Gene annotation
Transcriptome id Sobic.004G326600.1
Synonym ATTCP-1, Sb04g035610, TCP-1
Functional annotation T-complex protein, putative, expressed
UniProt C5XUD0
Pfam PF00118
Panther DB PTHR11353
NCBI CDD -
KEGG Orthology K09493; CCT1, T-complex protein 1 subunit alpha
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G20050 : T-complex protein 1 alpha subunit
RAP-DB (Rice) LOC_Os04g46620.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) Zm00025a022433 , Zm00025a032964
Brachypodium KQK19679 , KQJ83949
Barley HORVU1Hr1G052730.18 , HORVU1Hr1G052730.19 , HORVU1Hr1G052730.10 , HORVU1Hr1G052730.11 , HORVU1Hr1G052730.12 , HORVU1Hr1G052730.13 , HORVU1Hr1G052730.14 , HORVU1Hr1G052730.16 , HORVU1Hr1G052730.17 , HORVU1Hr1G052730.8 , HORVU1Hr1G052730.9 , HORVU1Hr1G052730.2 , HORVU1Hr1G052730.3 , HORVU1Hr1G052730.1 , HORVU1Hr1G052730.6 , HORVU1Hr1G052730.7 , HORVU1Hr1G052730.4 , HORVU1Hr1G052730.5 , HORVU1Hr1G052730.29 , HORVU1Hr1G052730.28 , HORVU1Hr1G052730.25 , HORVU1Hr1G052730.24 , HORVU1Hr1G052730.27 , HORVU1Hr1G052730.26 , HORVU1Hr1G052730.21 , HORVU1Hr1G052730.20 , HORVU1Hr1G052730.23 , HORVU1Hr1G052730.22 , HORVU7Hr1G044070.4 , HORVU7Hr1G044070.2 , HORVU1Hr1G052730.41 , HORVU1Hr1G052730.47 , HORVU1Hr1G052730.45 , HORVU1Hr1G052730.44 , HORVU1Hr1G052730.43 , HORVU1Hr1G052730.40 , HORVU1Hr1G052730.32 , HORVU1Hr1G052730.33 , HORVU1Hr1G052730.30 , HORVU1Hr1G052730.31 , HORVU1Hr1G052730.36 , HORVU1Hr1G052730.37 , HORVU1Hr1G052730.34 , HORVU1Hr1G052730.35 , HORVU1Hr1G052730.38 , HORVU1Hr1G052730.39 , HORVU1Hr1G052730.48 , HORVU1Hr1G052730.15 , HORVU7Hr1G044070.1 , HORVU1Hr1G052730.46 , HORVU1Hr1G052730.42
Wheat TraesCS7A02G217200 , TraesCS1B02G218800 , TraesCS7D02G218500 , TraesCS7D02G218500 , TraesCS7D02G218500 , TraesCS7B02G124100 , TraesCS7B02G124100 , TraesCS1D02G208500 , TraesCS1A02G205200 , TraesCS7A02G062100 , TraesCS7A02G062100
Populus -


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cDNA sequences
Sobic.004G326600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
2 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
3 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
4 Sobic.001G091900 WD domain, G-beta repeat domain containing protein, expressed K15443: TRM82, tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
5 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
6 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
7 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
8 Sobic.002G143000 ubiquitin family protein, putative, expressed -
9 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
10 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
11 Sobic.004G252000 expressed protein K14545: ribosomal RNA-processing protein 7
12 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
13 Sobic.001G371100 nucleolar protein 5A, putative, expressed K14564: nucleolar protein 56
14 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta
15 Sobic.009G104100 peptidase, M24 family protein, putative, expressed -
16 Sobic.005G105500 expressed protein -
17 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
18 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
19 Sobic.003G160900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
20 Sobic.009G211700 ZOS5-12 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic004G326600 Sobic004G326600 Sobic004G047200 Sobic004G047200 Sobic004G326600--Sobic004G047200 Sobic002G014400 Sobic002G014400 Sobic004G326600--Sobic002G014400 Sobic002G423500 Sobic002G423500 Sobic004G326600--Sobic002G423500 Sobic001G091900 Sobic001G091900 Sobic004G326600--Sobic001G091900 Sobic004G215700 Sobic004G215700 Sobic004G326600--Sobic004G215700 Sobic002G341800 Sobic002G341800 Sobic004G326600--Sobic002G341800 Sobic005G163700 Sobic005G163700 Sobic004G326600--Sobic005G163700 Sobic002G143000 Sobic002G143000 Sobic004G326600--Sobic002G143000 