Gene annotation
Transcriptome id Sobic.003G118400.2,Sobic.003G118400.1
Synonym Sb03g009990
Functional annotation expressed protein
UniProt C5XGE5
Pfam -
Panther DB PTHR36407 PTHR36407:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64680 : -
RAP-DB (Rice) LOC_Os01g15520.1 : expressed protein
MaizeGDB (Corn) Zm00025a023973
Brachypodium KQK03706 , KQK03705
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G118400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254500 oxidoreductase, putative, expressed K18160: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
2 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
3 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta
4 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
5 Sobic.002G116500 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
6 Sobic.003G125100 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.009G169200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
8 Sobic.006G094600 LSM domain containing protein, expressed K12620: U6 snRNA-associated Sm-like protein LSm1
9 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
10 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
11 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
12 Sobic.008G111700 expressed protein -
13 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
14 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
15 Sobic.001G448200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
16 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
17 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
18 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
19 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
20 Sobic.001G250300 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase


Gene co-expression network
sample Sobic003G118400 Sobic003G118400 Sobic002G254500 Sobic002G254500 Sobic003G118400--Sobic002G254500 Sobic001G382200 Sobic001G382200 Sobic003G118400--Sobic001G382200 Sobic001G530800 Sobic001G530800 Sobic003G118400--Sobic001G530800 Sobic004G249300 Sobic004G249300 Sobic003G118400--Sobic004G249300 Sobic002G116500 Sobic002G116500 Sobic003G118400--Sobic002G116500 Sobic003G125100 Sobic003G125100 Sobic003G118400--Sobic003G125100 Sobic009G169200 Sobic009G169200 Sobic003G118400--Sobic009G169200 Sobic006G094600 Sobic006G094600 Sobic003G118400--Sobic006G094600 Sobic003G222700 Sobic003G222700 Sobic003G118400--Sobic003G222700 Sobic002G254500--Sobic003G118400 Sobic006G029400 Sobic006G029400 Sobic002G254500--Sobic006G029400 Sobic001G116000 Sobic001G116000 Sobic002G254500--Sobic001G116000 Sobic007G022700 Sobic007G022700 Sobic002G254500--Sobic007G022700 Sobic010G277000 Sobic010G277000 Sobic002G254500--Sobic010G277000 Sobic001G460500 Sobic001G460500 Sobic002G254500--Sobic001G460500 Sobic009G207200 Sobic009G207200 Sobic002G254500--Sobic009G207200 Sobic001G035400 Sobic001G035400 Sobic002G254500--Sobic001G035400 Sobic002G423500 Sobic002G423500 Sobic002G254500--Sobic002G423500 Sobic009G258500 Sobic009G258500 Sobic001G382200--Sobic009G258500 Sobic009G201800 Sobic009G201800 Sobic001G382200--Sobic009G201800 Sobic001G382200--Sobic003G118400 Sobic002G341800 Sobic002G341800 Sobic001G382200--Sobic002G341800 Sobic009G234400 Sobic009G234400 Sobic001G382200--Sobic009G234400 Sobic002G394600 Sobic002G394600 Sobic001G382200--Sobic002G394600 Sobic008G016100 Sobic008G016100 Sobic001G382200--Sobic008G016100 Sobic004G010700 Sobic004G010700 Sobic001G382200--Sobic004G010700 