Gene annotation
Transcriptome id Sobic.001G530800.1
Synonym Sb01g049370
Functional annotation T-complex protein, putative, expressed
UniProt C5X0Z6
Pfam PF00118
Panther DB PTHR11353
NCBI CDD -
KEGG Orthology K09496; T-complex protein 1 subunit delta
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G18190 : TCP-1/cpn60 chaperonin family protein
RAP-DB (Rice) LOC_Os02g22780.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) Zm00025a032627 , Zm00025a000248
Brachypodium KQJ94576 , PNT66433
Barley HORVU7Hr1G034140.4 , HORVU7Hr1G034140.3 , HORVU7Hr1G034140.2 , HORVU7Hr1G034140.1
Wheat TraesCS7A02G426400 , TraesCS7B02G068100 , TraesCS6B02G391500 , TraesCS7D02G164400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
2 Sobic.001G214900 expressed protein -
3 Sobic.001G026600 - -
4 Sobic.001G371100 nucleolar protein 5A, putative, expressed K14564: nucleolar protein 56
5 Sobic.009G234400 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
6 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
7 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
8 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
9 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
10 Sobic.003G118400 expressed protein -
11 Sobic.004G326600 T-complex protein, putative, expressed K09493: CCT1, T-complex protein 1 subunit alpha
12 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
13 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
14 Sobic.006G041100 nuclear transport factor 2, putative, expressed -
15 Sobic.005G105500 expressed protein -
16 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
17 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
18 Sobic.002G313600 src homology-3 domain protein 3, putative, expressed -
19 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
20 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L


Gene co-expression network
sample Sobic001G530800 Sobic001G530800 Sobic004G047200 Sobic004G047200 Sobic001G530800--Sobic004G047200 Sobic001G214900 Sobic001G214900 Sobic001G530800--Sobic001G214900 Sobic001G026600 Sobic001G026600 Sobic001G530800--Sobic001G026600 Sobic001G371100 Sobic001G371100 Sobic001G530800--Sobic001G371100 Sobic009G234400 Sobic009G234400 Sobic001G530800--Sobic009G234400 Sobic002G423500 Sobic002G423500 Sobic001G530800--Sobic002G423500 Sobic002G054000 Sobic002G054000 Sobic001G530800--Sobic002G054000 Sobic001G196100 Sobic001G196100 Sobic001G530800--Sobic001G196100 Sobic010G277000 Sobic010G277000 Sobic001G530800--Sobic010G277000 Sobic004G326600 Sobic004G326600 Sobic004G047200--Sobic004G326600 Sobic004G047200--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic004G047200--Sobic002G014400 Sobic001G008500 Sobic001G008500 Sobic004G047200--Sobic001G008500 Sobic005G163700 Sobic005G163700 Sobic004G047200--Sobic005G163700 Sobic004G047200--Sobic001G530800 Sobic004G215700 Sobic004G215700 Sobic004G047200--Sobic004G215700 Sobic001G460500 Sobic001G460500 Sobic004G047200--Sobic001G460500 Sobic004G047200--Sobic001G371100 Sobic001G060300 Sobic001G060300 Sobic001G214900--Sobic001G060300 Sobic002G367800 Sobic002G367800 Sobic001G214900--Sobic002G367800 Sobic003G261100 Sobic003G261100 Sobic001G214900--Sobic003G261100 Sobic003G205400 Sobic003G205400 Sobic001G214900--Sobic003G205400 Sobic010G134100 Sobic010G134100 Sobic001G214900--Sobic010G134100 Sobic001G214900--Sobic010G277000 Sobic007G143000 Sobic007G143000 Sobic001G214900--Sobic007G143000 Sobic002G402500 Sobic002G402500 