Gene annotation
Transcriptome id Sobic.001G051700.1
Synonym Sb01g004750
Functional annotation expressed protein
UniProt C5WX17
Pfam -
Panther DB PTHR37604
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65540 : -
RAP-DB (Rice) LOC_Os03g58780.1 : expressed protein
MaizeGDB (Corn) Zm00025a008605
Brachypodium KQK12640 , KQK12641
Barley HORVU5Hr1G107360.1 , HORVU5Hr1G107360.2 , HORVU5Hr1G107360.3 , HORVU5Hr1G107360.4 , HORVU5Hr1G107360.5 , HORVU5Hr1G107360.6 , HORVU5Hr1G107360.7
Wheat TraesCS5D02G455800 , TraesCS5A02G449300 , TraesCS5A02G449300 , TraesCS5B02G456800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G416700 homeobox domain containing protein, expressed -
2 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
3 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
4 Sobic.002G154000 EDM2, putative, expressed -
5 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
6 Sobic.006G224800 expressed protein -
7 Sobic.007G183300 expressed protein -
8 Sobic.010G275500 EF hand family protein, putative, expressed -
9 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
10 Sobic.006G138000 expressed protein -
11 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
12 Sobic.009G045200 double-stranded RNA binding motif containing protein, expressed -
13 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
14 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
15 Sobic.002G048700 BT1 family protein, putative, expressed -
16 Sobic.001G111600 expressed protein -
17 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
18 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
19 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
20 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -


Gene co-expression network
sample Sobic001G051700 Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic001G051700--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G051700--Sobic002G145800 Sobic006G267600 Sobic006G267600 Sobic001G051700--Sobic006G267600 Sobic002G154000 Sobic002G154000 Sobic001G051700--Sobic002G154000 Sobic006G261400 Sobic006G261400 Sobic001G051700--Sobic006G261400 Sobic006G224800 Sobic006G224800 Sobic001G051700--Sobic006G224800 Sobic007G183300 Sobic007G183300 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic003G416700--Sobic010G275500 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic002G145800--Sobic003G416700 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic002G145800--Sobic001G051700 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic006G267600--Sobic006G261400 Sobic006G267600--Sobic001G051700 Sobic001G393900 Sobic001G393900 Sobic006G267600--Sobic001G393900 Sobic006G267600--Sobic002G154000 Sobic007G063000 Sobic007G063000 Sobic006G267600--Sobic007G063000 Sobic002G048700 Sobic002G048700 Sobic006G267600--Sobic002G048700 Sobic009G158100 Sobic009G158100 Sobic006G267600--Sobic009G158100 Sobic004G322400 Sobic004G322400 Sobic006G267600--Sobic004G322400 Sobic006G267600--Sobic003G416700 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic002G154000--Sobic007G063000 Sobic003G379200 Sobic003G379200 Sobic006G261400--Sobic003G379200 Sobic006G127600 Sobic006G127600 Sobic006G261400--Sobic006G127600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic010G000800 Sobic010G000800 Sobic006G261400--Sobic010G000800 Sobic006G261400--Sobic002G048700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic006G224800--Sobic003G062300 Sobic006G224800--Sobic003G416700 Sobic006G166200 Sobic006G166200 Sobic006G224800--Sobic006G166200 Sobic003G189600 Sobic003G189600 Sobic006G224800--Sobic003G189600 Sobic004G053500 Sobic004G053500 Sobic006G224800--Sobic004G053500 Sobic009G249700 Sobic009G249700 Sobic006G224800--Sobic009G249700 Sobic004G051200 Sobic004G051200 Sobic006G224800--Sobic004G051200 Sobic002G295500 Sobic002G295500 Sobic006G224800--Sobic002G295500 Sobic002G430300 Sobic002G430300 Sobic006G224800--Sobic002G430300 Sobic005G200800 Sobic005G200800 Sobic007G183300--Sobic005G200800 Sobic007G183300--Sobic002G145800 Sobic007G183300--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic007G183300--Sobic003G214600 Sobic010G279900 Sobic010G279900 Sobic007G183300--Sobic010G279900 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G168300 Sobic007G168300 Sobic007G183300--Sobic007G168300 Sobic007G183300--Sobic001G051700 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic010G275500--Sobic009G119000 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic003G062300--Sobic006G224800 Sobic004G309900 Sobic004G309900 Sobic003G062300--Sobic004G309900 Sobic003G062300--Sobic002G145800 Sobic003G062300--Sobic003G416700 Sobic003G062300--Sobic005G220000 Sobic003G062300--Sobic001G051700 Sobic002G164200 Sobic002G164200 Sobic003G062300--Sobic002G164200 Sobic003G062300--Sobic003G214600 Sobic003G062300--Sobic007G183300
Octagon: transcription factors


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