Sobic001G382200--Sobic001G530800 Sobic004G047200 Sobic004G047200 Sobic001G530800--Sobic004G047200 Sobic001G214900 Sobic001G214900 Sobic001G530800--Sobic001G214900 Sobic001G026600 Sobic001G026600 Sobic001G530800--Sobic001G026600 Sobic001G371100 Sobic001G371100 Sobic001G530800--Sobic001G371100 Sobic001G530800--Sobic009G234400 Sobic001G530800--Sobic002G423500 Sobic002G054000 Sobic002G054000 Sobic001G530800--Sobic002G054000 Sobic001G196100 Sobic001G196100 Sobic001G530800--Sobic001G196100 Sobic001G530800--Sobic010G277000 Sobic004G249300--Sobic002G341800 Sobic004G249300--Sobic009G201800 Sobic001G115500 Sobic001G115500 Sobic004G249300--Sobic001G115500 Sobic002G077900 Sobic002G077900 Sobic004G249300--Sobic002G077900 Sobic008G083400 Sobic008G083400 Sobic004G249300--Sobic008G083400 Sobic010G247400 Sobic010G247400 Sobic004G249300--Sobic010G247400 Sobic004G249300--Sobic003G118400 Sobic009G102900 Sobic009G102900 Sobic004G249300--Sobic009G102900 Sobic001G370300 Sobic001G370300 Sobic004G249300--Sobic001G370300 Sobic001G193500 Sobic001G193500 Sobic002G116500--Sobic001G193500 Sobic002G116500--Sobic008G016100 Sobic002G116500--Sobic003G118400 Sobic004G247100 Sobic004G247100 Sobic002G116500--Sobic004G247100 Sobic002G116500--Sobic001G382200 Sobic003G408300 Sobic003G408300 Sobic002G116500--Sobic003G408300 Sobic006G084000 Sobic006G084000 Sobic002G116500--Sobic006G084000 Sobic002G144275 Sobic002G144275 Sobic002G116500--Sobic002G144275 Sobic009G195700 Sobic009G195700 Sobic002G116500--Sobic009G195700 Sobic001G061200 Sobic001G061200 Sobic003G125100--Sobic001G061200 Sobic003G125100--Sobic003G118400 Sobic008G111700 Sobic008G111700 Sobic003G125100--Sobic008G111700 Sobic003G125100--Sobic006G094600 Sobic003G125100--Sobic009G207200 Sobic006G257001 Sobic006G257001 Sobic003G125100--Sobic006G257001 Sobic001G404200 Sobic001G404200 Sobic003G125100--Sobic001G404200 Sobic001G499000 Sobic001G499000 Sobic003G125100--Sobic001G499000 Sobic002G029300 Sobic002G029300 Sobic003G125100--Sobic002G029300 Sobic009G169200--Sobic003G118400 Sobic006G143500 Sobic006G143500 Sobic009G169200--Sobic006G143500 Sobic003G109200 Sobic003G109200 Sobic009G169200--Sobic003G109200 Sobic007G043400 Sobic007G043400 Sobic009G169200--Sobic007G043400 Sobic001G286100 Sobic001G286100 Sobic009G169200--Sobic001G286100 Sobic001G285300 Sobic001G285300 Sobic009G169200--Sobic001G285300 Sobic009G169200--Sobic006G029400 Sobic009G169200--Sobic002G054000 Sobic002G304400 Sobic002G304400 Sobic009G169200--Sobic002G304400 Sobic008G137600 Sobic008G137600 Sobic006G094600--Sobic008G137600 Sobic006G011000 Sobic006G011000 Sobic006G094600--Sobic006G011000 Sobic003G131300 Sobic003G131300 Sobic006G094600--Sobic003G131300 Sobic001G294900 Sobic001G294900 Sobic006G094600--Sobic001G294900 Sobic001G126200 Sobic001G126200 Sobic006G094600--Sobic001G126200 Sobic006G183000 Sobic006G183000 Sobic006G094600--Sobic006G183000 Sobic006G094600--Sobic001G285300 Sobic002G428200 Sobic002G428200 Sobic006G094600--Sobic002G428200 Sobic010G205300 Sobic010G205300 Sobic006G094600--Sobic010G205300 Sobic004G256300 Sobic004G256300 Sobic003G222700--Sobic004G256300 Sobic001G467100 Sobic001G467100 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic003G222700--Sobic001G061200 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic001G229300 Sobic001G229300 Sobic003G222700--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900
Octagon: transcription factors


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