Gene annotation
Transcriptome id Sobic.010G099800.2,Sobic.010G099800.1
Synonym Sb10g008680
Functional annotation growth regulator related protein, putative, expressed
UniProt C5Z7J3 , A0A1W0VS86
Pfam PF10250
Panther DB PTHR31933 PTHR31933:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62330 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os06g35410.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a042644 , Zm00025a049410
Brachypodium KQK18783
Barley HORVU7Hr1G040090.8 , HORVU7Hr1G040090.9 , HORVU7Hr1G040090.2 , HORVU7Hr1G040090.32 , HORVU7Hr1G040090.33 , HORVU7Hr1G040090.30 , HORVU7Hr1G040090.31 , HORVU7Hr1G040090.36 , HORVU7Hr1G040090.37 , HORVU7Hr1G040090.34 , HORVU7Hr1G040090.35 , HORVU7Hr1G040090.38 , HORVU7Hr1G040090.18 , HORVU7Hr1G040090.19 , HORVU7Hr1G040090.14 , HORVU7Hr1G040090.15 , HORVU7Hr1G040090.17 , HORVU7Hr1G040090.10 , HORVU7Hr1G040090.11 , HORVU7Hr1G040090.12 , HORVU7Hr1G040090.13 , HORVU7Hr1G040090.16 , HORVU7Hr1G040090.3 , HORVU7Hr1G040090.1 , HORVU7Hr1G040090.6 , HORVU7Hr1G040090.7 , HORVU7Hr1G040090.4 , HORVU7Hr1G040090.5 , HORVU7Hr1G040090.29 , HORVU7Hr1G040090.28 , HORVU7Hr1G040090.25 , HORVU7Hr1G040090.24 , HORVU7Hr1G040090.27 , HORVU7Hr1G040090.26 , HORVU7Hr1G040090.21 , HORVU7Hr1G040090.20 , HORVU7Hr1G040090.23 , HORVU7Hr1G040090.22
Wheat TraesCS7B02G101900 , TraesCS7B02G101900 , TraesCS7D02G197700 , TraesCS7A02G196200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393700 expressed protein -
2 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
3 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
4 Sobic.009G045200 double-stranded RNA binding motif containing protein, expressed -
5 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
6 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
7 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
8 Sobic.001G051700 expressed protein -
9 Sobic.002G430300 HEAT repeat family protein, putative, expressed K06100: symplekin
10 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
11 Sobic.006G100800 expressed protein -
12 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
13 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
14 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
15 Sobic.005G110499 - K14006: protein transport protein SEC23
16 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
17 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G131200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
19 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
20 Sobic.006G033101 - K14401: CPSF1, cleavage and polyadenylation specificity factor subunit 1


Gene co-expression network
sample Sobic010G099800 Sobic010G099800 Sobic001G393700 Sobic001G393700 Sobic010G099800--Sobic001G393700 Sobic003G240700 Sobic003G240700 Sobic010G099800--Sobic003G240700 Sobic001G474400 Sobic001G474400 Sobic010G099800--Sobic001G474400 Sobic009G045200 Sobic009G045200 Sobic010G099800--Sobic009G045200 Sobic003G405500 Sobic003G405500 Sobic010G099800--Sobic003G405500 Sobic010G278600 Sobic010G278600 Sobic010G099800--Sobic010G278600 Sobic001G335900 Sobic001G335900 Sobic010G099800--Sobic001G335900 Sobic001G051700 Sobic001G051700 Sobic010G099800--Sobic001G051700 Sobic002G430300 Sobic002G430300 Sobic010G099800--Sobic002G430300 Sobic001G393700--Sobic002G430300 Sobic001G145400 Sobic001G145400 Sobic001G393700--Sobic001G145400 Sobic001G393700--Sobic010G099800 Sobic005G114800 Sobic005G114800 Sobic001G393700--Sobic005G114800 Sobic006G224800 Sobic006G224800 Sobic001G393700--Sobic006G224800 Sobic001G103300 Sobic001G103300 Sobic001G393700--Sobic001G103300 Sobic001G393700--Sobic003G405500 Sobic001G393700--Sobic003G240700 Sobic001G393700--Sobic009G045200 Sobic001G369000 Sobic001G369000 Sobic003G240700--Sobic001G369000 Sobic003G240700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic003G240700--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic003G240700--Sobic006G138000 Sobic003G314700 Sobic003G314700 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic009G049400 Sobic009G049400 Sobic003G240700--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic003G240700--Sobic001G426600 Sobic003G227100 Sobic003G227100 Sobic003G240700--Sobic003G227100 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic009G045200--Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic009G045200--Sobic003G416700 Sobic009G045200--Sobic001G393700 Sobic009G045200--Sobic006G224800 Sobic009G045200--Sobic010G099800 Sobic007G187600 Sobic007G187600 Sobic009G045200--Sobic007G187600 Sobic009G045200--Sobic002G430300 Sobic006G180700 Sobic006G180700 Sobic009G045200--Sobic006G180700 Sobic009G045200--Sobic001G335900 Sobic003G405500--Sobic001G145400 Sobic008G124800 Sobic008G124800 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic010G059500 Sobic010G059500 Sobic003G405500--Sobic010G059500 Sobic003G405500--Sobic003G314700 Sobic009G040800 Sobic009G040800 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic004G236800 Sobic004G236800 Sobic010G278600--Sobic004G236800 Sobic004G246100 Sobic004G246100 Sobic010G278600--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic010G278600--Sobic001G393700 Sobic001G335900--Sobic001G369000 Sobic001G335900--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G335900--Sobic001G518400 Sobic001G335900--Sobic001G170100 Sobic001G335900--Sobic003G240700 Sobic009G229600 Sobic009G229600 Sobic001G335900--Sobic009G229600 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic001G051700--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G051700--Sobic002G145800 Sobic006G267600 Sobic006G267600 Sobic001G051700--Sobic006G267600 Sobic002G154000 Sobic002G154000 Sobic001G051700--Sobic002G154000 Sobic006G261400 Sobic006G261400 Sobic001G051700--Sobic006G261400 Sobic001G051700--Sobic006G224800 Sobic007G183300 Sobic007G183300 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic002G430300--Sobic004G141800 Sobic002G430300--Sobic001G393700 Sobic002G430300--Sobic003G405500 Sobic003G152400 Sobic003G152400 Sobic002G430300--Sobic003G152400 Sobic002G430300--Sobic001G145400 Sobic005G133800 Sobic005G133800 Sobic002G430300--Sobic005G133800 Sobic001G087600 Sobic001G087600 Sobic002G430300--Sobic001G087600 Sobic002G430300--Sobic006G224800 Sobic002G430300--Sobic002G145800
Octagon: transcription factors


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