Sobic001G214900--Sobic002G402500 Sobic001G214900--Sobic001G530800 Sobic001G026600--Sobic001G530800 Sobic007G044400 Sobic007G044400 Sobic001G026600--Sobic007G044400 Sobic001G026600--Sobic010G277000 Sobic001G026600--Sobic001G196100 Sobic001G116000 Sobic001G116000 Sobic001G026600--Sobic001G116000 Sobic008G084100 Sobic008G084100 Sobic001G026600--Sobic008G084100 Sobic003G319000 Sobic003G319000 Sobic001G026600--Sobic003G319000 Sobic002G313600 Sobic002G313600 Sobic001G026600--Sobic002G313600 Sobic001G436100 Sobic001G436100 Sobic001G026600--Sobic001G436100 Sobic010G032700 Sobic010G032700 Sobic001G371100--Sobic010G032700 Sobic001G081900 Sobic001G081900 Sobic001G371100--Sobic001G081900 Sobic001G397000 Sobic001G397000 Sobic001G371100--Sobic001G397000 Sobic001G371100--Sobic001G530800 Sobic006G251600 Sobic006G251600 Sobic001G371100--Sobic006G251600 Sobic001G371100--Sobic004G047200 Sobic008G083400 Sobic008G083400 Sobic001G371100--Sobic008G083400 Sobic004G082700 Sobic004G082700 Sobic001G371100--Sobic004G082700 Sobic001G228200 Sobic001G228200 Sobic001G371100--Sobic001G228200 Sobic009G212300 Sobic009G212300 Sobic009G234400--Sobic009G212300 Sobic006G211800 Sobic006G211800 Sobic009G234400--Sobic006G211800 Sobic002G341800 Sobic002G341800 Sobic009G234400--Sobic002G341800 Sobic001G404100 Sobic001G404100 Sobic009G234400--Sobic001G404100 Sobic005G105500 Sobic005G105500 Sobic009G234400--Sobic005G105500 Sobic003G028100 Sobic003G028100 Sobic009G234400--Sobic003G028100 Sobic001G481700 Sobic001G481700 Sobic009G234400--Sobic001G481700 Sobic006G231500 Sobic006G231500 Sobic009G234400--Sobic006G231500 Sobic002G087000 Sobic002G087000 Sobic009G234400--Sobic002G087000 Sobic002G423500--Sobic005G163700 Sobic002G423500--Sobic004G047200 Sobic002G423500--Sobic002G014400 Sobic002G423500--Sobic001G460500 Sobic002G423500--Sobic004G326600 Sobic002G423500--Sobic004G215700 Sobic001G522000 Sobic001G522000 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic001G467100 Sobic001G467100 Sobic002G423500--Sobic001G467100 Sobic008G135000 Sobic008G135000 Sobic002G054000--Sobic008G135000 Sobic009G233400 Sobic009G233400 Sobic002G054000--Sobic009G233400 Sobic001G058900 Sobic001G058900 Sobic002G054000--Sobic001G058900 Sobic005G050500 Sobic005G050500 Sobic002G054000--Sobic005G050500 Sobic001G334300 Sobic001G334300 Sobic002G054000--Sobic001G334300 Sobic002G304900 Sobic002G304900 Sobic002G054000--Sobic002G304900 Sobic004G342400 Sobic004G342400 Sobic002G054000--Sobic004G342400 Sobic009G191200 Sobic009G191200 Sobic002G054000--Sobic009G191200 Sobic010G005300 Sobic010G005300 Sobic002G054000--Sobic010G005300 Sobic001G196100--Sobic001G116000 Sobic001G196100--Sobic007G044400 Sobic001G281900 Sobic001G281900 Sobic001G196100--Sobic001G281900 Sobic001G035400 Sobic001G035400 Sobic001G196100--Sobic001G035400 Sobic001G418000 Sobic001G418000 Sobic001G196100--Sobic001G418000 Sobic001G196100--Sobic002G087000 Sobic001G196100--Sobic003G319000 Sobic003G322300 Sobic003G322300 Sobic001G196100--Sobic003G322300 Sobic001G196100--Sobic001G530800 Sobic010G277000--Sobic008G084100 Sobic007G191600 Sobic007G191600 Sobic010G277000--Sobic007G191600 Sobic010G277000--Sobic001G035400 Sobic010G277000--Sobic001G214900 Sobic003G238500 Sobic003G238500 Sobic010G277000--Sobic003G238500 Sobic010G277000--Sobic001G026600 Sobic010G277000--Sobic002G054000 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300
Octagon: transcription factors


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