 , TraesCS4B02G162600 , TraesCS4D02G166900 , TraesCS4B02G162600 , TraesCS4B02G162600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G332500 EAP30/Vps36 family domain containing protein, expressed K12190: VPS36, ESCRT-II complex subunit VPS36
2 Sobic.003G109700 expressed protein -
3 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
4 Sobic.001G102700 metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed K01404: leishmanolysin
5 Sobic.001G515000 protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed K00587: ICMT, protein-S-isoprenylcysteine O-methyltransferase
6 Sobic.004G192200 choline transporter-related, putative, expressed -
7 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
8 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
9 Sobic.007G183900 ubiquitin family protein, putative, expressed -
10 Sobic.001G267900 - -
11 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
12 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
13 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
14 Sobic.008G080200 leucine-rich repeat family protein, putative, expressed -
15 Sobic.003G266001 - -
16 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
17 Sobic.010G275500 EF hand family protein, putative, expressed -
18 Sobic.010G118950 - -
19 Sobic.009G158100 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
20 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17


Gene co-expression network
sample Sobic001G362200 Sobic001G362200 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic003G109700 Sobic003G109700 Sobic001G362200--Sobic003G109700 Sobic006G032900 Sobic006G032900 Sobic001G362200--Sobic006G032900 Sobic001G102700 Sobic001G102700 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic002G134600 Sobic002G134600 Sobic001G362200--Sobic002G134600 Sobic007G183900 Sobic007G183900 Sobic001G362200--Sobic007G183900 Sobic003G337300 Sobic003G337300 Sobic003G332500--Sobic003G337300 Sobic004G277200 Sobic004G277200 Sobic003G332500--Sobic004G277200 Sobic003G104000 Sobic003G104000 Sobic003G332500--Sobic003G104000 Sobic006G126100 Sobic006G126100 Sobic003G332500--Sobic006G126100 Sobic003G332500--Sobic001G362200 Sobic007G132100 Sobic007G132100 Sobic003G332500--Sobic007G132100 Sobic003G332500--Sobic004G072100 Sobic001G096000 Sobic001G096000 Sobic003G332500--Sobic001G096000 Sobic010G004100 Sobic010G004100 Sobic003G332500--Sobic010G004100 Sobic003G109700--Sobic001G362200 Sobic010G056000 Sobic010G056000 Sobic003G109700--Sobic010G056000 Sobic003G109700--Sobic006G032900 Sobic008G125501 Sobic008G125501 Sobic003G109700--Sobic008G125501 Sobic003G372800 Sobic003G372800 Sobic003G109700--Sobic003G372800 Sobic010G028800 Sobic010G028800 Sobic003G109700--Sobic010G028800 Sobic001G222250 Sobic001G222250 Sobic003G109700--Sobic001G222250 Sobic001G267900 Sobic001G267900 Sobic003G109700--Sobic001G267900 Sobic009G103600 Sobic009G103600 Sobic003G109700--Sobic009G103600 Sobic006G032900--Sobic001G362200 Sobic006G032900--Sobic003G109700 Sobic001G518400 Sobic001G518400 Sobic006G032900--Sobic001G518400 Sobic002G317300 Sobic002G317300 Sobic006G032900--Sobic002G317300 Sobic001G226700 Sobic001G226700 Sobic006G032900--Sobic001G226700 Sobic008G083000 Sobic008G083000 Sobic006G032900--Sobic008G083000 Sobic003G401100 Sobic003G401100 Sobic006G032900--Sobic003G401100 Sobic006G032900--Sobic001G102700 Sobic006G032900--Sobic009G103600 Sobic001G026500 Sobic001G026500 Sobic001G102700--Sobic001G026500 Sobic001G111600 Sobic001G111600 Sobic001G102700--Sobic001G111600 Sobic001G102700--Sobic001G362200 Sobic002G313400 Sobic002G313400 Sobic001G102700--Sobic002G313400 Sobic010G275500 Sobic010G275500 Sobic001G102700--Sobic010G275500 Sobic008G118200 Sobic008G118200 Sobic001G102700--Sobic008G118200 Sobic001G094900 Sobic001G094900 Sobic001G102700--Sobic001G094900 Sobic005G220000 Sobic005G220000 Sobic001G102700--Sobic005G220000 Sobic005G128400 Sobic005G128400 Sobic001G102700--Sobic005G128400 Sobic004G286500 Sobic004G286500 Sobic001G515000--Sobic004G286500 Sobic001G515000--Sobic004G072100 Sobic010G245000 Sobic010G245000 Sobic001G515000--Sobic010G245000 Sobic002G056701 Sobic002G056701 Sobic001G515000--Sobic002G056701 Sobic010G053800 Sobic010G053800 Sobic001G515000--Sobic010G053800 Sobic006G200600 Sobic006G200600 Sobic001G515000--Sobic006G200600 Sobic003G187200 Sobic003G187200 Sobic001G515000--Sobic003G187200 Sobic002G264200 Sobic002G264200 Sobic001G515000--Sobic002G264200 Sobic007G218000 Sobic007G218000 Sobic001G515000--Sobic007G218000 Sobic004G192200--Sobic001G362200 Sobic004G192200--Sobic003G332500 Sobic008G092300 Sobic008G092300 Sobic004G192200--Sobic008G092300 Sobic004G192200--Sobic006G032900 Sobic003G126600 Sobic003G126600 Sobic004G192200--Sobic003G126600 Sobic002G260900 Sobic002G260900 Sobic004G192200--Sobic002G260900 Sobic010G232900 Sobic010G232900 Sobic004G192200--Sobic010G232900 Sobic004G192200--Sobic001G094900 Sobic003G266001 Sobic003G266001 Sobic004G192200--Sobic003G266001 Sobic004G072100--Sobic007G218000 Sobic004G072100--Sobic010G053800 Sobic004G072100--Sobic010G275500 Sobic004G072100--Sobic007G132100 Sobic006G012500 Sobic006G012500 Sobic004G072100--Sobic006G012500 Sobic010G069100 Sobic010G069100 Sobic004G072100--Sobic010G069100 Sobic010G116600 Sobic010G116600 Sobic004G072100--Sobic010G116600 Sobic008G047800 Sobic008G047800 Sobic004G072100--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic004G072100--Sobic001G155000 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic003G416700 Sobic003G416700 Sobic007G183900--Sobic003G416700 Sobic006G118700 Sobic006G118700 Sobic007G183900--Sobic006G118700 Sobic003G360400 Sobic003G360400 Sobic007G183900--Sobic003G360400 Sobic010G236400 Sobic010G236400 Sobic007G183900--Sobic010G236400 Sobic009G044800 Sobic009G044800 Sobic007G183900--Sobic009G044800 Sobic007G183900--Sobic010G069100 Sobic007G183900--Sobic010G275500 Sobic001G354600 Sobic001G354600 Sobic007G183900--Sobic001G354600 Sobic007G183900--Sobic002G264200
Octagon: transcription factors


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