Gene annotation
Transcriptome id Sobic.001G460500.1
Synonym Sb01g043220
Functional annotation T-complex protein, putative, expressed
UniProt C5WTN6
Pfam PF00118
Panther DB PTHR11353 PTHR11353:SF63
NCBI CDD -
KEGG Orthology K09495; CCT3, T-complex protein 1 subunit gamma
Gene Ontology GO:0005524; ATP binding GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT5G26360 : TCP-1/cpn60 chaperonin family protein
RAP-DB (Rice) LOC_Os06g34690.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) Zm00025a001260 , Zm00025a034517
Brachypodium KQK06452 , KQK18144
Barley HORVU7Hr1G080310.1 , HORVU7Hr1G080310.3 , HORVU7Hr1G080310.2 , HORVU7Hr1G080310.5 , HORVU7Hr1G080310.4 , HORVU7Hr1G080310.7 , HORVU7Hr1G080310.6
Wheat TraesCS7B02G237000 , TraesCS7D02G332900 , TraesCS7D02G332900 , TraesCS7B02G237000 , TraesCS7A02G346200
Populus -


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cDNA sequences
Sobic.001G460500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
2 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
3 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
4 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
5 Sobic.010G081700 PPR repeat domain containing protein, putative, expressed -
6 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
7 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
8 Sobic.001G251600 SET domain protein 123, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
9 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
10 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
11 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
12 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
13 Sobic.009G249800 AARP2CN domain containing protein, expressed K14799: pre-rRNA-processing protein TSR1
14 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
15 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
16 Sobic.004G326600 T-complex protein, putative, expressed K09493: CCT1, T-complex protein 1 subunit alpha
17 Sobic.006G010400 tRNA-dihydrouridine synthase 3-like, putative, expressed K05544: tRNA-dihydrouridine synthase 3
18 Sobic.002G408900 adenyl cyclase, putative, expressed -
19 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
20 Sobic.007G047600 expressed protein -


