Gene annotation
Transcriptome id Sobic.003G240700.1
Synonym Sb03g029780
Functional annotation peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed
UniProt A0A1B6Q508
Pfam -
Panther DB PTHR22847 PTHR22847:SF387
NCBI CDD KOG0315; G-protein beta subunit-like protein (contains WD40 repeats)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G24710 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os01g46510.1 : peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed
MaizeGDB (Corn) Zm00025a038691 , Zm00025a028210
Brachypodium KQK08994
Barley HORVU3Hr1G058910.10 , HORVU3Hr1G058910.11 , HORVU3Hr1G058910.6 , HORVU3Hr1G058910.7 , HORVU3Hr1G058910.4 , HORVU3Hr1G058910.5 , HORVU3Hr1G058910.2 , HORVU3Hr1G058910.3 , HORVU3Hr1G058910.8 , HORVU3Hr1G058910.1 , HORVU3Hr1G058910.9 , HORVU1Hr1G042290.1
Wheat TraesCS3D02G237000 , TraesCS3D02G237000 , TraesCS3D02G237000 , TraesCS3D02G237000 , TraesCS3A02G236500 , TraesCS3A02G236500 , TraesCS3A02G236500 , TraesCS3B02G263200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
2 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
3 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.006G138000 expressed protein -
5 Sobic.003G314700 expressed protein -
6 Sobic.003G293000 expressed protein -
7 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
8 Sobic.001G426600 SH3 domain containing protein, expressed -
9 Sobic.003G227100 adaptin, putative, expressed -
10 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
12 Sobic.001G518400 EF hand family protein, putative, expressed -
13 Sobic.009G229600 tRNA-binding arm, putative, expressed -
14 Sobic.001G393700 expressed protein -
15 Sobic.001G051700 expressed protein -
16 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
17 Sobic.005G059500 expressed protein -
18 Sobic.010G099800 growth regulator related protein, putative, expressed -
19 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
20 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -


Gene co-expression network
sample Sobic003G240700 Sobic003G240700 Sobic001G369000 Sobic001G369000 Sobic003G240700--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic003G240700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic003G240700--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic003G240700--Sobic006G138000 Sobic003G314700 Sobic003G314700 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic009G049400 Sobic009G049400 Sobic003G240700--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic003G240700--Sobic001G426600 Sobic003G227100 Sobic003G227100 Sobic003G240700--Sobic003G227100 Sobic004G039600 Sobic004G039600 Sobic001G369000--Sobic004G039600 Sobic001G369000--Sobic001G335900 Sobic007G120500 Sobic007G120500 Sobic001G369000--Sobic007G120500 Sobic001G369000--Sobic003G240700 Sobic006G163800 Sobic006G163800 Sobic001G369000--Sobic006G163800 Sobic001G369000--Sobic006G138000 Sobic001G369000--Sobic009G049400 Sobic001G369000--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic001G369000--Sobic009G229600 Sobic001G335900--Sobic001G369000 Sobic001G335900--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G335900--Sobic001G518400 Sobic001G335900--Sobic001G170100 Sobic001G335900--Sobic003G240700 Sobic001G335900--Sobic009G229600 Sobic001G335900--Sobic009G049400 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic001G170100--Sobic006G138000 Sobic001G170100--Sobic001G518400 Sobic001G170100--Sobic001G426600 Sobic001G170100--Sobic001G335900 Sobic001G170100--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic001G170100--Sobic010G275500 Sobic001G170100--Sobic003G240700 Sobic010G147833 Sobic010G147833 Sobic001G170100--Sobic010G147833 Sobic007G019300 Sobic007G019300 Sobic001G170100--Sobic007G019300 Sobic006G138000--Sobic001G170100 Sobic006G138000--Sobic001G518400 Sobic006G138000--Sobic001G335900 Sobic006G138000--Sobic001G369000 Sobic006G138000--Sobic010G275500 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700 Sobic003G293000--Sobic003G240700 Sobic001G012900 Sobic001G012900 Sobic003G293000--Sobic001G012900 Sobic003G293000--Sobic009G049400 Sobic003G293000--Sobic001G335900 Sobic003G005900 Sobic003G005900 Sobic003G293000--Sobic003G005900 Sobic003G334700 Sobic003G334700 Sobic003G293000--Sobic003G334700 Sobic005G059500 Sobic005G059500 Sobic003G293000--Sobic005G059500 Sobic001G474400 Sobic001G474400 Sobic003G293000--Sobic001G474400 Sobic003G293000--Sobic003G314700 Sobic009G049400--Sobic001G369000 Sobic009G049400--Sobic009G229600 Sobic009G049400--Sobic001G426600 Sobic003G394200 Sobic003G394200 Sobic009G049400--Sobic003G394200 Sobic009G049400--Sobic001G335900 Sobic009G049400--Sobic006G163800 Sobic003G189600 Sobic003G189600 Sobic009G049400--Sobic003G189600 Sobic009G049400--Sobic004G039600 Sobic009G049400--Sobic003G240700 Sobic001G534800 Sobic001G534800 Sobic001G426600--Sobic001G534800 Sobic001G426600--Sobic001G170100 Sobic001G426600--Sobic009G049400 Sobic001G426600--Sobic001G369000 Sobic001G426600--Sobic010G275500 Sobic001G287500 Sobic001G287500 Sobic001G426600--Sobic001G287500 Sobic001G426600--Sobic007G019300 Sobic001G426600--Sobic004G039600 Sobic004G051200 Sobic004G051200 Sobic001G426600--Sobic004G051200 Sobic006G224800 Sobic006G224800 Sobic003G227100--Sobic006G224800 Sobic005G110499 Sobic005G110499 Sobic003G227100--Sobic005G110499 Sobic003G227100--Sobic003G240700 Sobic003G227100--Sobic001G369000 Sobic003G050900 Sobic003G050900 Sobic003G227100--Sobic003G050900 Sobic004G261600 Sobic004G261600 Sobic003G227100--Sobic004G261600 Sobic008G040700 Sobic008G040700 Sobic003G227100--Sobic008G040700 Sobic006G056200 Sobic006G056200 Sobic003G227100--Sobic006G056200 Sobic003G209200 Sobic003G209200 Sobic003G227100--Sobic003G209200
Octagon: transcription factors


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