Gene annotation
Transcriptome id Sobic.001G267900.1
Synonym
Functional annotation -
UniProt A0A1B6QL88
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G267900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G056000 GAGA-binding protein, putative, expressed -
2 Sobic.006G165000 RNA recognition motif containing protein, expressed -
3 Sobic.003G084900 expressed protein -
4 Sobic.010G028800 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
5 Sobic.001G518400 EF hand family protein, putative, expressed -
6 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
7 Sobic.001G094000 expressed protein -
8 Sobic.006G222300 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
10 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
11 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
12 Sobic.009G100050 - -
13 Sobic.006G138000 expressed protein -
14 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
15 Sobic.007G056700 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
16 Sobic.009G210500 expressed protein -
17 Sobic.007G183900 ubiquitin family protein, putative, expressed -
18 Sobic.002G310200 expressed protein -
19 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
20 Sobic.010G096000 OsDegp10 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic001G267900 Sobic001G267900 Sobic010G056000 Sobic010G056000 Sobic001G267900--Sobic010G056000 Sobic006G165000 Sobic006G165000 Sobic001G267900--Sobic006G165000 Sobic003G084900 Sobic003G084900 Sobic001G267900--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic001G267900--Sobic010G028800 Sobic001G518400 Sobic001G518400 Sobic001G267900--Sobic001G518400 Sobic003G241200 Sobic003G241200 Sobic001G267900--Sobic003G241200 Sobic001G094000 Sobic001G094000 Sobic001G267900--Sobic001G094000 Sobic006G222300 Sobic006G222300 Sobic001G267900--Sobic006G222300 Sobic001G362200 Sobic001G362200 Sobic001G267900--Sobic001G362200 Sobic001G111900 Sobic001G111900 Sobic010G056000--Sobic001G111900 Sobic010G056000--Sobic003G084900 Sobic010G056000--Sobic010G028800 Sobic009G127900 Sobic009G127900 Sobic010G056000--Sobic009G127900 Sobic003G087400 Sobic003G087400 Sobic010G056000--Sobic003G087400 Sobic003G187400 Sobic003G187400 Sobic010G056000--Sobic003G187400 Sobic005G077466 Sobic005G077466 Sobic010G056000--Sobic005G077466 Sobic010G056000--Sobic001G094000 Sobic002G157300 Sobic002G157300 Sobic010G056000--Sobic002G157300 Sobic006G165000--Sobic003G241200 Sobic001G155000 Sobic001G155000 Sobic006G165000--Sobic001G155000 Sobic006G165000--Sobic003G084900 Sobic003G200200 Sobic003G200200 Sobic006G165000--Sobic003G200200 Sobic006G165000--Sobic010G028800 Sobic004G145500 Sobic004G145500 Sobic006G165000--Sobic004G145500 Sobic009G126600 Sobic009G126600 Sobic006G165000--Sobic009G126600 Sobic001G222500 Sobic001G222500 Sobic006G165000--Sobic001G222500 Sobic006G032400 Sobic006G032400 Sobic006G165000--Sobic006G032400 Sobic003G084900--Sobic010G056000 Sobic007G096000 Sobic007G096000 Sobic003G084900--Sobic007G096000 Sobic003G084900--Sobic010G028800 Sobic008G173900 Sobic008G173900 Sobic003G084900--Sobic008G173900 Sobic008G054500 Sobic008G054500 Sobic003G084900--Sobic008G054500 Sobic003G084900--Sobic006G165000 Sobic002G144933 Sobic002G144933 Sobic003G084900--Sobic002G144933 Sobic003G084900--Sobic001G111900 Sobic003G268300 Sobic003G268300 Sobic003G084900--Sobic003G268300 Sobic010G028800--Sobic003G084900 Sobic010G101800 Sobic010G101800 Sobic010G028800--Sobic010G101800 Sobic010G028800--Sobic010G056000 Sobic002G310200 Sobic002G310200 Sobic010G028800--Sobic002G310200 Sobic007G186900 Sobic007G186900 Sobic010G028800--Sobic007G186900 Sobic010G028800--Sobic006G165000 Sobic010G028800--Sobic001G155000 Sobic009G083500 Sobic009G083500 Sobic010G028800--Sobic009G083500 Sobic001G407200 Sobic001G407200 Sobic010G028800--Sobic001G407200 Sobic001G170100 Sobic001G170100 Sobic001G518400--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic001G518400--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic010G275500 Sobic010G275500 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G369000 Sobic001G369000 Sobic001G518400--Sobic001G369000 Sobic004G084300 Sobic004G084300 Sobic003G241200--Sobic004G084300 Sobic003G241200--Sobic006G165000 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic010G236400 Sobic010G236400 Sobic003G241200--Sobic010G236400 Sobic003G241200--Sobic003G200200 Sobic002G157000 Sobic002G157000 Sobic003G241200--Sobic002G157000 Sobic007G011400 Sobic007G011400 Sobic001G094000--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G094000--Sobic009G040700 Sobic001G477800 Sobic001G477800 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic006G222300--Sobic009G083500 Sobic001G311500 Sobic001G311500 Sobic006G222300--Sobic001G311500 Sobic007G159900 Sobic007G159900 Sobic006G222300--Sobic007G159900 Sobic004G096500 Sobic004G096500 Sobic006G222300--Sobic004G096500 Sobic010G136600 Sobic010G136600 Sobic006G222300--Sobic010G136600 Sobic006G222300--Sobic010G028800 Sobic009G086900 Sobic009G086900 Sobic006G222300--Sobic009G086900 Sobic001G241200 Sobic001G241200 Sobic006G222300--Sobic001G241200 Sobic002G264200 Sobic002G264200 Sobic006G222300--Sobic002G264200 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic003G109700 Sobic003G109700 Sobic001G362200--Sobic003G109700 Sobic006G032900 Sobic006G032900 Sobic001G362200--Sobic006G032900 Sobic001G102700 Sobic001G102700 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic002G134600 Sobic002G134600 Sobic001G362200--Sobic002G134600 Sobic007G183900 Sobic007G183900 Sobic001G362200--Sobic007G183900
Octagon: transcription factors


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