Gene co-expression network
sample Sobic001G460500 Sobic001G460500 Sobic005G163700 Sobic005G163700 Sobic001G460500--Sobic005G163700 Sobic002G423500 Sobic002G423500 Sobic001G460500--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic001G460500--Sobic002G014400 Sobic004G208500 Sobic004G208500 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic004G047200 Sobic004G047200 Sobic001G460500--Sobic004G047200 Sobic002G412700 Sobic002G412700 Sobic001G460500--Sobic002G412700 Sobic001G251600 Sobic001G251600 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic005G163700--Sobic001G460500 Sobic005G163700--Sobic002G423500 Sobic005G163700--Sobic002G014400 Sobic005G163700--Sobic004G047200 Sobic004G215700 Sobic004G215700 Sobic005G163700--Sobic004G215700 Sobic004G326600 Sobic004G326600 Sobic005G163700--Sobic004G326600 Sobic001G467100 Sobic001G467100 Sobic005G163700--Sobic001G467100 Sobic005G163700--Sobic004G208500 Sobic005G163700--Sobic002G412700 Sobic002G423500--Sobic005G163700 Sobic002G423500--Sobic004G047200 Sobic002G423500--Sobic002G014400 Sobic002G423500--Sobic001G460500 Sobic002G423500--Sobic004G326600 Sobic002G423500--Sobic004G215700 Sobic001G522000 Sobic001G522000 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic002G423500--Sobic001G467100 Sobic002G014400--Sobic004G047200 Sobic002G014400--Sobic004G326600 Sobic002G014400--Sobic002G423500 Sobic002G014400--Sobic005G163700 Sobic002G341800 Sobic002G341800 Sobic002G014400--Sobic002G341800 Sobic002G014400--Sobic001G460500 Sobic002G394600 Sobic002G394600 Sobic002G014400--Sobic002G394600 Sobic006G044600 Sobic006G044600 Sobic002G014400--Sobic006G044600 Sobic002G014400--Sobic001G251600 Sobic004G208500--Sobic001G467100 Sobic001G099900 Sobic001G099900 Sobic004G208500--Sobic001G099900 Sobic001G015400 Sobic001G015400 Sobic004G208500--Sobic001G015400 Sobic002G408900 Sobic002G408900 Sobic004G208500--Sobic002G408900 Sobic002G150700 Sobic002G150700 Sobic004G208500--Sobic002G150700 Sobic001G161700 Sobic001G161700 Sobic004G208500--Sobic001G161700 Sobic010G223300 Sobic010G223300 Sobic004G208500--Sobic010G223300 Sobic005G110499 Sobic005G110499 Sobic004G208500--Sobic005G110499 Sobic004G208500--Sobic005G163700 Sobic010G081700--Sobic001G460500 Sobic004G348600 Sobic004G348600 Sobic010G081700--Sobic004G348600 Sobic010G081700--Sobic004G208500 Sobic004G322300 Sobic004G322300 Sobic010G081700--Sobic004G322300 Sobic002G398700 Sobic002G398700 Sobic010G081700--Sobic002G398700 Sobic006G106300 Sobic006G106300 Sobic010G081700--Sobic006G106300 Sobic010G081700--Sobic002G408900 Sobic004G356200 Sobic004G356200 Sobic010G081700--Sobic004G356200 Sobic010G081700--Sobic002G150700 Sobic004G047200--Sobic004G326600 Sobic004G047200--Sobic002G423500 Sobic004G047200--Sobic002G014400 Sobic001G008500 Sobic001G008500 Sobic004G047200--Sobic001G008500 Sobic004G047200--Sobic005G163700 Sobic001G530800 Sobic001G530800 Sobic004G047200--Sobic001G530800 Sobic004G047200--Sobic004G215700 Sobic004G047200--Sobic001G460500 Sobic001G371100 Sobic001G371100 Sobic004G047200--Sobic001G371100 Sobic001G248100 Sobic001G248100 Sobic002G412700--Sobic001G248100 Sobic003G405500 Sobic003G405500 Sobic002G412700--Sobic003G405500 Sobic003G314700 Sobic003G314700 Sobic002G412700--Sobic003G314700 Sobic004G034700 Sobic004G034700 Sobic002G412700--Sobic004G034700 Sobic003G209400 Sobic003G209400 Sobic002G412700--Sobic003G209400 Sobic007G047600 Sobic007G047600 Sobic002G412700--Sobic007G047600 Sobic010G085200 Sobic010G085200 Sobic002G412700--Sobic010G085200 Sobic002G119600 Sobic002G119600 Sobic002G412700--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic002G412700--Sobic010G139500 Sobic006G010400 Sobic006G010400 Sobic001G251600--Sobic006G010400 Sobic001G251600--Sobic002G423500 SobicK004100 SobicK004100 Sobic001G251600--SobicK004100 Sobic001G251600--Sobic004G208500 Sobic001G145400 Sobic001G145400 Sobic001G251600--Sobic001G145400 Sobic009G249800 Sobic009G249800 Sobic001G251600--Sobic009G249800 Sobic001G251600--Sobic002G408900 Sobic001G251600--Sobic002G394600 Sobic001G251600--Sobic002G412700 Sobic010G269100 Sobic010G269100 Sobic003G099300--Sobic010G269100 Sobic004G039600 Sobic004G039600 Sobic003G099300--Sobic004G039600 Sobic005G216300 Sobic005G216300 Sobic003G099300--Sobic005G216300 Sobic003G099300--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic003G099300--Sobic001G369000 Sobic005G115500 Sobic005G115500 Sobic003G099300--Sobic005G115500 Sobic002G256200 Sobic002G256200 Sobic003G099300--Sobic002G256200 Sobic006G056200 Sobic006G056200 Sobic003G099300--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic003G099300--Sobic009G231700
Octagon: transcription factors


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