Sobic001G458700 Sobic001G458700 Sobic004G326600--Sobic001G458700 Sobic004G047200--Sobic004G326600 Sobic004G047200--Sobic002G423500 Sobic004G047200--Sobic002G014400 Sobic001G008500 Sobic001G008500 Sobic004G047200--Sobic001G008500 Sobic004G047200--Sobic005G163700 Sobic001G530800 Sobic001G530800 Sobic004G047200--Sobic001G530800 Sobic004G047200--Sobic004G215700 Sobic001G460500 Sobic001G460500 Sobic004G047200--Sobic001G460500 Sobic001G371100 Sobic001G371100 Sobic004G047200--Sobic001G371100 Sobic002G014400--Sobic004G047200 Sobic002G014400--Sobic004G326600 Sobic002G014400--Sobic002G423500 Sobic002G014400--Sobic005G163700 Sobic002G014400--Sobic002G341800 Sobic002G014400--Sobic001G460500 Sobic002G394600 Sobic002G394600 Sobic002G014400--Sobic002G394600 Sobic006G044600 Sobic006G044600 Sobic002G014400--Sobic006G044600 Sobic001G251600 Sobic001G251600 Sobic002G014400--Sobic001G251600 Sobic002G423500--Sobic005G163700 Sobic002G423500--Sobic004G047200 Sobic002G423500--Sobic002G014400 Sobic002G423500--Sobic001G460500 Sobic002G423500--Sobic004G326600 Sobic002G423500--Sobic004G215700 Sobic001G522000 Sobic001G522000 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic001G467100 Sobic001G467100 Sobic002G423500--Sobic001G467100 Sobic001G091900--Sobic004G326600 Sobic003G160900 Sobic003G160900 Sobic001G091900--Sobic003G160900 Sobic009G190300 Sobic009G190300 Sobic001G091900--Sobic009G190300 Sobic006G056600 Sobic006G056600 Sobic001G091900--Sobic006G056600 Sobic001G481700 Sobic001G481700 Sobic001G091900--Sobic001G481700 Sobic009G211700 Sobic009G211700 Sobic001G091900--Sobic009G211700 Sobic001G091900--Sobic002G341800 Sobic001G091900--Sobic002G143000 Sobic001G091900--Sobic001G458700 Sobic004G215700--Sobic002G423500 Sobic004G215700--Sobic004G326600 Sobic004G215700--Sobic005G163700 Sobic006G024700 Sobic006G024700 Sobic004G215700--Sobic006G024700 Sobic004G215700--Sobic004G047200 Sobic004G215700--Sobic001G460500 Sobic003G008600 Sobic003G008600 Sobic004G215700--Sobic003G008600 Sobic003G388900 Sobic003G388900 Sobic004G215700--Sobic003G388900 Sobic004G212100 Sobic004G212100 Sobic004G215700--Sobic004G212100 Sobic002G341800--Sobic001G458700 Sobic001G404100 Sobic001G404100 Sobic002G341800--Sobic001G404100 Sobic002G341800--Sobic001G481700 Sobic007G176200 Sobic007G176200 Sobic002G341800--Sobic007G176200 Sobic002G341800--Sobic006G044600 Sobic002G341800--Sobic002G394600 Sobic005G105500 Sobic005G105500 Sobic002G341800--Sobic005G105500 Sobic008G137600 Sobic008G137600 Sobic002G341800--Sobic008G137600 Sobic004G081800 Sobic004G081800 Sobic002G341800--Sobic004G081800 Sobic005G163700--Sobic001G460500 Sobic005G163700--Sobic002G423500 Sobic005G163700--Sobic002G014400 Sobic005G163700--Sobic004G047200 Sobic005G163700--Sobic004G215700 Sobic005G163700--Sobic004G326600 Sobic005G163700--Sobic001G467100 Sobic004G208500 Sobic004G208500 Sobic005G163700--Sobic004G208500 Sobic002G412700 Sobic002G412700 Sobic005G163700--Sobic002G412700 Sobic010G057900 Sobic010G057900 Sobic002G143000--Sobic010G057900 Sobic002G143000--Sobic001G458700 Sobic002G143000--Sobic004G326600 Sobic002G143000--Sobic004G081800 Sobic002G143000--Sobic002G341800 Sobic002G143000--Sobic005G105500 Sobic002G143000--Sobic006G056600 Sobic002G143000--Sobic001G091900 Sobic002G268400 Sobic002G268400 Sobic002G143000--Sobic002G268400 Sobic001G458700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G458700--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G458700--Sobic001G010700 Sobic001G458700--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic001G458700--Sobic004G224900 Sobic003G330500 Sobic003G330500 Sobic001G458700--Sobic003G330500 Sobic001G283200 Sobic001G283200 Sobic001G458700--Sobic001G283200 Sobic001G502200 Sobic001G502200 Sobic001G458700--Sobic001G502200 Sobic001G458700--Sobic004G081800
Octagon: transcription factors


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