Gene annotation
Transcriptome id Sobic.002G116500.1
Synonym Sb02g009910
Functional annotation methyltransferase, putative, expressed
UniProt C5X4E1
Pfam PF13489
Panther DB PTHR22809 PTHR22809:SF5
NCBI CDD KOG2361; Predicted methyltransferase
KEGG Orthology K00599; methyltransferase-like protein 6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G54650 : Methyltransferase family protein
RAP-DB (Rice) LOC_Os07g23169.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a045731
Brachypodium -
Barley -
Wheat TraesCS7B02G110800 , TraesCS7A02G203800 , TraesCS7D02G206900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G193500 DnaK family protein, putative, expressed K04043: dnaK, molecular chaperone DnaK
2 Sobic.008G016100 WD domain, G-beta repeat domain containing protein, expressed K14848: RRB1, ribosome assembly protein RRB1
3 Sobic.003G118400 expressed protein -
4 Sobic.004G247100 peptidase, putative, expressed -
5 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
6 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
7 Sobic.006G084000 CDK5RAP1, putative, expressed K15865: threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1
8 Sobic.002G144275 - -
9 Sobic.009G195700 hydrolase, alpha/beta fold family domain containing protein, expressed K01259: proline iminopeptidase
10 Sobic.002G242700 expressed protein K15202: GTF3C5, general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
11 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
12 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
13 Sobic.009G258500 notchless protein, putative, expressed K14855: RSA4, ribosome assembly protein 4
14 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
15 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
16 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
17 Sobic.001G471000 RNase L inhibitor protein-related, putative, expressed K09140: pre-rRNA-processing protein TSR3
18 Sobic.004G322300 nucleotide binding protein, putative, expressed K03351: anaphase-promoting complex subunit 4
19 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -
20 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta


Gene co-expression network
sample Sobic002G116500 Sobic002G116500 Sobic001G193500 Sobic001G193500 Sobic002G116500--Sobic001G193500 Sobic008G016100 Sobic008G016100 Sobic002G116500--Sobic008G016100 Sobic003G118400 Sobic003G118400 Sobic002G116500--Sobic003G118400 Sobic004G247100 Sobic004G247100 Sobic002G116500--Sobic004G247100 Sobic001G382200 Sobic001G382200 Sobic002G116500--Sobic001G382200 Sobic003G408300 Sobic003G408300 Sobic002G116500--Sobic003G408300 Sobic006G084000 Sobic006G084000 Sobic002G116500--Sobic006G084000 Sobic002G144275 Sobic002G144275 Sobic002G116500--Sobic002G144275 Sobic009G195700 Sobic009G195700 Sobic002G116500--Sobic009G195700 Sobic010G169300 Sobic010G169300 Sobic001G193500--Sobic010G169300 Sobic001G193500--Sobic002G116500 Sobic002G014400 Sobic002G014400 Sobic001G193500--Sobic002G014400 Sobic007G177300 Sobic007G177300 Sobic001G193500--Sobic007G177300 Sobic001G193500--Sobic008G016100 Sobic001G471000 Sobic001G471000 Sobic001G193500--Sobic001G471000 Sobic001G467100 Sobic001G467100 Sobic001G193500--Sobic001G467100 Sobic009G077600 Sobic009G077600 Sobic001G193500--Sobic009G077600 Sobic005G163700 Sobic005G163700 Sobic001G193500--Sobic005G163700 Sobic008G016100--Sobic003G408300 Sobic008G016100--Sobic002G116500 Sobic008G016100--Sobic001G382200 Sobic006G135900 Sobic006G135900 Sobic008G016100--Sobic006G135900 Sobic009G258500 Sobic009G258500 Sobic008G016100--Sobic009G258500 Sobic008G016100--Sobic001G193500 Sobic008G016100--Sobic001G471000 Sobic009G219400 Sobic009G219400 Sobic008G016100--Sobic009G219400 Sobic001G007800 Sobic001G007800 