Gene annotation
Transcriptome id Sobic.002G423500.1
Synonym Sb02g043440
Functional annotation T-complex protein, putative, expressed
UniProt C5X6A0
Pfam PF00118
Panther DB PTHR11353 PTHR11353:SF21
NCBI CDD -
KEGG Orthology K09498; T-complex protein 1 subunit zeta
Gene Ontology GO:0005524; ATP binding GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT3G02530 : TCP-1/cpn60 chaperonin family protein
RAP-DB (Rice) LOC_Os05g05470.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) Zm00025a015472
Brachypodium KQJ93371
Barley HORVU6Hr1G091690.3 , HORVU6Hr1G091690.2 , HORVU6Hr1G091690.1 , HORVU6Hr1G091690.6 , HORVU6Hr1G091690.5 , HORVU6Hr1G091690.4
Wheat TraesCS6A02G399300 , TraesCS6D02G383500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
2 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
3 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
4 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
5 Sobic.004G326600 T-complex protein, putative, expressed K09493: CCT1, T-complex protein 1 subunit alpha
6 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
7 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
8 Sobic.006G041100 nuclear transport factor 2, putative, expressed -
9 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
10 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
11 Sobic.001G251600 SET domain protein 123, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
12 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
13 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
14 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
15 Sobic.003G134800 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
16 Sobic.009G231700 GTP binding protein, putative, expressed -
17 Sobic.008G072200 coatomer subunit delta, putative, expressed -
18 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta
19 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
20 Sobic.002G402500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9


Gene co-expression network
sample Sobic002G423500 Sobic002G423500 Sobic005G163700 Sobic005G163700 Sobic002G423500--Sobic005G163700 Sobic004G047200 Sobic004G047200 Sobic002G423500--Sobic004G047200 Sobic002G014400 Sobic002G014400 Sobic002G423500--Sobic002G014400 Sobic001G460500 Sobic001G460500 Sobic002G423500--Sobic001G460500 Sobic004G326600 Sobic004G326600 Sobic002G423500--Sobic004G326600 Sobic004G215700 Sobic004G215700 Sobic002G423500--Sobic004G215700 Sobic001G522000 Sobic001G522000 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic001G467100 Sobic001G467100 Sobic002G423500--Sobic001G467100 Sobic005G163700--Sobic001G460500 Sobic005G163700--Sobic002G423500 Sobic005G163700--Sobic002G014400 Sobic005G163700--Sobic004G047200 Sobic005G163700--Sobic004G215700 Sobic005G163700--Sobic004G326600 Sobic005G163700--Sobic001G467100 Sobic004G208500 Sobic004G208500 Sobic005G163700--Sobic004G208500 Sobic002G412700 Sobic002G412700 Sobic005G163700--Sobic002G412700 Sobic004G047200--Sobic004G326600 Sobic004G047200--Sobic002G423500 Sobic004G047200--Sobic002G014400 Sobic001G008500 Sobic001G008500 Sobic004G047200--Sobic001G008500 Sobic004G047200--Sobic005G163700 Sobic001G530800 Sobic001G530800 Sobic004G047200--Sobic001G530800 Sobic004G047200--Sobic004G215700 Sobic004G047200--Sobic001G460500 Sobic001G371100 Sobic001G371100 Sobic004G047200--Sobic001G371100 Sobic002G014400--Sobic004G047200 Sobic002G014400--Sobic004G326600 Sobic002G014400--Sobic002G423500 Sobic002G014400--Sobic005G163700 Sobic002G341800 Sobic002G341800 Sobic002G014400--Sobic002G341800 Sobic002G014400--Sobic001G460500 Sobic002G394600 Sobic002G394600 Sobic002G014400--Sobic002G394600 Sobic006G044600 Sobic006G044600 Sobic002G014400--Sobic006G044600 Sobic001G251600 Sobic001G251600 Sobic002G014400--Sobic001G251600 Sobic001G460500--Sobic005G163700 Sobic001G460500--Sobic002G423500 Sobic001G460500--Sobic002G014400 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic001G460500--Sobic004G047200 Sobic001G460500--Sobic002G412700 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic004G326600--Sobic004G047200 Sobic004G326600--Sobic002G014400 Sobic004G326600--Sobic002G423500 Sobic001G091900 Sobic001G091900 Sobic004G326600--Sobic001G091900 Sobic004G326600--Sobic004G215700 Sobic004G326600--Sobic002G341800 Sobic004G326600--Sobic005G163700 Sobic002G143000 Sobic002G143000 Sobic004G326600--Sobic002G143000 Sobic001G458700 Sobic001G458700 Sobic004G326600--Sobic001G458700 Sobic004G215700--Sobic002G423500 Sobic004G215700--Sobic004G326600 Sobic004G215700--Sobic005G163700 Sobic006G024700 Sobic006G024700 Sobic004G215700--Sobic006G024700 Sobic004G215700--Sobic004G047200 Sobic004G215700--Sobic001G460500 Sobic003G008600 Sobic003G008600 Sobic004G215700--Sobic003G008600 Sobic003G388900 Sobic003G388900 Sobic004G215700--Sobic003G388900 Sobic004G212100 Sobic004G212100 Sobic004G215700--Sobic004G212100 Sobic002G367800 Sobic002G367800 Sobic001G522000--Sobic002G367800 Sobic001G522000--Sobic002G423500 Sobic001G490500 Sobic001G490500 Sobic001G522000--Sobic001G490500 Sobic001G522000--Sobic006G041100 Sobic001G522000--Sobic003G388900 Sobic003G205400 Sobic003G205400 Sobic001G522000--Sobic003G205400 Sobic002G402500 Sobic002G402500 Sobic001G522000--Sobic002G402500 Sobic006G265600 Sobic006G265600 Sobic001G522000--Sobic006G265600 Sobic001G117800 Sobic001G117800 Sobic001G522000--Sobic001G117800 Sobic006G041100--Sobic002G423500 Sobic006G041100--Sobic006G265600 Sobic006G041100--Sobic001G522000 Sobic006G041100--Sobic002G402500 Sobic009G120500 Sobic009G120500 Sobic006G041100--Sobic009G120500 Sobic006G041100--Sobic005G163700 Sobic006G041100--Sobic004G047200 Sobic006G041100--Sobic001G008500 Sobic006G041100--Sobic001G530800 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499
Octagon: transcription factors


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