Gene annotation
Transcriptome id Sobic.009G120500.1
Synonym Sb09g018830
Functional annotation golgi transport complex protein-related, putative, expressed
UniProt C5YXB9
Pfam PF10392
Panther DB PTHR13228 PTHR13228:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017119; Golgi transport complex GO:0006891intra-Golgi vesicle-mediated transport


Orthologs (automatic annotation)
TAIR AT1G67930 : Golgi transport complex protein-related
RAP-DB (Rice) LOC_Os05g31490.1 : golgi transport complex protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a043509
Brachypodium KQK06571
Barley HORVU1Hr1G057490.3 , HORVU1Hr1G057490.4
Wheat TraesCS1D02G238700 , TraesCS1A02G233600 , TraesCS1B02G250300
Populus -


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cDNA sequences
Sobic.009G120500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
2 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
3 Sobic.003G314700 expressed protein -
4 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
5 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
6 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
7 Sobic.004G358900 Sec1 family transport protein, putative, expressed -
8 Sobic.005G059500 expressed protein -
9 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
10 Sobic.006G041100 nuclear transport factor 2, putative, expressed -
11 Sobic.001G526300 WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
12 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
13 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
14 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
15 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
16 Sobic.003G293000 expressed protein -
17 Sobic.004G034300 transducin family protein, putative, expressed -
18 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
19 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
20 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)


Gene co-expression network
sample Sobic009G120500 Sobic009G120500 Sobic001G117800 Sobic001G117800 Sobic009G120500--Sobic001G117800 Sobic003G240700 Sobic003G240700 Sobic009G120500--Sobic003G240700 Sobic003G314700 Sobic003G314700 Sobic009G120500--Sobic003G314700 Sobic001G474400 Sobic001G474400 Sobic009G120500--Sobic001G474400 Sobic006G265600 Sobic006G265600 Sobic009G120500--Sobic006G265600 Sobic003G029600 Sobic003G029600 Sobic009G120500--Sobic003G029600 Sobic004G358900 Sobic004G358900 Sobic009G120500--Sobic004G358900 Sobic005G059500 Sobic005G059500 Sobic009G120500--Sobic005G059500 Sobic001G449900 Sobic001G449900 Sobic009G120500--Sobic001G449900 Sobic001G117800--Sobic003G029600 Sobic002G070600 Sobic002G070600 Sobic001G117800--Sobic002G070600 Sobic009G118900 Sobic009G118900 Sobic001G117800--Sobic009G118900 Sobic002G340900 Sobic002G340900 Sobic001G117800--Sobic002G340900 Sobic001G117800--Sobic001G474400 Sobic008G072200 Sobic008G072200 Sobic001G117800--Sobic008G072200 Sobic001G117800--Sobic003G314700 Sobic001G117800--Sobic009G120500 Sobic001G437400 Sobic001G437400 Sobic001G117800--Sobic001G437400 Sobic001G369000 Sobic001G369000 Sobic003G240700--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic003G240700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic003G240700--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic003G240700--Sobic006G138000 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic009G049400 Sobic009G049400 Sobic003G240700--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic003G240700--Sobic001G426600 Sobic003G227100 Sobic003G227100 Sobic003G240700--Sobic003G227100 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic003G314700--Sobic001G437400 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600 Sobic006G265600--Sobic003G397900 Sobic006G265600--Sobic001G474400 Sobic002G399900 Sobic002G399900 Sobic006G265600--Sobic002G399900 Sobic003G005900 Sobic003G005900 Sobic006G265600--Sobic003G005900 Sobic001G151600 Sobic001G151600 Sobic006G265600--Sobic001G151600 Sobic002G075900 Sobic002G075900 Sobic006G265600--Sobic002G075900 Sobic002G160700 Sobic002G160700 Sobic006G265600--Sobic002G160700 Sobic006G265600--Sobic009G120500 Sobic002G364900 Sobic002G364900 Sobic006G265600--Sobic002G364900 Sobic003G029600--Sobic001G117800 Sobic003G029600--Sobic003G314700 Sobic003G029600--Sobic002G070600 Sobic003G029600--Sobic002G340900 Sobic001G301200 Sobic001G301200 Sobic003G029600--Sobic001G301200 Sobic003G029600--Sobic001G449900 Sobic003G029600--Sobic008G124800 Sobic003G029600--Sobic009G118900 Sobic003G029600--Sobic001G437400 Sobic004G358900--Sobic009G120500 Sobic004G358900--Sobic003G005900 Sobic008G125000 Sobic008G125000 Sobic004G358900--Sobic008G125000 Sobic003G348200 Sobic003G348200 Sobic004G358900--Sobic003G348200 Sobic003G062400 Sobic003G062400 Sobic004G358900--Sobic003G062400 Sobic004G277400 Sobic004G277400 Sobic004G358900--Sobic004G277400 Sobic001G205900 Sobic001G205900 Sobic004G358900--Sobic001G205900 Sobic004G358900--Sobic006G265600 Sobic002G223800 Sobic002G223800 Sobic004G358900--Sobic002G223800 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic001G118000 Sobic001G118000 Sobic005G059500--Sobic001G118000 Sobic005G059500--Sobic010G223400 Sobic001G012900 Sobic001G012900 Sobic005G059500--Sobic001G012900 Sobic003G346400 Sobic003G346400 Sobic005G059500--Sobic003G346400 Sobic005G059500--Sobic005G114500 Sobic005G059500--Sobic001G474400 Sobic009G122500 Sobic009G122500 Sobic005G059500--Sobic009G122500 Sobic005G059500--Sobic002G070600 Sobic010G223300 Sobic010G223300 Sobic001G449900--Sobic010G223300 Sobic002G020700 Sobic002G020700 Sobic001G449900--Sobic002G020700 Sobic008G085700 Sobic008G085700 Sobic001G449900--Sobic008G085700 Sobic001G449900--Sobic001G301200 Sobic003G189600 Sobic003G189600 Sobic001G449900--Sobic003G189600 Sobic001G428800 Sobic001G428800 Sobic001G449900--Sobic001G428800 Sobic001G449900--Sobic003G029600 Sobic010G020400 Sobic010G020400 Sobic001G449900--Sobic010G020400 Sobic007G005500 Sobic007G005500 Sobic001G449900--Sobic007G005500
Octagon: transcription factors


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