Gene annotation
Transcriptome id Sobic.009G045200.1,Sobic.009G045200.2
Synonym Sb09g003860, DRB2
Functional annotation double-stranded RNA binding motif containing protein, expressed
UniProt C5Z045
Pfam PF00035
Panther DB PTHR10910 PTHR10910:SF104
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28380 : dsRNA-binding protein 2
RAP-DB (Rice) LOC_Os05g05790.1 : double-stranded RNA binding motif containing protein, expressed
MaizeGDB (Corn) Zm00025a055419
Brachypodium -
Barley HORVU1Hr1G021530.1
Wheat TraesCS1B02G119000 , TraesCS1D02G099700 , TraesCS1A02G091200 , TraesCS1A02G091200
Populus -


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cDNA sequences
Sobic.009G045200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G051700 expressed protein -
2 Sobic.003G416700 homeobox domain containing protein, expressed -
3 Sobic.001G393700 expressed protein -
4 Sobic.006G224800 expressed protein -
5 Sobic.010G099800 growth regulator related protein, putative, expressed -
6 Sobic.007G187600 pentatricopeptide, putative, expressed -
7 Sobic.002G430300 HEAT repeat family protein, putative, expressed K06100: symplekin
8 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
9 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
10 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
11 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
12 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
13 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
14 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B
15 Sobic.010G279900 PHD-finger domain containing protein, expressed -
16 Sobic.006G138000 expressed protein -
17 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
18 Sobic.003G227100 adaptin, putative, expressed -
19 Sobic.003G212900 zinc ion binding protein, putative, expressed -
20 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2


Gene co-expression network
sample Sobic009G045200 Sobic009G045200 Sobic001G051700 Sobic001G051700 Sobic009G045200--Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic009G045200--Sobic003G416700 Sobic001G393700 Sobic001G393700 Sobic009G045200--Sobic001G393700 Sobic006G224800 Sobic006G224800 Sobic009G045200--Sobic006G224800 Sobic010G099800 Sobic010G099800 Sobic009G045200--Sobic010G099800 Sobic007G187600 Sobic007G187600 Sobic009G045200--Sobic007G187600 Sobic002G430300 Sobic002G430300 Sobic009G045200--Sobic002G430300 Sobic006G180700 Sobic006G180700 Sobic009G045200--Sobic006G180700 Sobic001G335900 Sobic001G335900 Sobic009G045200--Sobic001G335900 Sobic001G051700--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G051700--Sobic002G145800 Sobic006G267600 Sobic006G267600 Sobic001G051700--Sobic006G267600 Sobic002G154000 Sobic002G154000 Sobic001G051700--Sobic002G154000 Sobic006G261400 Sobic006G261400 Sobic001G051700--Sobic006G261400 Sobic001G051700--Sobic006G224800 Sobic007G183300 Sobic007G183300 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic003G416700--Sobic010G275500 Sobic001G393700--Sobic002G430300 Sobic001G145400 Sobic001G145400 Sobic001G393700--Sobic001G145400 Sobic001G393700--Sobic010G099800 Sobic005G114800 Sobic005G114800 Sobic001G393700--Sobic005G114800 Sobic001G393700--Sobic006G224800 Sobic001G103300 Sobic001G103300 Sobic001G393700--Sobic001G103300 Sobic003G405500 Sobic003G405500 Sobic001G393700--Sobic003G405500 Sobic003G240700 Sobic003G240700 Sobic001G393700--Sobic003G240700 Sobic001G393700--Sobic009G045200 Sobic006G224800--Sobic003G062300 Sobic006G224800--Sobic003G416700 Sobic006G166200 Sobic006G166200 Sobic006G224800--Sobic006G166200 Sobic003G189600 Sobic003G189600 Sobic006G224800--Sobic003G189600 Sobic004G053500 Sobic004G053500 Sobic006G224800--Sobic004G053500 Sobic009G249700 Sobic009G249700 Sobic006G224800--Sobic009G249700 Sobic004G051200 Sobic004G051200 Sobic006G224800--Sobic004G051200 Sobic002G295500 Sobic002G295500 Sobic006G224800--Sobic002G295500 Sobic006G224800--Sobic002G430300 Sobic010G099800--Sobic001G393700 Sobic010G099800--Sobic003G240700 Sobic001G474400 Sobic001G474400 Sobic010G099800--Sobic001G474400 Sobic010G099800--Sobic009G045200 Sobic010G099800--Sobic003G405500 Sobic010G278600 Sobic010G278600 Sobic010G099800--Sobic010G278600 Sobic010G099800--Sobic001G335900 Sobic010G099800--Sobic001G051700 Sobic010G099800--Sobic002G430300 Sobic001G042200 Sobic001G042200 Sobic007G187600--Sobic001G042200 Sobic010G266500 Sobic010G266500 Sobic007G187600--Sobic010G266500 Sobic001G168900 Sobic001G168900 Sobic007G187600--Sobic001G168900 Sobic010G077500 Sobic010G077500 Sobic007G187600--Sobic010G077500 Sobic001G023800 Sobic001G023800 Sobic007G187600--Sobic001G023800 Sobic008G173100 Sobic008G173100 Sobic007G187600--Sobic008G173100 Sobic001G346900 Sobic001G346900 Sobic007G187600--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic007G187600--Sobic001G004100 Sobic007G187600--Sobic003G416700 Sobic004G141800 Sobic004G141800 Sobic002G430300--Sobic004G141800 Sobic002G430300--Sobic001G393700 Sobic002G430300--Sobic003G405500 Sobic003G152400 Sobic003G152400 Sobic002G430300--Sobic003G152400 Sobic002G430300--Sobic001G145400 Sobic005G133800 Sobic005G133800 Sobic002G430300--Sobic005G133800 Sobic001G087600 Sobic001G087600 Sobic002G430300--Sobic001G087600 Sobic002G430300--Sobic006G224800 Sobic002G430300--Sobic002G145800 Sobic009G074700 Sobic009G074700 Sobic006G180700--Sobic009G074700 Sobic001G085700 Sobic001G085700 Sobic006G180700--Sobic001G085700 Sobic006G138000 Sobic006G138000 Sobic006G180700--Sobic006G138000 Sobic009G040800 Sobic009G040800 Sobic006G180700--Sobic009G040800 Sobic009G000400 Sobic009G000400 Sobic006G180700--Sobic009G000400 Sobic006G180700--Sobic001G335900 Sobic006G180700--Sobic009G045200 Sobic006G091000 Sobic006G091000 Sobic006G180700--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic006G180700--Sobic005G040900 Sobic001G369000 Sobic001G369000 Sobic001G335900--Sobic001G369000 Sobic001G335900--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G335900--Sobic001G518400 Sobic001G170100 Sobic001G170100 Sobic001G335900--Sobic001G170100 Sobic001G335900--Sobic003G240700 Sobic009G229600 Sobic009G229600 Sobic001G335900--Sobic009G229600 Sobic009G049400 Sobic009G049400 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100
Octagon: transcription factors


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