Sobic008G016100--Sobic001G007800 Sobic002G254500 Sobic002G254500 Sobic003G118400--Sobic002G254500 Sobic003G118400--Sobic001G382200 Sobic001G530800 Sobic001G530800 Sobic003G118400--Sobic001G530800 Sobic004G249300 Sobic004G249300 Sobic003G118400--Sobic004G249300 Sobic003G118400--Sobic002G116500 Sobic003G125100 Sobic003G125100 Sobic003G118400--Sobic003G125100 Sobic009G169200 Sobic009G169200 Sobic003G118400--Sobic009G169200 Sobic006G094600 Sobic006G094600 Sobic003G118400--Sobic006G094600 Sobic003G222700 Sobic003G222700 Sobic003G118400--Sobic003G222700 Sobic006G212900 Sobic006G212900 Sobic004G247100--Sobic006G212900 Sobic004G247100--Sobic001G467100 Sobic004G247100--Sobic009G195700 Sobic007G047600 Sobic007G047600 Sobic004G247100--Sobic007G047600 Sobic004G247100--Sobic002G116500 Sobic007G145400 Sobic007G145400 Sobic004G247100--Sobic007G145400 Sobic007G051400 Sobic007G051400 Sobic004G247100--Sobic007G051400 Sobic007G102500 Sobic007G102500 Sobic004G247100--Sobic007G102500 Sobic001G461300 Sobic001G461300 Sobic004G247100--Sobic001G461300 Sobic001G382200--Sobic009G258500 Sobic009G201800 Sobic009G201800 Sobic001G382200--Sobic009G201800 Sobic001G382200--Sobic003G118400 Sobic002G341800 Sobic002G341800 Sobic001G382200--Sobic002G341800 Sobic009G234400 Sobic009G234400 Sobic001G382200--Sobic009G234400 Sobic002G394600 Sobic002G394600 Sobic001G382200--Sobic002G394600 Sobic001G382200--Sobic008G016100 Sobic004G010700 Sobic004G010700 Sobic001G382200--Sobic004G010700 Sobic001G382200--Sobic001G530800 Sobic003G408300--Sobic008G016100 Sobic002G263200 Sobic002G263200 Sobic003G408300--Sobic002G263200 Sobic007G187900 Sobic007G187900 Sobic003G408300--Sobic007G187900 Sobic003G408300--Sobic002G116500 Sobic001G168100 Sobic001G168100 Sobic003G408300--Sobic001G168100 Sobic003G408300--Sobic006G084000 Sobic002G332200 Sobic002G332200 Sobic003G408300--Sobic002G332200 Sobic006G251500 Sobic006G251500 Sobic003G408300--Sobic006G251500 Sobic009G143800 Sobic009G143800 Sobic003G408300--Sobic009G143800 Sobic006G269900 Sobic006G269900 Sobic006G084000--Sobic006G269900 Sobic008G160000 Sobic008G160000 Sobic006G084000--Sobic008G160000 Sobic006G010400 Sobic006G010400 Sobic006G084000--Sobic006G010400 Sobic003G407600 Sobic003G407600 Sobic006G084000--Sobic003G407600 Sobic004G224600 Sobic004G224600 Sobic006G084000--Sobic004G224600 Sobic001G259000 Sobic001G259000 Sobic006G084000--Sobic001G259000 Sobic003G382500 Sobic003G382500 Sobic006G084000--Sobic003G382500 Sobic010G247400 Sobic010G247400 Sobic006G084000--Sobic010G247400 Sobic009G246500 Sobic009G246500 Sobic006G084000--Sobic009G246500 Sobic001G402300 Sobic001G402300 Sobic002G144275--Sobic001G402300 Sobic010G179700 Sobic010G179700 Sobic002G144275--Sobic010G179700 Sobic006G043700 Sobic006G043700 Sobic002G144275--Sobic006G043700 Sobic008G137600 Sobic008G137600 Sobic002G144275--Sobic008G137600 Sobic002G131400 Sobic002G131400 Sobic002G144275--Sobic002G131400 Sobic002G144275--Sobic002G116500 Sobic003G273400 Sobic003G273400 Sobic002G144275--Sobic003G273400 Sobic007G220900 Sobic007G220900 Sobic002G144275--Sobic007G220900 Sobic008G110500 Sobic008G110500 Sobic002G144275--Sobic008G110500 Sobic009G195700--Sobic004G247100 Sobic009G195700--Sobic006G212900 Sobic002G142700 Sobic002G142700 Sobic009G195700--Sobic002G142700 Sobic001G403400 Sobic001G403400 Sobic009G195700--Sobic001G403400 Sobic009G195700--Sobic002G116500 Sobic008G059900 Sobic008G059900 Sobic009G195700--Sobic008G059900 Sobic001G004100 Sobic001G004100 Sobic009G195700--Sobic001G004100 Sobic010G073500 Sobic010G073500 Sobic009G195700--Sobic010G073500 Sobic010G172400 Sobic010G172400 Sobic009G195700--Sobic010G172400
Octagon: transcription factors


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