Gene annotation
Transcriptome id Sobic.005G163700.1
Synonym Sb05g022470
Functional annotation T-complex protein, putative, expressed
UniProt C5Y4Y9 , C5YNR0
Pfam PF00118
Panther DB PTHR11353:SF19 PTHR11353
NCBI CDD -
KEGG Orthology K09500; T-complex protein 1 subunit theta
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G03960 : TCP-1/cpn60 chaperonin family protein
RAP-DB (Rice) LOC_Os03g59020.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) Zm00025a015792 , Zm00025a033884
Brachypodium KQJ88116
Barley HORVU4Hr1G040660.2 , HORVU4Hr1G040660.3 , HORVU4Hr1G040660.1 , HORVU4Hr1G040660.4 , HORVU4Hr1G040660.5
Wheat TraesCS4A02G164900 , TraesCS4A02G164900 , TraesCS6B02G010900 , TraesCS4B02G165400 , TraesCS4D02G157300 , TraesCS6D02G008000
Populus PNS90213 , PNS90214 , PNT06924


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
2 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
3 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
4 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
5 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
6 Sobic.004G326600 T-complex protein, putative, expressed K09493: CCT1, T-complex protein 1 subunit alpha
7 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
8 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
9 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
10 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
11 Sobic.006G041100 nuclear transport factor 2, putative, expressed -
12 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
13 Sobic.001G251600 SET domain protein 123, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
14 Sobic.009G226400 dynamin family protein, putative, expressed -
15 Sobic.009G231700 GTP binding protein, putative, expressed -
16 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.008G072200 coatomer subunit delta, putative, expressed -
18 Sobic.003G235000 protein kinase domain containing protein, expressed -
19 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
20 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6


Gene co-expression network
sample Sobic005G163700 Sobic005G163700 Sobic001G460500 Sobic001G460500 Sobic005G163700--Sobic001G460500 Sobic002G423500 Sobic002G423500 Sobic005G163700--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic005G163700--Sobic002G014400 Sobic004G047200 Sobic004G047200 Sobic005G163700--Sobic004G047200 Sobic004G215700 Sobic004G215700 Sobic005G163700--Sobic004G215700 Sobic004G326600 Sobic004G326600 Sobic005G163700--Sobic004G326600 Sobic001G467100 Sobic001G467100 Sobic005G163700--Sobic001G467100 Sobic004G208500 Sobic004G208500 Sobic005G163700--Sobic004G208500 Sobic002G412700 Sobic002G412700 Sobic005G163700--Sobic002G412700 Sobic001G460500--Sobic005G163700 Sobic001G460500--Sobic002G423500 Sobic001G460500--Sobic002G014400 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic001G460500--Sobic004G047200 Sobic001G460500--Sobic002G412700 Sobic001G251600 Sobic001G251600 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic002G423500--Sobic005G163700 Sobic002G423500--Sobic004G047200 Sobic002G423500--Sobic002G014400 Sobic002G423500--Sobic001G460500 Sobic002G423500--Sobic004G326600 Sobic002G423500--Sobic004G215700 Sobic001G522000 Sobic001G522000 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic002G423500--Sobic001G467100 Sobic002G014400--Sobic004G047200 Sobic002G014400--Sobic004G326600 Sobic002G014400--Sobic002G423500 Sobic002G014400--Sobic005G163700 Sobic002G341800 Sobic002G341800 Sobic002G014400--Sobic002G341800 Sobic002G014400--Sobic001G460500 Sobic002G394600 Sobic002G394600 Sobic002G014400--Sobic002G394600 Sobic006G044600 Sobic006G044600 Sobic002G014400--Sobic006G044600 Sobic002G014400--Sobic001G251600 Sobic004G047200--Sobic004G326600 Sobic004G047200--Sobic002G423500 Sobic004G047200--Sobic002G014400 Sobic001G008500 Sobic001G008500 Sobic004G047200--Sobic001G008500 Sobic004G047200--Sobic005G163700 Sobic001G530800 Sobic001G530800 Sobic004G047200--Sobic001G530800 Sobic004G047200--Sobic004G215700 Sobic004G047200--Sobic001G460500 Sobic001G371100 Sobic001G371100 Sobic004G047200--Sobic001G371100 Sobic004G215700--Sobic002G423500 Sobic004G215700--Sobic004G326600 Sobic004G215700--Sobic005G163700 Sobic006G024700 Sobic006G024700 Sobic004G215700--Sobic006G024700 Sobic004G215700--Sobic004G047200 Sobic004G215700--Sobic001G460500 Sobic003G008600 Sobic003G008600 Sobic004G215700--Sobic003G008600 Sobic003G388900 Sobic003G388900 Sobic004G215700--Sobic003G388900 Sobic004G212100 Sobic004G212100 Sobic004G215700--Sobic004G212100 Sobic004G326600--Sobic004G047200 Sobic004G326600--Sobic002G014400 Sobic004G326600--Sobic002G423500 Sobic001G091900 Sobic001G091900 Sobic004G326600--Sobic001G091900 Sobic004G326600--Sobic004G215700 Sobic004G326600--Sobic002G341800 Sobic004G326600--Sobic005G163700 Sobic002G143000 Sobic002G143000 Sobic004G326600--Sobic002G143000 Sobic001G458700 Sobic001G458700 Sobic004G326600--Sobic001G458700 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499 Sobic004G208500--Sobic001G467100 Sobic004G208500--Sobic001G099900 Sobic001G015400 Sobic001G015400 Sobic004G208500--Sobic001G015400 Sobic002G408900 Sobic002G408900 Sobic004G208500--Sobic002G408900 Sobic002G150700 Sobic002G150700 Sobic004G208500--Sobic002G150700 Sobic004G208500--Sobic001G161700 Sobic010G223300 Sobic010G223300 Sobic004G208500--Sobic010G223300 Sobic004G208500--Sobic005G110499 Sobic004G208500--Sobic005G163700 Sobic001G248100 Sobic001G248100 Sobic002G412700--Sobic001G248100 Sobic003G405500 Sobic003G405500 Sobic002G412700--Sobic003G405500 Sobic003G314700 Sobic003G314700 Sobic002G412700--Sobic003G314700 Sobic004G034700 Sobic004G034700 Sobic002G412700--Sobic004G034700 Sobic003G209400 Sobic003G209400 Sobic002G412700--Sobic003G209400 Sobic007G047600 Sobic007G047600 Sobic002G412700--Sobic007G047600 Sobic010G085200 Sobic010G085200 Sobic002G412700--Sobic010G085200 Sobic002G119600 Sobic002G119600 Sobic002G412700--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic002G412700--Sobic010G139500
Octagon: transcription factors


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