Gene annotation
Transcriptome id Sobic.006G138000.1,Sobic.006G138000.2
Synonym AtTRS120, TRS120, Sb06g021740
Functional annotation expressed protein
UniProt A0A1Z5RDW7 , A0A1B6PLV3
Pfam PF08626
Panther DB PTHR21512 PTHR21512:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11040 : TRS120
RAP-DB (Rice) LOC_Os04g42370.1 : expressed protein
MaizeGDB (Corn) Zm00025a010778 , Zm00025a056417
Brachypodium KQJ83412 , KQJ83413
Barley HORVU2Hr1G086830.1
Wheat TraesCS2D02G355700 , TraesCS2D02G355700 , TraesCS2D02G355700 , TraesCS2D02G355700 , TraesCS2D02G355700 , TraesCS2A02G356900 , TraesCS2A02G356900 , TraesCS2A02G356900 , TraesCS2B02G376100 , TraesCS2B02G376100 , TraesCS2B02G376100
Populus -


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cDNA sequences
Sobic.006G138000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.001G518400 EF hand family protein, putative, expressed -
3 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
4 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
5 Sobic.010G275500 EF hand family protein, putative, expressed -
6 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
7 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
8 Sobic.001G426600 SH3 domain containing protein, expressed -
9 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
10 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
12 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
13 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
14 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
15 Sobic.001G051700 expressed protein -
16 Sobic.007G183900 ubiquitin family protein, putative, expressed -
17 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
18 Sobic.003G416700 homeobox domain containing protein, expressed -
19 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
20 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63


Gene co-expression network
sample Sobic006G138000 Sobic006G138000 Sobic001G170100 Sobic001G170100 Sobic006G138000--Sobic001G170100 Sobic001G518400 Sobic001G518400 Sobic006G138000--Sobic001G518400 Sobic001G335900 Sobic001G335900 Sobic006G138000--Sobic001G335900 Sobic001G369000 Sobic001G369000 Sobic006G138000--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic006G138000--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic001G426600 Sobic001G426600 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800 Sobic001G170100--Sobic006G138000 Sobic001G170100--Sobic001G518400 Sobic001G170100--Sobic001G426600 Sobic001G170100--Sobic001G335900 Sobic001G170100--Sobic001G369000 Sobic001G170100--Sobic010G275500 Sobic001G170100--Sobic003G240700 Sobic010G147833 Sobic010G147833 Sobic001G170100--Sobic010G147833 Sobic007G019300 Sobic007G019300 Sobic001G170100--Sobic007G019300 Sobic001G518400--Sobic001G170100 Sobic001G518400--Sobic006G138000 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G518400--Sobic001G369000 Sobic001G335900--Sobic001G369000 Sobic001G335900--Sobic006G138000 Sobic001G335900--Sobic001G518400 Sobic001G335900--Sobic001G170100 Sobic001G335900--Sobic003G240700 Sobic001G335900--Sobic009G229600 Sobic009G049400 Sobic009G049400 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic004G039600 Sobic004G039600 Sobic001G369000--Sobic004G039600 Sobic001G369000--Sobic001G335900 Sobic001G369000--Sobic007G120500 Sobic001G369000--Sobic003G240700 Sobic006G163800 Sobic006G163800 Sobic001G369000--Sobic006G163800 Sobic001G369000--Sobic006G138000 Sobic001G369000--Sobic009G049400 Sobic001G369000--Sobic001G426600 Sobic001G369000--Sobic009G229600 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic003G240700--Sobic001G369000 Sobic003G240700--Sobic001G335900 Sobic003G240700--Sobic001G170100 Sobic003G240700--Sobic006G138000 Sobic003G314700 Sobic003G314700 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic003G240700--Sobic009G049400 Sobic003G240700--Sobic001G426600 Sobic003G227100 Sobic003G227100 Sobic003G240700--Sobic003G227100 Sobic003G187500--Sobic010G053800 Sobic003G187500--Sobic004G072100 Sobic007G132100 Sobic007G132100 Sobic003G187500--Sobic007G132100 Sobic002G310200 Sobic002G310200 Sobic003G187500--Sobic002G310200 Sobic003G187500--Sobic010G275500 Sobic008G047800 Sobic008G047800 Sobic003G187500--Sobic008G047800 Sobic003G187500--Sobic004G039600 Sobic003G187500--Sobic006G012500 Sobic010G236400 Sobic010G236400 Sobic003G187500--Sobic010G236400 Sobic001G534800 Sobic001G534800 Sobic001G426600--Sobic001G534800 Sobic001G426600--Sobic001G170100 Sobic001G426600--Sobic009G049400 Sobic001G426600--Sobic001G369000 Sobic001G426600--Sobic010G275500 Sobic001G287500 Sobic001G287500 Sobic001G426600--Sobic001G287500 Sobic001G426600--Sobic007G019300 Sobic001G426600--Sobic004G039600 Sobic004G051200 Sobic004G051200 Sobic001G426600--Sobic004G051200 Sobic010G053800--Sobic006G012500 Sobic010G053800--Sobic010G275500 Sobic010G053800--Sobic004G072100 Sobic010G053800--Sobic001G155000 Sobic010G053800--Sobic003G187500 Sobic010G053800--Sobic008G047800 Sobic010G053800--Sobic010G116600 Sobic010G053800--Sobic006G163800 Sobic010G053800--Sobic004G039600
Octagon: transcription factors


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